From aeddf57fc7f0af61e51c6fe5f39a22c58b1c9cb9 Mon Sep 17 00:00:00 2001 From: Timo Schadt Date: Mon, 8 Jan 2024 13:27:16 +0100 Subject: [PATCH 1/8] Fix Tensorflo 2.15 import error --- niceml/dlframeworks/keras/callbacks/modelcheckpoint.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/niceml/dlframeworks/keras/callbacks/modelcheckpoint.py b/niceml/dlframeworks/keras/callbacks/modelcheckpoint.py index f04133d6..a016a8f9 100644 --- a/niceml/dlframeworks/keras/callbacks/modelcheckpoint.py +++ b/niceml/dlframeworks/keras/callbacks/modelcheckpoint.py @@ -6,7 +6,7 @@ from fsspec import AbstractFileSystem from keras.callbacks import ModelCheckpoint as ModelCheckpointKeras -from keras.utils import io_utils, tf_utils +from keras.src.utils import io_utils, tf_utils from niceml.utilities.fsspec.locationutils import LocationConfig, open_location From 56aef129cac1e9882eb5d715a9ab3fbac1cae576 Mon Sep 17 00:00:00 2001 From: Timo Schadt Date: Mon, 8 Jan 2024 13:28:24 +0100 Subject: [PATCH 2/8] Update Dagster to Version ~1.5 --- poetry.lock | 128 ++++++++++++++++++++----------------------------- pyproject.toml | 6 +-- 2 files changed, 55 insertions(+), 79 deletions(-) diff --git a/poetry.lock b/poetry.lock index e6c875b1..0268b347 100644 --- a/poetry.lock +++ b/poetry.lock @@ -751,16 +751,6 @@ files = [ {file = "cramjam-2.7.0-cp311-cp311-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:0b48b11c328d91250dadc63c00753f5ba26eb9df5fe75ba2ce8a78631260479d"}, {file = "cramjam-2.7.0-cp311-none-win32.whl", hash = "sha256:bef07e7d4607c4d70627e58eb630fe60e48b80a61ab05b33314e3296eb90af78"}, {file = "cramjam-2.7.0-cp311-none-win_amd64.whl", hash = "sha256:3f2e41dc8143d0e88ec9ba3ff66c8d2aea486b04931119abe9e394f9961d74bc"}, - 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This framework streamlines the development, and maintenance of machine learning models, providing an end-to-end solution for building efficient and scalable pipelines." authors = [ "Denis Stalz-John ", @@ -55,7 +55,7 @@ scikit-learn = "^1.2.2" pandera = "^0.14.5" schema = "^0.7.5" copier = "^7.2.0" -dagster = "~1.4.14" +dagster = "~1.5" tornado = "^6.3.2" networkx = "^3.1" mkdocs-gen-files = "^0.5.0" @@ -74,7 +74,7 @@ tensorflow = {version = "~2.12.0", optional = true} tensorflow-metal = {version = "~1.0.0", optional = true} requests = "^2.31.0" cryptography = "^41.0.0" -dagster-mlflow = "^0.20.14" +dagster-mlflow = "~0.21" grpcio = "1.55.3" pendulum = "^2.0" tensorflow-io-gcs-filesystem = {version = "~0.33.0", optional = true} From f93a0371a249b407ae74c2d5a2feb2b6fd6f5ca1 Mon Sep 17 00:00:00 2001 From: Timo Schadt Date: Thu, 11 Jan 2024 09:16:27 +0100 Subject: [PATCH 3/8] Correct dagster version selection --- poetry.lock | 2 +- pyproject.toml | 4 ++-- 2 files changed, 3 insertions(+), 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{file = "importlib_metadata-6.11.0.tar.gz", hash = "sha256:1231cf92d825c9e03cfc4da076a16de6422c863558229ea0b22b675657463443"}, + {file = "importlib_metadata-7.0.1-py3-none-any.whl", hash = "sha256:4805911c3a4ec7c3966410053e9ec6a1fecd629117df5adee56dfc9432a1081e"}, + {file = "importlib_metadata-7.0.1.tar.gz", hash = "sha256:f238736bb06590ae52ac1fab06a3a9ef1d8dce2b7a35b5ab329371d6c8f5d2cc"}, ] [package.dependencies] @@ -2349,7 +2351,7 @@ testing = ["coverage", "pyyaml"] name = "markdown-it-py" version = "3.0.0" description = "Python port of markdown-it. Markdown parsing, done right!" -optional = true +optional = false python-versions = ">=3.8" files = [ {file = "markdown-it-py-3.0.0.tar.gz", hash = "sha256:e3f60a94fa066dc52ec76661e37c851cb232d92f9886b15cb560aaada2df8feb"}, @@ -2491,7 +2493,7 @@ python-dateutil = ">=2.7" name = "mdurl" version = "0.1.2" description = "Markdown URL utilities" -optional = true +optional = false python-versions = ">=3.7" files = [ {file = "mdurl-0.1.2-py3-none-any.whl", hash = "sha256:84008a41e51615a49fc9966191ff91509e3c40b939176e643fd50a5c2196b8f8"}, @@ -4353,7 +4355,7 @@ idna2008 = ["idna"] name = "rich" version = "13.7.0" description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal" -optional = true +optional = false python-versions = ">=3.7.0" files = [ {file = "rich-13.7.0-py3-none-any.whl", hash = "sha256:6da14c108c4866ee9520bbffa71f6fe3962e193b7da68720583850cd4548e235"}, @@ -4820,13 +4822,13 @@ test = ["pytest", "pytest-cov"] [[package]] name = "starlette" -version = "0.34.0" +version = "0.35.1" description = "The little ASGI library that shines." optional = false python-versions = ">=3.8" files = [ - {file = "starlette-0.34.0-py3-none-any.whl", hash = "sha256:2e14ee943f2df59eb8c141326240ce601643f1a97b577db44634f6d05d368c37"}, - {file = "starlette-0.34.0.tar.gz", hash = "sha256:ed050aaf3896945bfaae93bdf337e53ef3f29115a9d9c153e402985115cd9c8e"}, + {file = "starlette-0.35.1-py3-none-any.whl", hash = "sha256:50bbbda9baa098e361f398fda0928062abbaf1f54f4fadcbe17c092a01eb9a25"}, + {file = "starlette-0.35.1.tar.gz", hash = "sha256:3e2639dac3520e4f58734ed22553f950d3f3cb1001cd2eaac4d57e8cdc5f66bc"}, ] [package.dependencies] @@ -4838,13 +4840,13 @@ full = ["httpx (>=0.22.0)", "itsdangerous", "jinja2", "python-multipart", "pyyam [[package]] name = "streamlit" -version = "1.29.0" +version = "1.30.0" description = "A faster way to build and share data apps" optional = true python-versions = ">=3.8, !=3.9.7" files = [ - {file = "streamlit-1.29.0-py2.py3-none-any.whl", hash = "sha256:753510edb5bb831af0e3bdacd353c879ad5b4f0211e7efa0ec378809464868b4"}, - {file = "streamlit-1.29.0.tar.gz", hash = "sha256:b6dfff9c5e132e5518c92150efcd452980db492a45fafeac3d4688d2334efa07"}, + {file = "streamlit-1.30.0-py2.py3-none-any.whl", hash = "sha256:536494a4edfe9b66ed70c437176cfd6c7e36b1d99d0587b0be64245fa89c241b"}, + {file = "streamlit-1.30.0.tar.gz", hash = "sha256:90333915d9df8ce3b06de31b8a5bbab51e8cf0982dc6c32da9d6b1f2b4a9fa78"}, ] [package.dependencies] @@ -4853,7 +4855,7 @@ blinker = ">=1.0.0,<2" cachetools = ">=4.0,<6" click = ">=7.0,<9" gitpython = ">=3.0.7,<3.1.19 || >3.1.19,<4" -importlib-metadata = ">=1.4,<7" +importlib-metadata = ">=1.4,<8" numpy = ">=1.19.3,<2" packaging = ">=16.8,<24" pandas = ">=1.3.0,<3" @@ -4875,6 +4877,23 @@ watchdog = {version = ">=2.1.5", markers = "platform_system != \"Darwin\""} [package.extras] snowflake = ["snowflake-connector-python (>=2.8.0)", "snowflake-snowpark-python (>=0.9.0)"] +[[package]] +name = "structlog" +version = "24.1.0" +description = "Structured Logging for Python" +optional = false +python-versions = ">=3.8" +files = [ + {file = "structlog-24.1.0-py3-none-any.whl", hash = "sha256:3f6efe7d25fab6e86f277713c218044669906537bb717c1807a09d46bca0714d"}, + {file = "structlog-24.1.0.tar.gz", hash = "sha256:41a09886e4d55df25bdcb9b5c9674bccfab723ff43e0a86a1b7b236be8e57b16"}, +] + +[package.extras] +dev = ["structlog[tests,typing]"] +docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-mermaid", "sphinxext-opengraph", "twisted"] +tests = ["freezegun (>=0.2.8)", "pretend", "pytest (>=6.0)", "pytest-asyncio (>=0.17)", "simplejson"] +typing = ["mypy (>=1.4)", "rich", "twisted"] + [[package]] name = "tabulate" version = "0.9.0" @@ -5924,4 +5943,4 @@ visu = ["altair", "streamlit"] [metadata] lock-version = "2.0" python-versions = ">=3.9,<3.9.7 || >3.9.7,<3.12" -content-hash = "00d5795d629f6bebe4db152e9878979d45a91bb33b07c5ddbc38310df91a0233" +content-hash = "64eaee9af19f3c57b60f7c470383742b9a06331dfe0238d5f5e835ae9ec7e970" diff --git a/pyproject.toml b/pyproject.toml index aaf28755..dff7e77d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -55,7 +55,7 @@ scikit-learn = "^1.2.2" pandera = "^0.14.5" schema = "^0.7.5" copier = "^7.2.0" -dagster = "~1.5.14" +dagster = "~1.6.0" tornado = "^6.3.2" networkx = "^3.1" mkdocs-gen-files = "^0.5.0" @@ -70,11 +70,11 @@ protobuf = "^3.0.0" altair = {version = "^4.2.2", optional = true} tensorflow-macos = {version = "~2.15.0", optional = true} streamlit = {version = "^1.28.0", optional = true} -tensorflow = {version = "~2.15.0", optional = true} -tensorflow-metal = {version = "~1.1.0", optional = true} +tensorflow = {version = ">=2.13,<=2.15", optional = true} +tensorflow-metal = {version = "^1.0.0", optional = true} requests = "^2.31.0" cryptography = "^41.0.0" -dagster-mlflow = "~0.21.14" +dagster-mlflow = "~0.22.0" grpcio = "1.55.3" pendulum = "^2.0" tensorflow-io-gcs-filesystem = {version = "~0.33.0", optional = true} From 6fb2166b612a67091564d50284aa77e2d746f2f8 Mon Sep 17 00:00:00 2001 From: Timo Schadt Date: Fri, 12 Jan 2024 14:04:30 +0100 Subject: [PATCH 7/8] Change Tensorflow-macos version to >=2.13, <=2.15 --- poetry.lock | 8 ++++---- pyproject.toml | 2 +- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/poetry.lock b/poetry.lock index 1cde4dbe..0e039157 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2740,8 +2740,8 @@ files = [ [package.dependencies] numpy = [ - {version = ">=1.21.2", markers = "python_version > \"3.9\" and python_version <= \"3.10\""}, {version = ">1.20", markers = "python_version <= \"3.9\""}, + {version = ">=1.21.2", markers = "python_version > \"3.9\" and python_version <= \"3.10\""}, {version = ">=1.23.3", markers = "python_version > \"3.10\""}, ] @@ -3067,8 +3067,8 @@ files = [ [package.dependencies] numpy = [ - {version = ">=1.19.3", markers = "platform_system == \"Linux\" and platform_machine == \"aarch64\" and python_version >= \"3.8\" and python_version < \"3.10\" or python_version > \"3.9\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_system != \"Darwin\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_machine != \"arm64\" and python_version < \"3.10\""}, {version = ">=1.21.0", markers = "python_version == \"3.9\" and platform_system == \"Darwin\" and platform_machine == \"arm64\""}, + {version = ">=1.19.3", markers = "platform_system == \"Linux\" and platform_machine == \"aarch64\" and python_version >= \"3.8\" and python_version < \"3.10\" or python_version > \"3.9\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_system != \"Darwin\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_machine != \"arm64\" and python_version < \"3.10\""}, {version = ">=1.23.5", markers = "python_version >= \"3.11\""}, {version = ">=1.21.4", markers = "python_version >= \"3.10\" and platform_system == \"Darwin\" and python_version < \"3.11\""}, {version = ">=1.21.2", markers = "platform_system != \"Darwin\" and python_version >= \"3.10\" and python_version < \"3.11\""}, @@ -3092,8 +3092,8 @@ files = [ [package.dependencies] numpy = [ - {version = ">=1.19.3", markers = "platform_system == \"Linux\" and platform_machine == \"aarch64\" and python_version >= \"3.8\" and python_version < \"3.10\" or python_version > \"3.9\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_system != \"Darwin\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_machine != \"arm64\" and python_version < \"3.10\""}, {version = ">=1.21.0", markers = "python_version == \"3.9\" and platform_system == \"Darwin\" and platform_machine == \"arm64\""}, + {version = ">=1.19.3", markers = "platform_system == \"Linux\" and platform_machine == \"aarch64\" and python_version >= \"3.8\" and python_version < \"3.10\" or python_version > \"3.9\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_system != \"Darwin\" and python_version < \"3.10\" or python_version >= \"3.9\" and platform_machine != \"arm64\" and python_version < \"3.10\""}, {version = ">=1.23.5", markers = "python_version >= \"3.11\""}, {version = ">=1.21.4", markers = "python_version >= \"3.10\" and platform_system == \"Darwin\" and python_version < \"3.11\""}, {version = ">=1.21.2", markers = "platform_system != \"Darwin\" and python_version >= \"3.10\" and python_version < \"3.11\""}, @@ -5943,4 +5943,4 @@ visu = ["altair", "streamlit"] [metadata] lock-version = "2.0" python-versions = ">=3.9,<3.9.7 || >3.9.7,<3.12" -content-hash = "64eaee9af19f3c57b60f7c470383742b9a06331dfe0238d5f5e835ae9ec7e970" +content-hash = "5e8491070cd0735a0a987706ce014866a35f41cda18453330f1e924a83fdd6b1" diff --git a/pyproject.toml b/pyproject.toml index dff7e77d..2380e3b3 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -68,7 +68,7 @@ protobuf = "^3.0.0" altair = {version = "^4.2.2", optional = true} -tensorflow-macos = {version = "~2.15.0", optional = true} +tensorflow-macos = {version = ">=2.13,<=2.15", optional = true} streamlit = {version = "^1.28.0", optional = true} tensorflow = {version = ">=2.13,<=2.15", optional = true} tensorflow-metal = {version = "^1.0.0", optional = true} From 249600e398241f2adb012c9e29b68f87ef1e3ff5 Mon Sep 17 00:00:00 2001 From: Timo Schadt Date: Fri, 12 Jan 2024 14:08:48 +0100 Subject: [PATCH 8/8] Remove Testing with Python 3.8 --- .github/workflows/pytest.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/pytest.yaml b/.github/workflows/pytest.yaml index 6ef96945..e61fa466 100644 --- a/.github/workflows/pytest.yaml +++ b/.github/workflows/pytest.yaml @@ -10,7 +10,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: [ "3.8","3.9","3.10","3.11"] + python-version: [ "3.9","3.10","3.11"] os: [ ubuntu-latest, macos-latest] runs-on: ${{ matrix.os }} timeout-minutes: 30