low pass and high pass filtering & ICA-AROMA

[lucyjg]

Hello, thanks for developing fmridenoise!

I am using this command line:
python -m fmridenoise -p ‘/data/group/edu/ANTS/wk_directories/fmridenoise/pipelines/pipeline-ICA-AROMA_8Phys_4GS.json’ -g ‘/data/group/edu/ANTS/wk_directories/wk_rest_bids/’

Do I now need to add the --use-aroma flag for this? Also, is it possible to change the low and high pass filtering defaults? I want to use a band-pass-filtering frequency range of 0.01-0.08 Hz.

Thanks for any help you can give!

[kfinc]

Hi @lucyjg! Thanks for questions!

For now, you need --use-aroma flag when you want to apply pipeline using ICA-AROMA files.

You can also easily change default filtering using --high-pass 0.01 and --low-pass 0.08.