Possibility of running the incompleted program

[milad7093]

Dear Sebastian

I ran my program for ten subjects on my computer ( linux ubuntu 20.04 with 24 cores and 32 GB physical memory (RAM)) . After completing the anatomical pipline, The program performed all diffusion steps except for "connectome_stage.compute_matrice" ( see the attached file). Is there any way to re-run the program's code for computing connectome metrics at this step without the need to run it from the first?

With kind regards

Milad

sub-3105_ses-1_log.txt

[sebastientourbier]

Dear Milad,

If you did not delete the derivatives/nipype-1.8.0, which stores all intermediate nipype outputs, the pipeline should be able to collect the precomputed outputs of all finished and unchanged interface nodes and resume to compute_matrice.

[milad7093]

Dear Sebastian

Many thanks to your help. The program ran completely.

[sebastientourbier]

Great! You're welcome :)