excl-no-deps.txt

AbsFilterGSEA
ACNE
ActiveDriverWGS
adaptiveGPCA
ADAPTS
aLFQ
apmsWAPP
armada
aroma.affymetrix
aroma.cn
aroma.core
ArrayBin
AssayCorrector
AutoPipe
babel
BACA
BALCONY
BALLI
bapred
BASiNET
BayesNetBP
BcDiag
beadarrayFilter
beadarrayMSV
beadplexr
BiDAG
BinQuasi
biofiles
bioimagetools
biomartr
BioMedR
bioOED
bioRad
biospear
BiSEp
BisqueRNA
bnpa
bnspatial
BonEV
bootsPLS
BPM
Brundle
calmate
cancerGI
caRpools
Cascade
cate
ceg
CePa
cghRA
ClassComparison
ClassDiscovery
classGraph
CleanBSequences
clustDRM
CNVScope
CodeDepends
cogmapr
coloc
compendiumdb
CONDOP
CoreGx
CORM
countToFPKM
countTransformers
cp4p
crmn
CrossValidate
CrypticIBDcheck
CSclone
CSESA
CSFA
CVR
cyanoFilter
DAAGbio
dartR
dc3net
DCA
DCchoice
DCD
DCGL
dcGOR
deconstructSigs
demi
DEVis
dGAselID
DGCA
DiffCorr
diffMeanVar
dlsem
dnet
DNLC
DrInsight
DRomics
dSVA
ebvcube
eclust
edgeRun
EMA
empiricalFDR.DESeq2
EncDNA
enviGCMS
ePCR
EstMix
EthSEQ
eulerian
ExomeDepth
exp2flux
FAMT
FARDEEP
fdrDiscreteNull
FHtest
flowDiv
FMradio
funbarRF
FunctionalNetworks
g2f
GenAlgo
genBaRcode
genBart
geneNetBP
geno2proteo
GenomicTools
GenomicTools.fileHandler
GExMap
GiNA
gitter
gkmSVM
GLSE
GMMAT
GOGANPA
gRain
gRbase
gRc
GREP2
gridDebug
gridGraphviz
gRim
groupedSurv
GSAgm
GUIProfiler
harrietr
hasseDiagram
hddplot
HDMT
HEMDAG
HeritSeq
HiCblock
HiCfeat
HiCglmi
HiResTEC
histry
hoardeR
hpoPlot
HTSCluster
HTSSIP
iC10
ICAMS
iCARH
ICDS
icensBKL
iheatmapr
IMaGES
IntClust
IntegratedJM
InterpretMSSpectrum
interval
ionflows
iRefR
IsoGene
isva
jaccard
jackalope
jackstraw
jetset
jointseg
kangar00
KANT
kmeRs
kpcalg
ktspair
LANDD
LDheatmap
leapp
liayson
lmQCM
LOST
LPGraph
maGUI
makeParallel
mcmcabn
mDAG
MEET
Mega2R
Mercator
metaboGSE
MetabolomicsBasics
metacoder
metagear
MetaIntegrator
MetaLonDA
metaMA
MetamapsDB
MetaPath
mExplorer
mGSZ
MiDA
miRtest
missCompare
mixKernel
MKmisc
MM2S
MM2Sdata
MMDvariance
Modeler
moduleColor
MoonFinder
MRPC
MSIseq
msSurv
multiDimBio
mutoss
mutossGUI
mvgraphnorm
myTAI
NanoStringNorm
NAPPA
NBLDA
NBPSeq
neatmaps
netgsa
netgwas
NetPreProc
NFP
NIPTeR
nlcv
noise
NormalizeMets
NPMOD
nucim
omu
ontologyPlot
orQA
PACVr
PairViz
PANDA
ParDNAcopy
pathfindR
Patterns
PCA4you
pcalg
PCDimension
pcgen
PCGSE
PCS
PepPrep
PerfMeas
permGPU
PerseusR
petro.One
phantom
PhenotypeSimulator
PhViD
phyloseqGraphTest
PlasmaMutationDetector
plfMA
PLNmodels
plsRcox
PMA
polyRAD
poolVIM
pRF
propOverlap
protiq
PSCBS
psSubpathway
ptmixed
pulseTD
qtlnet
QuACN
QuasiSeq
R.SamBada
R2GUESS
RadioGx
rags2ridges
ragt2ridges
RANKS
RAPIDR
RcmdrPlugin.BiclustGUI
REIDS
restfulr
rJPSGCS
Rnmr1D
RobLox
RobLoxBioC
robustSingleCell
RockFab
roprov
RPPanalyzer
RSeed
RSNPset
rsolr
RVAideMemoire
saasCNV
SafeQuant
samr
santaR
scBio
scmamp
scRNAtools
SegCorr
SelectBoost
SeqFeatR
seqgendiff
SeqGrapheR
sequenza
sgPLS
ShinyImage
SID
sigminer
SIGN
SigTree
simMP
simPATHy
SimRAD
SimReg
Sky
smapr
smartdata
SmartSVA
SmCCNet
SMITIDstruct
snpEnrichment
snplist
snpReady
snpStatsWriter
SourceSet
speaq
spectralAnalysis
spp
SPreFuGED
SQDA
ssizeRNA
stablespec
statVisual
STRAH
STraTUS
STRMPS
StroupGLMM
structSSI
strum
SubpathwayLNCE
SubVis
superbiclust
survivALL
survJamda
swamp
synbreed
TailRank
TCGA2STAT
TcGSA
theseus
Thresher
tidygenomics
Tnseq
topologyGSA
trackr
treeDA
TriadSim
TROM
ttScreening
uCAREChemSuiteCLI
unifDAG
VSE
WGCNA
wilson
wiseR
XGR
xseq
YuGene
zenplots