New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

alternative storage on s3/glacier #92

Open

sergpolly opened this issue May 5, 2023 · 0 comments

Member

sergpolly commented May 5, 2023

@Snehal1894 here is the "if" for the alternative storage on S3:

if path starts with "/pi/job.dekker-umw/cshare/data/" :
	replace it with "s3://dekkerlab-backups/nl/cshare/data/"
elif path starts with "/pi/job.dekker-umw/archive/cshare/" :
	replace it with "s3://dekkerlab-backups/cshare/"
elif path starts with "/pi/job.dekker-umw/archive/tmp_cshare/" :
	replace it with "s3://dekkerlab-backups/tmp_cshare/"
else:
	this should not happen - good time to check !?

so that's how it matches:

s3://dekkerlab-backups/nl/cshare/data/2020/fastq/03MAR20_C-Monster-A/*	/pi/job.dekker-umw/cshare/data/2020/fastq/03MAR20_C-Monster-A
s3://dekkerlab-backups/cshare/solexa/*		/pi/job.dekker-umw/archive/cshare/solexa/*
s3://dekkerlab-backups/tmp_cshare/solexa/*		/pi/job.dekker-umw/archive/tmp_cshare/solexa/*

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment