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setup.cfg
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[metadata]
classifiers =
Development Status :: 3 - Alpha
Intended Audience :: Science/Research
Topic :: Scientific/Engineering :: Image Recognition
License :: OSI Approved :: Apache Software License
Programming Language :: Python :: 3.6
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.8
description = Automated Quality Control and visual reports for Quality Assesment of structural (T1w, T2w) and functional MRI of the brain.
license = 3-clause BSD
long_description = file:long_description.rst
long_description_content_type = text/x-rst; charset=UTF-8
maintainer = The NiPreps developers
maintainer_email = [email protected]
project_urls =
Documentation = https://mriqc.readthedocs.io/
Manuscript = https://doi.org/10.1371/journal.pone.0184661
Sci Dat Paper = https://doi.org/10.1038/s41597-019-0035-4
Web API = https://mriqc.nimh.nih.gov/
url = https://github.com/poldracklab/mriqc
[options]
python_requires = >= 3.6
install_requires =
dipy
jinja2
matplotlib
nibabel >= 3.0.1,<4.0
nilearn >= 0.2.6, != 0.5.0, != 0.5.1
nipype ~= 1.4
nitime
niworkflows ~= 1.1
numpy
pandas >= 0.21.0
pybids >= 0.10.2
PyYAML
scikit-learn>=0.19.0
scipy
seaborn
statsmodels
svgutils
templateflow >= 0.5.2
toml
xvfbwrapper
test_requires =
coverage
mock
pytest
pytest-cov == 2.5.1
pytest-xdist
packages = find:
include_package_data = True
[options.package_data]
mriqc =
data/*.yml
data/*.tfm
data/csv/*.csv
data/mclf_*.pklz
data/reports/*.rst
data/reports/*.html
data/reports/resources/*
data/reports/embed_resources/*
data/tests/*
data/mni/*.nii.gz
[options.packages.find]
exclude =
*.tests
[options.extras_require]
classifier =
xgboost
classifiers =
%(classifier)s
doc =
packaging
pydot >=1.2.3
pydotplus
sphinx >=2.1.2,<3.0
sphinx-argparse
sphinx_rtd_theme >=0.2.4
docs =
%(doc)s
notebook =
ipython
jupyter
nipy
notebooks =
%(notebook)s
other =
scikit-image
others =
%(other)s
test =
coverage
mock
pytest
pytest-cov == 2.5.1
pytest-xdist
tests =
%(test)s
all =
%(classifier)s
%(doc)s
%(notebook)s
%(test)s
[options.entry_points]
console_scripts =
mriqc=mriqc.cli.run:main
mriqc_clf=mriqc.bin.mriqc_clf:main
mriqc_plot=mriqc.bin.mriqc_plot:main
abide2bids=mriqc.bin.abide2bids:main
fs2gif=mriqc.bin.fs2gif:main
dfcheck=mriqc.bin.dfcheck:main
nib-hash=mriqc.bin.nib_hash:main
participants=mriqc.bin.subject_wrangler:main
mriqc_labeler=mriqc.bin.labeler:main
mriqcwebapi_test=mriqc.bin.mriqcwebapi_test:main
[versioneer]
VCS = git
style = pep440
versionfile_source = mriqc/_version.py
versionfile_build = mriqc/_version.py
tag_prefix =
parentdir_prefix =
[flake8]
max-line-length = 99
doctests = True
ignore =
E266
W503
exclude=*build/