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Add new media to the media database #123

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cb-Hades opened this issue Jun 3, 2024 · 1 comment
Open
7 tasks

Add new media to the media database #123

cb-Hades opened this issue Jun 3, 2024 · 1 comment
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database Issue concerning the database enhancement New feature or request

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@cb-Hades
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cb-Hades commented Jun 3, 2024

Media to add to the database:

Newly added:

Media to rework
Some media do not have media-specific default fluxes. To obtain these ratios of the compounds described in the reference articles or by the supplier can be calculated and added as default fluxes to the database.
($\textcolor{green}{\text{Always store ratios instead of default fluxes in the database?}}$)

  • RPMI

Further notes:
Please feel free to comment further ideas below.

  • Synthetic minimal medium (SMM) is highly dependant on the organism and will (currently) not be added to the database. A organismen-specific SMM can be build step by step by using M9 minimal medium as the starting point.
@cb-Hades cb-Hades added the enhancement New feature or request label Jun 3, 2024
@cb-Hades cb-Hades added the database Issue concerning the database label Aug 8, 2024
@NantiaL
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NantiaL commented Nov 2, 2024

Further growth media relevant to bacteria to add:

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Labels
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