diff --git a/NAMESPACE b/NAMESPACE index a94bb08..97300c3 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -120,7 +120,6 @@ importFrom(EnvStats,stat_n_text) importFrom(NatParksPalettes,scale_color_natparks_d) importFrom(betapart,beta.pair) importFrom(broom,tidy) -importFrom(broom.mixed,tidy) importFrom(cli,cli_abort) importFrom(cli,cli_alert) importFrom(cli,cli_alert_danger) @@ -155,6 +154,7 @@ importFrom(lme4,lmer) importFrom(magrittr,"%>%") importFrom(metafor,rma.mv) importFrom(metaviz,viz_funnel) +importFrom(orchaRd,i2_ml) importFrom(parameters,parameters) importFrom(parsnip,fit) importFrom(parsnip,linear_reg) @@ -236,6 +236,7 @@ importFrom(stringr,str_remove) importFrom(stringr,str_split) importFrom(stringr,str_starts) importFrom(tibble,as_tibble) +importFrom(tibble,as_tibble_row) importFrom(tibble,column_to_rownames) importFrom(tibble,enframe) importFrom(tibble,rownames_to_column) diff --git a/man/generate_rating_subsets.Rd b/man/generate_rating_subsets.Rd index 2d44e5f..72ca933 100644 --- a/man/generate_rating_subsets.Rd +++ b/man/generate_rating_subsets.Rd @@ -39,7 +39,6 @@ Other Multi-dataset Wrapper Functions: \code{\link{summarise_variable_counts}()} Other targets-pipeline functions: -\code{\link{make_viz}()}, \code{\link{prepare_ManyEcoEvo}()}, \code{\link{prepare_ManyEcoEvo_yi}()}, \code{\link{prepare_response_variables_yi}()}, diff --git a/man/make_viz.Rd b/man/make_viz.Rd index d9370fa..d8a7754 100644 --- a/man/make_viz.Rd +++ b/man/make_viz.Rd @@ -16,13 +16,6 @@ a nested dataframe grouped by variables \code{exclusion_set}, \code{dataset}, \c Computes model summaries, tidy model summaries, model fit stats, funnel plots and forest plots for a dataframe of multiple fitted models } \seealso{ -Other targets-pipeline functions: -\code{\link{generate_rating_subsets}()}, -\code{\link{prepare_ManyEcoEvo}()}, -\code{\link{prepare_ManyEcoEvo_yi}()}, -\code{\link{prepare_response_variables_yi}()}, -\code{\link{prepare_review_data}()} - Other Multi-dataset Wrapper Functions: \code{\link{apply_VZ_exclusions}()}, \code{\link{compute_MA_inputs}()}, @@ -43,4 +36,3 @@ Other Multi-dataset Wrapper Functions: \code{\link{summarise_variable_counts}()} } \concept{Multi-dataset Wrapper Functions} -\concept{targets-pipeline functions} diff --git a/man/prepare_ManyEcoEvo.Rd b/man/prepare_ManyEcoEvo.Rd index 644e58a..af5bddc 100644 --- a/man/prepare_ManyEcoEvo.Rd +++ b/man/prepare_ManyEcoEvo.Rd @@ -41,7 +41,6 @@ Other Multi-dataset Wrapper Functions: Other targets-pipeline functions: \code{\link{generate_rating_subsets}()}, -\code{\link{make_viz}()}, \code{\link{prepare_ManyEcoEvo_yi}()}, \code{\link{prepare_response_variables_yi}()}, \code{\link{prepare_review_data}()} diff --git a/man/prepare_ManyEcoEvo_yi.Rd b/man/prepare_ManyEcoEvo_yi.Rd index 2de1eb4..c70e8ff 100644 --- a/man/prepare_ManyEcoEvo_yi.Rd +++ b/man/prepare_ManyEcoEvo_yi.Rd @@ -30,7 +30,6 @@ Prepare ManyEcoEvo raw dataset for out-of-sample predictions \seealso{ Other targets-pipeline functions: \code{\link{generate_rating_subsets}()}, -\code{\link{make_viz}()}, \code{\link{prepare_ManyEcoEvo}()}, \code{\link{prepare_response_variables_yi}()}, \code{\link{prepare_review_data}()} diff --git a/man/prepare_response_variables_yi.Rd b/man/prepare_response_variables_yi.Rd index 5205dd2..bf2d385 100644 --- a/man/prepare_response_variables_yi.Rd +++ b/man/prepare_response_variables_yi.Rd @@ -32,7 +32,6 @@ Operates on nested list-columns of data. The function back-transforms the respon Other targets-pipeline functions: \code{\link{generate_rating_subsets}()}, -\code{\link{make_viz}()}, \code{\link{prepare_ManyEcoEvo}()}, \code{\link{prepare_ManyEcoEvo_yi}()}, \code{\link{prepare_review_data}()} diff --git a/man/prepare_review_data.Rd b/man/prepare_review_data.Rd index 7c13383..44edbf8 100644 --- a/man/prepare_review_data.Rd +++ b/man/prepare_review_data.Rd @@ -20,7 +20,6 @@ Prepare peer-review data from Qualtrics \seealso{ Other targets-pipeline functions: \code{\link{generate_rating_subsets}()}, -\code{\link{make_viz}()}, \code{\link{prepare_ManyEcoEvo}()}, \code{\link{prepare_ManyEcoEvo_yi}()}, \code{\link{prepare_response_variables_yi}()}