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Targets pipeline creates data subsets with outliers removed on partial exclusion set, but we want it on complete.
library(ManyEcoEvo) #> Loading required package: rmarkdown #> Loading required package: bookdown #> Registered S3 method overwritten by 'parsnip': #> method from #> print.nullmodel vegan #> Registered S3 method overwritten by 'lava': #> method from #> print.estimate EnvStats
ManyEcoEvo_viz %>% dplyr::distinct(exclusion_set) #> # A tibble: 3 × 1 #> exclusion_set #> <chr> #> 1 complete #> 2 partial #> 3 partial-rm_outliers
Created on 2024-09-01 with reprex v2.1.0
The text was updated successfully, but these errors were encountered:
- bug!: #136 fix ignore_vars expression when generating Zr outlier su…
0e4ac8c
…bsets to exclude partial, not complete
Looks like 0e4ac8c did the trick
Local .Rprofile detected at /Users/elliotgould/Documents/GitHub/ManyEcoEvo/.Rprofile
.Rprofile
/Users/elliotgould/Documents/GitHub/ManyEcoEvo/.Rprofile
targets::tar_read(ManyEcoEvo_viz) |> dplyr::distinct(exclusion_set) #> Registered S3 method overwritten by 'parsnip': #> method from #> print.nullmodel vegan #> Registered S3 method overwritten by 'lava': #> method from #> print.estimate EnvStats #> # A tibble: 3 × 1 #> exclusion_set #> <chr> #> 1 complete #> 2 partial #> 3 complete-rm_outliers
Sorry, something went wrong.
- build!: tar_make() for #136
tar_make()
661431e
- #136 #137 rerun tar_make() after tar_destroy()
tar_destroy()
af907e5
exclusion_set == complete
egouldo
Successfully merging a pull request may close this issue.
Targets pipeline creates data subsets with outliers removed on partial exclusion set, but we want it on complete.
Created on 2024-09-01 with reprex v2.1.0
The text was updated successfully, but these errors were encountered: