RHR_mean_process.sh

#!/bin/bash

#SBATCH --job-name=patient_RHR_mean_process
#SBATCH --nodes=1
#SBATCH --ntasks=1
#SBATCH --cpus-per-task=1
#SBATCH --partition=interactive
#SBATCH --account=default
#SBATCH --time=1:00:00
#SBATCH --array=0-992
#SBATCH --output=/labs/mpsnyder/LongCovidEkanath/output/RHR_mean_process/%A_%a.out
#SBATCH --error=/labs/mpsnyder/LongCovidEkanath/output/RHR_mean_process/%A_%a.err

module load miniconda/3
FILES=(/labs/mpsnyder/LongCovidEkanath/COVID_Positives/COVID_Positives_RHR_data/*)
python3 RHR_phase_mean.py ${FILES[$SLURM_ARRAY_TASK_ID]}