New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

(re-)visit and consider using PEP/PEPkit #26

Open

sreichl opened this issue Sep 26, 2024 · 0 comments

Assignees

Labels

Collaborator

sreichl commented Sep 26, 2024

https://pep.databio.org/peppy/

(re-)visit and consider using PEP/PEPkit format for config and annotation by N Sheffield (Snakemake natively supports it)
- https://pep.databio.org/
- does it solve a problem I have? or introduce more problems?
- How stable and common?
- What would work better/smoother if I switch?
- Applicable also for all downstream modules or only classic pipelines?

sreichl self-assigned this

sreichl added the enhancement label

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment