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Obsoletion notice: children and regulation of GO:0003899 DNA-directed 5'-3' RNA polymerase activity #914

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raymond91125 opened this issue Dec 21, 2024 · 0 comments

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@raymond91125
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Dear all,

The proposal has been made to obsolete
GO:0001054 RNA polymerase I activity
GO:0001055 RNA polymerase II activity
GO:0001056 RNA polymerase III activity
GO:0001057 RNA polymerase IV activity
GO:0001058 RNA polymerase V activity
GO:0001064 single subunit type RNA polymerase activity
GO:0001065 mitochondrial single subunit type RNA polymerase activity
GO:0001066 plastid single subunit type RNA polymerase activity
GO:1903934 positive regulation of DNA primase activity
GO:1903932 regulation of DNA primase activity
GO:1903623 negative regulation of RNA polymerase III activity
GO:1903622 regulation of RNA polymerase III activity

  • The reason for obsoletion is that the MFs are equivalent to DNA-directed 5'-3' RNA polymerase activity.
  • The reason for obsoletion is that the regulation terms represent MFs.

There are experimental annotations
ComplexPortal 2
ParkinsonsUK-UCL 1
PomBase 6 DONE
SGD 47
ZFIN 1 DONE
UniProt 3
WB 2 DONE
FlyBase 1 DONE
GeneDB 2

There are InterPro2GO/UniRule/UniProtKW mappings
DONE GO:0001054 interpro2go InterPro:IPR033901 DNA-directed RNA polymerases I and III subunit AC40 > GO:RNA polymerase I activity ; GO:0001054
DONE GO:0001055 interpro2go InterPro:IPR037685 RNA polymerase RBP11 > GO:RNA polymerase II activity ; GO:0001055
DONE GO:0001055 reactome2go Reactome:R-HSA-6814549 > GO:RNA polymerase II activity ; GO:0001055
DONE GO:0001055 reactome2go Reactome:R-HSA-6814559 > GO:RNA polymerase II activity ; GO:0001055
DONE GO:0001056 interpro2go InterPro:IPR033901 DNA-directed RNA polymerases I and III subunit AC40 > GO:RNA polymerase III activity ; GO:0001056
DONE GO:0001056 reactome2go Reactome:R-HSA-1964482 > GO:RNA polymerase III activity ; GO:0001056

Annotations can be viewed here: geneontology/go-annotation#5587.

Any comments can be added to the issue: geneontology/go-ontology#23779.

Thanks,

The GO-Ontology Editors

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