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Write equivalent sequence_align_and_tag.cwl for the bisulfite sequencing pipeline. #967

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Sam16711 opened this issue Nov 12, 2020 · 0 comments
Open

Write equivalent sequence_align_and_tag.cwl for the bisulfite sequencing pipeline. #967

Sam16711 opened this issue Nov 12, 2020 · 0 comments
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@chrisamiller
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@Sam16711
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Issue in reference to #935 . In order to support bam/fastq input for the bisulfite.cwl, an equivalent to sequence_align_and_tag.cwl will have to be written and implemented in the workflow. Currently, workflow requires bam file input.
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