-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathSentinel-Asia-Handbook.tex
936 lines (739 loc) · 28.5 KB
/
Sentinel-Asia-Handbook.tex
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
\documentclass[]{book}
\usepackage{lmodern}
\usepackage{amssymb,amsmath}
\usepackage{ifxetex,ifluatex}
\usepackage{fixltx2e} % provides \textsubscript
\ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex
\usepackage[T1]{fontenc}
\usepackage[utf8]{inputenc}
\else % if luatex or xelatex
\ifxetex
\usepackage{mathspec}
\else
\usepackage{fontspec}
\fi
\defaultfontfeatures{Ligatures=TeX,Scale=MatchLowercase}
\fi
% use upquote if available, for straight quotes in verbatim environments
\IfFileExists{upquote.sty}{\usepackage{upquote}}{}
% use microtype if available
\IfFileExists{microtype.sty}{%
\usepackage{microtype}
\UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts
}{}
\usepackage[margin=1in]{geometry}
\usepackage{hyperref}
\hypersetup{unicode=true,
pdftitle={Sentinel Asia Handbook},
pdfauthor={Firman Hadi, Syams Nashrrullah, Ayeisha Sheldon and Dan Tran},
pdfborder={0 0 0},
breaklinks=true}
\urlstyle{same} % don't use monospace font for urls
\usepackage{natbib}
\bibliographystyle{apalike}
\usepackage{longtable,booktabs}
\usepackage{graphicx,grffile}
\makeatletter
\def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi}
\def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi}
\makeatother
% Scale images if necessary, so that they will not overflow the page
% margins by default, and it is still possible to overwrite the defaults
% using explicit options in \includegraphics[width, height, ...]{}
\setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio}
\IfFileExists{parskip.sty}{%
\usepackage{parskip}
}{% else
\setlength{\parindent}{0pt}
\setlength{\parskip}{6pt plus 2pt minus 1pt}
}
\setlength{\emergencystretch}{3em} % prevent overfull lines
\providecommand{\tightlist}{%
\setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}
\setcounter{secnumdepth}{5}
% Redefines (sub)paragraphs to behave more like sections
\ifx\paragraph\undefined\else
\let\oldparagraph\paragraph
\renewcommand{\paragraph}[1]{\oldparagraph{#1}\mbox{}}
\fi
\ifx\subparagraph\undefined\else
\let\oldsubparagraph\subparagraph
\renewcommand{\subparagraph}[1]{\oldsubparagraph{#1}\mbox{}}
\fi
%%% Use protect on footnotes to avoid problems with footnotes in titles
\let\rmarkdownfootnote\footnote%
\def\footnote{\protect\rmarkdownfootnote}
%%% Change title format to be more compact
\usepackage{titling}
% Create subtitle command for use in maketitle
\newcommand{\subtitle}[1]{
\posttitle{
\begin{center}\large#1\end{center}
}
}
\setlength{\droptitle}{-2em}
\title{Sentinel Asia Handbook}
\pretitle{\vspace{\droptitle}\centering\huge}
\posttitle{\par}
\author{Firman Hadi, Syams Nashrrullah, Ayeisha Sheldon and Dan Tran}
\preauthor{\centering\large\emph}
\postauthor{\par}
\predate{\centering\large\emph}
\postdate{\par}
\date{2018-09-05}
\usepackage{booktabs}
\usepackage{amsthm}
\newtheorem{theorem}{Theorem}[chapter]
\newtheorem{lemma}{Lemma}[chapter]
\theoremstyle{definition}
\newtheorem{definition}{Definition}[chapter]
\newtheorem{corollary}{Corollary}[chapter]
\newtheorem{proposition}{Proposition}[chapter]
\theoremstyle{definition}
\newtheorem{example}{Example}[chapter]
\theoremstyle{definition}
\newtheorem{exercise}{Exercise}[chapter]
\theoremstyle{remark}
\newtheorem*{remark}{Remark}
\newtheorem*{solution}{Solution}
\begin{document}
\maketitle
{
\setcounter{tocdepth}{1}
\tableofcontents
}
\chapter*{Preface}\label{preface}
\addcontentsline{toc}{chapter}{Preface}
Due to the nature of the Sentinel Asia (SA) works which are related to
disaster response, Value Added Products (VAPs) are expected to be
produced as soon as the data are available. The book serves as a
guidance for streamlining the process and techniques for data processing
related to SA Activities. Hence, it is expected that the book will help
in reaching the objective.
\chapter{Preparation}\label{preparation}
To conduct Sentinel Asia activities, there are several things that need
to be prepared, (1) Hardware, (2) softwares and (3) Standard Operational
Procedures.
\section{Hardwares}\label{hardwares}
There are three main computers used for Sentinel Asia works, (1) CentOS
Linux , (2) Windows PC and (3) MacPro. CentOS Linux is used as Image
Management System, activating scripts for PDAN website and serve as data
storage downloaded from Sentinel Asia website. Since we will not
continue to use PDAN website, CentOS Linux can be develop as the server
for crowdsourcing or field validation by implementing DRMSurvey or
Ushahidi for example. Windows PC is used to handle processing data
related to flood, while MacPro is used to process data related to
geological hazard such as volcano and earthquake.
\section{Softwares}\label{softwares}
The main softwares for processing data can be divided to proprietary and
open source sofwares. ArcGIS and ENVI are main proprietary sofwares
used, while for open source softwares, QGIS, SNAP and GMT5SAR are
utilized.
\section{Standard Operational
Procedures}\label{standard-operational-procedures}
Standard Operational Procedures (SOP) is the main procedure develop for
each type of disasters. The main objective of writing this SOP is to
standardize the process, so anyone can do the process with the same
output or result.
\chapter{Introduction}\label{intro}
Sentinel Asia is a voluntary initiative to provide satellite data at a
time of a disaster, and to coordinate support in collaboration with data
provider nodes (DPNs), data analysis nodes (DANs), and disaster
management organizations (DMOs) in the Asia-Pacific region. Data
analyses and value added product (VAP) generation is done through
several agencies including the GIC/AIT, which is the Primary Data
Analysis Node (P-DAN). Moreover, Sentinel Asia also supports activities
on disaster risk reduction (DRR) to its member countries in the region.
In this respect, technical and disaster management organizations are
members of Sentinel Asia and are known as joint project team members
(JPTM).
The time lapse of work-flow from a disaster occurrence to the product
delivery stage is an important factor that has a high impact on DRR
activities. The work-flow is a process chain consisting of various
stages such as an emergency observation request (EOR), Sentinel Asia
activation, satellite observations, image processing and analyses,
value-added product (VAPs) generation, product delivery and sharing. It
is important to reduce the time gaps in this process chain. The GIC/AIT
has provided the service as the P-DAN during the contract period.
The main components of the works are (1) the Project Manager (PM)
activities of the International Disaster Charter (IDC) and (2)
generation, provision and evaluation of Value Added Products (VAPs).
All the service for Sentinel Asia activation is provided by effectively
communicating with the Sentinel Asia Secretariat and collecting related
information in order to identify the severity and to monitor the
progress after an activation. Assistance is provided to the authorized
users (AU) of the Asian Disaster Reduction Center (ADRC) member
countries to receive data and products in a timely manner and to share
VAPs with the ADRC and its member countries. After the VAPs are
generated, close communication is maintained during the contract period
with DAN members of the Sentinel Asia-activated countries.
\section{Project Manager (PM) Activities of International Disaster
Charter
(IDC)}\label{project-manager-pm-activities-of-international-disaster-charter-idc}
When a major disaster occurs, the Asian Disaster Reduction Center (ADRC)
can escalate a Sentinel Asia emergency observation request to the
International Disaster Charter (IDC). A project manager (PM), such as
the GIC/AIT, will be nominated from relevant national agencies or
international organizations. The PM role is to ensure effective
communication between the data providers or partner agencies (PA), value
added companies/resellers and authorized users (AU). The PM will
coordinate the activation, ensuring that the acquisition of satellite
images is under way, managing the generation of products or information,
and making sure that the products are delivered to the users according
to their needs and expectations. The Charter activation is considered
closed 30 days after the initial activation date or when the end users
have enough products for their requirements. The PM will then have to
submit a report to the Charter Executive Secretariat (the member of the
PA that nominated the PM -- in this case the JAXA) - within 45 days of
the initial activation date through email or the COS-2 system. The PM
report will conclude the PM's work for this Charter activation.
\section{Sentinel Asia Activities}\label{sentinel-asia-activities}
As the primary data analysis node (P-DAN) of Sentinel Asia, the GIC/AIT
has been effectively communicating with the Sentinel Asia
Secretariat/ADRC and coordinating the response of DAN members for each
emergency observation request. The GIC/AIT analyzed satellite data which
provided by the data provider nodes (DPNs), and then created VAPs and
shared such satellite-based disaster information products to end users
in timely manner.
\chapter{Sentinel Asia Activation Response
Workflow}\label{sentinel-asia-activation-response-workflow}
Here is a the general procedure that should be followed during the
Sentinel Asia Activation.
\section{Immediate Response}\label{immediate-response}
\subsection{Work management}\label{work-management}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Create an activation folder in Kepler
\item
Track the observation plan of satellite data
\end{enumerate}
\subsection{Initial communication with requestor/end
user}\label{initial-communication-with-requestorend-user}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Confirm the affected areas
\item
Update the most recent ground situation
\item
Identify the user needs of VAPs
\item
Request the user to share ground information
\end{enumerate}
\subsection{Download/preparing vector
data}\label{downloadpreparing-vector-data}
The data for many of Asian countries have been prepared in ArcGIS
Geodatabase. Please see Appendices to see how to connect to the
Geodatabase.
\subsection{Download other relevant
data}\label{download-other-relevant-data}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Download SRTM
\item
Download WorldPop
\end{enumerate}
\subsection{Initial data processing}\label{initial-data-processing}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Create project in ArcGIS Pro
\item
Connect to the Country DataBase
\item
Identify the affected admin area
\item
Calculate slope from DEM
\end{enumerate}
\subsection{ArcGIS Online}\label{arcgis-online}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Create a project for the activation
\item
Create a rainfall monitoring tab
\item
Create a tab for social media integration
\end{enumerate}
\subsection{PDAN System}\label{pdan-system}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Activate email notification
\item
Update PDAN website (front page)
\item
Create PDAN forum
\item
Integrate ArcGIS Online
\end{enumerate}
\subsection{Prepare activation report (using
template)}\label{prepare-activation-report-using-template}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Write `Overview'
\item
Write `Description of Disaster Situation'
\item
Write `Disaster Affected Areas'
\item
Write `Data Availability'
\item
Write `Communication'
\end{enumerate}
\section{Data provision and VAP
generation}\label{data-provision-and-vap-generation}
\subsection{Work management}\label{work-management-1}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Call for a meeting, if necessary
\item
Assign staffs available for data processing
\end{enumerate}
\subsection{Communication with
requestor/end-user}\label{communication-with-requestorend-user}
\subsubsection{Check and re-check}\label{check-and-re-check}
Check the draft of VAP by overlaying it with OpenStreetMap data or other
GIS services (Google etc.)
\chapter{PC/Servers Management}\label{pcservers-management}
For Sentinel Asia and IDC Activation, we use several PC and servers for
processing, storing data and results.
\section{ArcGIS Enterprise Geodatabase
Connection}\label{arcgis-enterprise-geodatabase-connection}
\subsection{Downloading SQL Server and setting it
up}\label{downloading-sql-server-and-setting-it-up}
Note: This needs to be completed only once before you can connect to the
server.
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Download and install SQL sever
\item
This is found in KEPLA:
\textbackslash{}203.159.29.17\Kepler\C-Resources\E-Software\_and\_Tools\arcgis\_server
\end{enumerate}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis1} \end{center}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis2} \end{center}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{2}
\tightlist
\item
Go through general installation prompts to install.
\end{enumerate}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis3} \end{center}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{3}
\tightlist
\item
Click next and agree to go through the installation steps.
\item
Features selection -select the boxes shown below
\end{enumerate}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis4} \end{center}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{5}
\tightlist
\item
Complete the rest of the steps and instal the server.
\end{enumerate}
\subsection{Connecting to
Geodatabases}\label{connecting-to-geodatabases}
Connecting to the server and the databases is important as it allows the
user to find and locate common data.
You can connect through either ArcCatalog or ArcGIS Pro Contents.
Connecting through ArcCatalog:
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\item
Open ArcCatalog
\item
Add Database connection as follows:
\end{enumerate}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis5} \end{center}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{2}
\tightlist
\item
Connect to the Database using the following fields:
\end{enumerate}
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig43_arcgis6}
}
\caption{Username: gic, password: GICuser123}\label{fig:fig411f}
\end{figure}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{3}
\tightlist
\item
On the Database drop down list, here is where you select which
database to connect to. Perform this step multiple times to connect to
all relevant databases you want to access - once connected you won't
need to connect again.
\end{enumerate}
Databases:
\begin{itemize}
\item
CDB - This is the common database with all common country data
(vector)
\item
CDB\_R - This it the common database with all raster data
\item
ArcGIS online - This is for ArcGIS Online files
\item
SA - Sentinel Asia
\item
SA\_R - Sentinel Asia Raster
\end{itemize}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis7} \end{center}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{4}
\item
Once the chosen Database is connected it will show on the side bar, y
ou can rename this to the database name - double click this to open
and view the data. All data in the database will show up here, with
the database name followed by the file name.
\item
For the common database, all countries are clustered into raster
datasets, click these to open.
\end{enumerate}
\begin{center}\includegraphics[width=0.4\linewidth]{img/fig43_arcgis8a} \end{center}
\begin{center}\includegraphics[width=0.4\linewidth]{img/fig43_arcgis8b} \end{center}
Note: Click description to find the corresponding names for country
codes
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis9} \end{center}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{6}
\tightlist
\item
If you want to use this data in your map file, just drag the data into
ArcMap from ArcCatalog, it will open like any file
\end{enumerate}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis10} \end{center}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\setcounter{enumi}{7}
\tightlist
\item
You can also access the database from ArcCatalog in the side bar of
ArcMap:
\end{enumerate}
\begin{center}\includegraphics[width=0.7\linewidth]{img/fig43_arcgis11} \end{center}
Following link in Youtube will provide you on the how to do the
procedure \url{https://youtu.be/3DWrBp_5MJc}
\section{SQL Server}\label{sql-server}
GIC Enterprise Databases are stored in SQL Server. The databases are
regularly backup to Kepler and Google Drive (geoinfo )
\subsection{Maintenance}\label{maintenance}
\subsubsection{SQL Backup and
Monitoring}\label{sql-backup-and-monitoring}
\url{https://youtu.be/OBk0SdeB3IM}
\subsubsection{SQL Database Recovery}\label{sql-database-recovery}
We have to make one session to practice on how to recover database, in
case of hard drive failure.
\section{IMS-Server}\label{ims-server}
\subsection{Connection}\label{connection}
\section{Sentinel-PC}\label{sentinel-pc}
\subsection{Connection}\label{connection-1}
\url{https://www.youtube.com/watch?v=Dpx9NslsIqg\&feature=youtu.be}
\section{MacPro}\label{macpro}
\subsection{Connection}\label{connection-2}
\url{https://youtu.be/xje9lyKYTSw}
\section{Cloud Server (Google Compute
Engine)}\label{cloud-server-google-compute-engine}
In case of IDC activation, some of the data will be provided through FTP
sites (port 21). FTP port is restricted at the office network, we have
to download the data by using the server located in GIC Google Compute
Engine. This method will also increase downloading speed from certain
data provider (e.g., CNES).
The method is explained in this video link
\url{https://youtu.be/NS6oLCNrGHg}
\chapter{Standard Operational Procedure
(SOP)}\label{standard-operational-procedure-sop}
This chapter is arranged to different sections according to the most
frequent type of disaster in previous Sentinel Asia Activities. On each
section, the explanation will be based on available data.
\section{Data Download}\label{data-download}
\subsection{Sentinel Asia Website}\label{sentinel-asia-website}
\url{https://youtu.be/yZJi4FRw4Ps}
\subsection{IDC Data Download via FTP}\label{idc-data-download-via-ftp}
Data can be downloaded from Google Cloud Compute Engine via FTP and put
in HTTP folder.
\section{Data processing}\label{data-processing}
\subsection{Flood}\label{flood}
\subsubsection{SAR}\label{sar}
\paragraph{ArcGIS}\label{arcgis}
Before processing the data, it is better to check the processing level
from the filename.
The data (pre and post flood) was processed through 5 main steps: (1)
Data processing including: Radiometric calibration, Speckle filtering,
and Coordinate transformation; (2) Image differencing using image pre
and post-flood; (3) Thresholding of backscatter changes; (4) Image
filtering using majority filter; and (5) Mapping of flooded area. The
methodology is shown in the figure below.
Image for Workflow
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig41_workflow}
}
\caption{Flood Detection General Workflow}\label{fig:fig42a}
\end{figure}
(Step 1: ArcGIS Pro) Radiometric calibration, Speckle filtering, and
Coordinate transformation
Raster Function in ArcGIS Pro is used to process the images (pre and
post-flood), with flowchart as follow:
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig41_workflow1}
}
\caption{ALOS-2 radiometric and geometric calibration Workflow}\label{fig:fig42b}
\end{figure}
\begin{itemize}
\tightlist
\item
To convert raw image to sigma nought with the formula 20 * Log10(DN)
-- 83
\end{itemize}
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig41_workflow2}
}
\caption{ALOS-2 radiometric calibration formula}\label{fig:fig42c}
\end{figure}
\begin{itemize}
\tightlist
\item
To do image filtering with Lee filter (5x5 window size).
\end{itemize}
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig42_workflow3}
}
\caption{ALOS-2 speckle reduction}\label{fig:fig42d}
\end{figure}
\begin{itemize}
\tightlist
\item
To convert coordinate to GCS\_WGS\_1984
\end{itemize}
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig42_workflow4}
}
\caption{Reprojection to GCS WGS84}\label{fig:fig42e}
\end{figure}
(Step 2: ArcGIS Pro) Image differencing Using the Calculator raster
function to create a difference image, with the formula Change =
(Post-flood) - (Pre-flood)
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig42_workflow5}
}
\caption{Image differencing}\label{fig:fig42f}
\end{figure}
(Step 3: ArcGIS Pro) Thresholding of backscatter changes Using the
Calculator raster function to extract flood inundation areas from the
result in step 2 with threshold \textless{} -3.
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig42_workflow6}
}
\caption{Image thresholding}\label{fig:fig42g}
\end{figure}
(Step 4: ArcGIS Pro) Image filtering Majority filter is applied to
reduce noise (salt and pepper) from result in step 3.
(Toolboxes\Spatial Analyst Tools\Generalization\Majority Filter)
\begin{figure}
{\centering \includegraphics[width=0.7\linewidth]{img/fig42_workflow6}
}
\caption{Image filtering}\label{fig:fig42h}
\end{figure}
Then, convert raster to polygon and export to shapefile (.shp) format
for a further step in ArcMap.
\paragraph{QGIS}\label{qgis}
Flood detection can be carried out in QGIS by using Graphical Modeling
as shown in the following video
\url{https://youtu.be/HR_7kENFGT4}
\subsubsection{Optical data}\label{optical-data}
\subsubsection{Google Earth Engine (GEE)}\label{google-earth-engine-gee}
// Load Sentinel-1 images to map the flooding area, // This script was
originally written by Simon Ilyushchenko (GEE team) // Default location
var pt = ee.Geometry.Point(96.4633,17.79); //, , Grand Morin near
Coulommiers
// Load Sentinel-1 C-band SAR Ground Range collection (log scaling, VV
co-polar, Descending) var collection =
ee.ImageCollection(`COPERNICUS/S1\_GRD').filterBounds(pt).
filter(ee.Filter.listContains(`transmitterReceiverPolarisation', `VV')).
filter(ee.Filter.eq(`orbitProperties\_pass', `DESCENDING')).
select(`VV');
// Filter by date, ensure that the result will cover only 1 day
var before = collection.filterDate(`2016-05-5', `2016-05-6').mosaic();
var after = collection.filterDate(`2018-07-24', `2018-07-25').mosaic();
// Threshold smoothed radar intensities to identify ``flooded'' areas.
var SMOOTHING\_RADIUS = 100; var DIFF\_UPPER\_THRESHOLD = -3; var
diff\_smoothed = after.focal\_median(SMOOTHING\_RADIUS, `circle',
`meters') .subtract(before.focal\_median(SMOOTHING\_RADIUS, `circle',
`meters')); var diff\_thresholded =
diff\_smoothed.lt(DIFF\_UPPER\_THRESHOLD);
//Define the extent for exporting the result var geometry =
ee.Geometry.Rectangle({[}105.321, 20.3574, 106.971, 21.313473{]});
// Display map Map.centerObject(pt, 10); Map.addLayer(before,
\{min:-30,max:0\}, `Before flood'); Map.addLayer(after,
\{min:-30,max:0\}, `After flood'); Map.addLayer(after.subtract(before),
\{min:-10,max:10\}, `After - before', 0); Map.addLayer(diff\_smoothed,
\{min:-10,max:10\}, `diff smoothed', 0);
Map.addLayer(diff\_thresholded.updateMask(diff\_thresholded),
\{palette:``0000FF''\},`flooded areas - blue',1);
// Export the image, specifying scale and region.
// Pre-flood Export.image.toDrive(\{ image: before, description:
`MMM\_image\_SentinelBefore', scale: 30, region: geometry \});
// Post-flood
Export.image.toDrive(\{ image: after, description:
`MMM\_image\_SentinelAfter', scale: 30, region: geometry \});
//Flood Export.image.toDrive(\{ image: diff\_thresholded, description:
`MMM\_image\_SentinelFlood', scale: 30, region: geometry \});
\subsubsection{Permanent Water}\label{permanent-water}
\subsection{Earthquake}\label{earthquake}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\item
Connect to MacPro by using VNC Viewer. Username and password to
connect will be provided separately.
\item
Create folder with the structure as below :
\item
IND
\begin{enumerate}
\def\labelenumii{\arabic{enumii}.}
\tightlist
\item
raw folder
\item
topo folder
\item
config.alos2.slc.txt (configuration file for running the process)
\end{enumerate}
\item
Download DEM from GMTSAR website
\item
Go to this link \url{http://topex.ucsd.edu/gmtsar/demgen/}
\item
Enter the coordinate for north, south, east and west. The boundary
cannot span more than 4 longitude by 4 latitude degrees.
\item
Click Generate to process.
\item
If it has finished, click Download to get the result.
\item
\begin{figure}
\centering
\includegraphics{https://d2mxuefqeaa7sj.cloudfront.net/s_16280D51B2B6313EEF06D7EC9BB498F0F653DE3F6FC0EF0F53F10752E0108E06_1534493067726_Screen+Shot+2018-08-17+at+14.26.27.png}
\caption{}
\end{figure}
\item
Copy the ALOS-2 data (IMG, LED and VOL- files) to raw folder
\item
Extract the files downloaded from DEM Generation process in GMTSAR
website and copy all of the files to topo folder.
\item
Modify the config\_alos2\_slc.txt file
\item
If it is the first time in processing, set the value for proc\_stage
to 1 (proc\_stage = 1).
\item
Set dummy value for SLC\_factor, 4.0 (SLC\_factor = 4.0). This is
important as we will receive a warning message to change the value to
the correct one.
\item
Set topo\_phase to 1, to subtract topo\_ra from the phase (topo\_phase
= 1)
\item
Set shift\_topo to 0.
\item
Set switch\_master to 1 if we assume master as repeat and slave as
reference. Set it to 0, if we assume master as reference and slave
image as repeat. The default value is 0 (switch\_master = 0)
\item
For filtering, set filter\_wavelength = 100, and filter1 =
gauss\_alos\_100m.
\item
Set decimation of images to 1 if we want higher resolution image and
set it to 2 if we want smaller resolution (dec\_factor = 1)
\item
Set correlation threshold for snapu to 0.1 (threshold\_snaphu = 0.1)
\item
Leave the option blank to unwrap the whole region (region\_cut = ).
Note that, in the latest version of GMT5SAR, this option will be
executed if we write the config for interpolation (near\_interp = 1).
If we don't put this option for interpolation, the result will be
unwrapped to half of the image.
\item
For masking the Lake or Ocean, set switch\_land to 1 (switch\_land =
1).
\item
Set defomax = 0 for smoother unwrapped phase.
\item
Set threshold\_geocode = .10
\item
Under IND folder, by using Command Line, run this command
``p2p\_ALOS2\_SLC.csh IMG-master IMG-slave config.alos2.slc.txt''.
Change IMG-master with the full file name of IMG as master and
IMG-slave with the full file name of slave IMG.
\item
Wait for the process to finish. It will take some time depend on the
CPU speed and also the type of data. SM1 data will take longer than
SM3.
\item
The results will be created in intf folder, under IND folder.
\item
KML files can be opened using Google Earth. Files without \_ll suffix
are still in azimuth and range coordinates, those with \_ll suffix
mean already in Geographic Coordinate System WGS84.
\item
Files with .grd extension can be opened using QGIS and then exported
to GeoTIFF format.
\item
The results in TIFF extension are used in ArcMap for layouting.
\end{enumerate}
\subsection{Volcano}\label{volcano}
\subsection{Landslide}\label{landslide}
\subsection{Glacier Lake Outburst
Flood}\label{glacier-lake-outburst-flood}
\subsection{Forest Fire}\label{forest-fire}
\section{Data Layout}\label{data-layout}
\subsection{Check and re-check}\label{check-and-re-check-1}
\begin{enumerate}
\def\labelenumi{\arabic{enumi}.}
\tightlist
\item
Check and re-check the draft of VAP before uploading to SA server.
\item
Compare the geometry with other available online data \#\# Data Upload
to Server
\end{enumerate}
\chapter*{Appendices}\label{appendices}
\addcontentsline{toc}{chapter}{Appendices}
\subsection*{ArcGIS Enterprise Geodatabase
connection}\label{arcgis-enterprise-geodatabase-connection-1}
\addcontentsline{toc}{subsection}{ArcGIS Enterprise Geodatabase
connection}
\subsection*{Useful Links}\label{useful-links}
\addcontentsline{toc}{subsection}{Useful Links}
\subsection*{ArcGIS Pro scripts}\label{arcgis-pro-scripts}
\addcontentsline{toc}{subsection}{ArcGIS Pro scripts}
\subsection*{Generalization script}\label{generalization-script}
\addcontentsline{toc}{subsection}{Generalization script}
\bibliography{book.bib,packages.bib}
\end{document}