EVE Project Data

EFV sequences were recovered from whole genome sequence (WGS) assemblies via database-integrated genome screening (DIGS) using the DIGS tool.

Species With EFVs Some of the species in which we identified novel endogenous flaviviral elements (EFVs) Left to right: freshwater jellyfish (Craspedacusta sowerbyi), long-horned beetle (Anoplophora glabripennis), tadpole shrimp (Lepidurus arcticus), tube-eye fish (Stylephorus chordatus).

Raw FASTA for EFVs recovered via DIGS are here.

Sequence-associated data in tabular format are here.

The tabular files contain information about the genomic locations of EFVs. All data pertaining to this screen are included in this repository.

• The complete list of vertebrate genomes screened can be found here.
• The complete list of invertebrate genomes screened can be found here.
• The set of flavivirus polypeptide sequences used as probes can be found here.
• The final set of flavivirus and EFV polypeptide sequences used as references can be found here.
• Input parameters for screening using the DIGS tool can be found here.