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Need entity names for the ids in the DRKG graph #28

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kapeed1011 opened this issue Oct 8, 2021 · 1 comment
Open

Need entity names for the ids in the DRKG graph #28

kapeed1011 opened this issue Oct 8, 2021 · 1 comment

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@kapeed1011
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Hi

The graph available in the DRKG repository containing 5,874,261 triplets has ids for identifying compounds and diseases.
Please find this sample from the main graph dataset.

Sample from graph:
Compound::DB01586 GNBR::T::Compound:Disease Disease::MESH:C535932
Compound::DB01586 GNBR::T::Compound:Disease Disease::MESH:D002779
Compound::DB01586 GNBR::Pa::Compound:Disease Disease::MESH:D007674

Ideal data format needed:
Ursodeoxycholic acid GNBR::T::Compound:Disease Cholestasis of pregnancy
Ursodeoxycholic acid GNBR::T::Compound:Disease Cholestasis
Ursodeoxycholic acid GNBR::Pa::Compound:Disease Kidney Diseases

Is there any automated way through which we can get the names for these ids ?
Any help in this direction will be appreciated.

@ishaan-mehta
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If you are familiar with using APIs, you should be able to do so by using the National Library of Medicine's tool here

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