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[Feature request] Allow stdin for input of fasta sequences #2

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jolespin opened this issue Mar 1, 2022 · 1 comment
Open

[Feature request] Allow stdin for input of fasta sequences #2

jolespin opened this issue Mar 1, 2022 · 1 comment

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@jolespin
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jolespin commented Mar 1, 2022

Currently, I have to merge all of my fasta files into a temporary file to run but it would be extremely helpful if I could just do :

zcat *.fa.gz | tiara -o test.tsv --predictions --threads 16 
@santonow
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I'm planning to rewrite some parts of tiara to work one sequence at the time, so this will be added then, thanks for your suggestion.

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