From 24b1217e673b079ce2b036e85e492a7f4aaa9ebb Mon Sep 17 00:00:00 2001
From: shakson-isaac <76669591+shakson-isaac@users.noreply.github.com>
Date: Thu, 27 Jul 2023 15:51:52 -0400
Subject: [PATCH] Update README.md

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 378c0dc..d010229 100644
--- a/README.md
+++ b/README.md
@@ -76,7 +76,7 @@ Followed by SCENT algorithm:
 ```r
 SCENT_obj <- SCENT_algorithm(object = SCENT_obj, celltype = "Tcell", ncores = 6, regr = 'poisson', bin = TRUE)
 ```
-The user specifies a 'celltype' (in this case “Tcell”) for association analysis (in meta.data slot in SCENT object), 'ncores' for the number of cores for parallelized bootstrapping, 'regr' for the regression type (Poisson ‘poisson’ or Negative Binomial ‘negbin’ regression), and 'bin' for whether to binarize ATAC counts (TRUE for binarization or FALSE for not).
+The user specifies a `celltype` (in this case “Tcell”) for association analysis (in meta.data slot in SCENT object), `ncores` for the number of cores for parallelized bootstrapping, `regr` for the regression type (Poisson ‘poisson’ or Negative Binomial ‘negbin’ regression), and `bin` for whether to binarize ATAC counts (TRUE for binarization or FALSE for not).
 
 The output of the SCENT algorithm will be contained in the field:
 ```r