diff --git a/README.md b/README.md index c06d537..7202b65 100644 --- a/README.md +++ b/README.md @@ -192,8 +192,8 @@ Arguments in the bash file are user specified as follows: |3 | file_SCENT_obj | SCENT object that contains atac_matrix, rna_matrix, metafile, peak_gene_list, etc. To run the SCENT algorithm | |4 | celltype | User specified celltype (ex. "Tcells") to run the SCENT algorithm | |5 | regr | User specified regression type (ex. "poisson") to run SCENT algorithm | -|6 | bin | User specified choice to binarize ATAC counts (ex. TRUE) or not | -|7 | output_dir | User specified directory to output the SCENT results to aggregate once completed. | +|6 | bin | User specified choice to binarize ATAC counts (ex. TRUE) | +|7 | output_dir | User specified directory to output the SCENT results to aggregate once completed | ### Contact