pyproject.toml

[build-system]
requires = ["setuptools>=61.0", "setuptools_scm[toml]>=6.2"]
build-backend = "setuptools.build_meta"

[tool.setuptools_scm]

[project]
name = "pysal"
dynamic = ["version"]
authors = [ # in alphabetical order
    { name = "Serge Rey", email = "sjsrey@gmail.com" },
    { name = "Levi Wolf", email = "levi.john.wolf@gmail.com" },
]
maintainers = [{ name = "PySAL Developers" }]
license = { text = "BSD 3-Clause" }
description = "Meta Package for PySAL - A library of spatial analysis functions"
keywords = ["spatial statistics", "spatial graphs"]
readme = "README.md"
classifiers = [
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: BSD License",
    "Operating System :: OS Independent",
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: GIS",
]
requires-python = ">=3.10"
dependencies = [
    "beautifulsoup4>=4.10",
    "geopandas>=0.10.0",
    "numpy>=1.22",
    "packaging>=22",
    "pandas>=1.4",
    "platformdirs>=2.0.2",
    "requests>=2.27",
    "scipy>=1.8",
    "shapely>=2.0.1",
    "scikit-learn>=1.1",
    "libpysal>=4.12.1",
    "access>=1.1.9",
    "esda>=2.6.0",
    "giddy>=2.3.6",
    "inequality>=1.1.1",
    "pointpats>=2.5.1",
    "segregation>=2.5.1",
    "spaghetti>=1.7.6",
    "mgwr>=2.2.1",
    "momepy>=0.9.1",
    "spglm>=1.1.0",
    "spint>=1.0.7",
    "spreg>=1.8.1",
    "tobler>=0.12.1",
    "mapclassify>=2.8.1",
    "splot>=1.1.7",
    "spopt>=0.6.1",
]

[project.urls]
Home = "https://github.com/pysal/pysal/"
Repository = "https://github.com/pysal/pysal"

[project.optional-dependencies]
plus = [
    "joblib>=1.2",
    "networkx>=2.7",
    "numba>=0.55",
    "pyarrow>=7.0",
    "sqlalchemy>=2.0",
    "xarray>=2022.3",
    "zstd",
]
dev = [
    "pre-commit",
    "ruff",
    "watermark",
]
docs = [
    "mkdocs-jupyter",
    "myst-parser",
    "nbsphinx",
    "numpydoc",
    "pandoc",
    "sphinx",
    'sphinx_design',
    "sphinxcontrib-bibtex",
    "sphinx_pydata_theme",
]
tests = [
    "codecov",
    "geodatasets>=2023.3.0",
    "matplotlib>=3.6",
    "pytest",
    "pytest-mpl",
    "pytest-cov",
    "pytest-xdist",
]

[tool.setuptools.packages.find]
include = ["pysal", "pysal.*"]

[tool.ruff]
line-length = 88
lint.select = ["E", "F", "W", "I", "UP", "N", "B", "A", "C4", "SIM", "ARG"]
target-version = "py310"
exclude = ["pysal/tests/*", "docs/*"]
[tool.ruff.lint.per-file-ignores]
"*__init__.py" = [
    "F401",  # imported but unused
    "F403",  # star import; unable to detect undefined names
]


[tool.coverage.run]
source = ["./pysal"]

[tool.coverage.report]
exclude_lines = [
    "raise NotImplementedError",
    "except ModuleNotFoundError:",
    "except ImportError",
]
ignore_errors = true
omit = ["pysal/tests/*", "docs/conf.py"]

[tool.pytest.ini_options]
filterwarnings = [
    "ignore:The numba package is used",
    "ignore:numba cannot be imported",
    "ignore:Numba not imported",
    "ignore:The weights matrix is not fully connected",
    "ignore:You are trying to build a full W object from",
    "ignore:Multiple layers detected. Using first layer as default",
    "ignore:Geometry is in a geographic CRS",
    "ignore:`use_index` defaults to False",
    "ignore:Objects based on the `Geometry` class will deprecated",
    "ignore:PolygonLocator is deprecated",
    "ignore:SegmentGrid is deprecated",
    "ignore:In the next version of pysal, observations with no neighbors",
    "ignore:divide by zero encountered",
    "ignore:invalid value encountered",
    "ignore:Passing a SingleBlockManager", # https://github.com/geopandas/geopandas/issues/3060
    "ignore:Passing a BlockManager", # https://github.com/geopandas/geopandas/issues/3060
]