diff --git a/src/main/python/clinicalfilter/reporting.py b/src/main/python/clinicalfilter/reporting.py index a1036c7..fdf0c5b 100755 --- a/src/main/python/clinicalfilter/reporting.py +++ b/src/main/python/clinicalfilter/reporting.py @@ -124,7 +124,7 @@ def _get_output_line(self, candidate, dad_aff, mom_aff, alternate_ID): max_maf = "NA" max_maf = str(max_maf) - genes = [x if x is not None else "." for x in var.get_genes()] + genes = [x for x in candidate[3]] output_line = [self.family.child.get_id(), alternate_ID, \ self.family.child.get_gender(), var.get_chrom(), \