options.json

{
	"preproc": {
		"choose_calib": [
			{
				"ftype": "bias",
				"instrument": "ratir",
				"workdir": "/absolute/path/to/fits/bias",
				"cams": [0,1,2,3],
				"auto": false,
				"reject_sat": true,
				"amin": 0.2,
				"amax": 0.8,
				"save_select": true,
				"figsize": [8,5],
				"noplot": false
			},
			{
				"ftype": "dark",
				"instrument": "ratir",
				"workdir": "/absolute/path/to/fits/dark",
				"cams": [0,1,2,3],
				"auto": false,
				"reject_sat": true,
				"amin": 0.2,
				"amax": 0.8,
				"save_select": true,
				"figsize": [8,5],
				"noplot": false
			},
			{
				"ftype": "flat",
				"instrument": "ratir",
				"workdir": "/absolute/path/to/fits/flat",
				"cams": [0,1,2,3],
				"auto": false,
				"reject_sat": true,
				"amin": 0.2,
				"amax": 0.8,
				"save_select": true,
				"figsize": [8,5],
				"noplot": false
			}
		],
		"choose_science": {
			"instrument": "ratir",
			"workdir": "/absolute/path/to/fits/dir",
			"targetdir": "/absolute/path/to/target/dir",
			"cams": [0,1,2,3],
			"auto": false,
			"save_select": true,
			"figsize": [10,10],
			"calibrate": false,
			"noplot": false
		},
		"mkmaster": [
			{
				"instrument": "ratir",
				"fn_dict": "/absolute/path/to/dict/file",
				"mtype": "bias",	
				"fmin": 5
			},
			{
				"instrument": "ratir",
				"fn_dict": "/absolute/path/to/dict/file",
				"mtype": "dark",
				"fmin": 5
			},
			{
				"instrument": "ratir",
				"fn_dict": "/absolute/path/to/dict/file",
				"mtype": "flat",
				"fmin": 5
			}
		]
	},
	"autoproc": {
		"datadir": "/absolute/path/to/raw/fits/dir",
		"imdir": "/aboslute/path/to/reduced/dir",
		"start": "",
		"stop": "",
		"only": "",
		"step": "",
		"nocrclean": false,
		"nomastersky": false,
		"redo": false,		
		"quiet": false,
		"rmifiles": false,
		"customcat": "",
		"customcatfilt": [""]
	}
}