A Jupyter wrapper for the igv.js library
To install use pip:
pip install ipyigv
To install with mamba:
mamba install ipyigv -c conda-forge
To install with conda:
conda install ipyigv -c conda-forge
To enable it in jupyter notebook
jupyter nbextension enable --py --sys-prefix ipyigv
To install for jupyterlab <=2
jupyter labextension install @jupyter-widgets/jupyterlab-manager --no-build
jupyter lab build
mamba install nodejs jupyterlab -c conda-forge
git clone https://github.com//ipyigv.git
cd ipyigv
pip install -e .
jupyter nbextension install --py --symlink --sys-prefix ipyigv
jupyter nbextension enable --py --sys-prefix ipyigv
jupyter labextension install js
When actively developing your extension, build Jupyter Lab with the command:
jupyter lab --watch
This takes a minute or so to get started, but then automatically rebuilds JupyterLab when your javascript changes.
Note on first jupyter lab --watch, you may need to touch a file to get Jupyter Lab to open.