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Add reVUE to the genome nexus annotation pipeline.
Problems: Users may not know the AA change and variant classification has been changed by reVUE, so we need to indicate in maf that particular variants annotation has been overwritten.
We also need to make sure reVUE information is:
easy to read or parse
fit into MAF (e.g. how to add reVUE description column in MAF)
no duplicated columns (ReVUE_Revised_Protein_Change=AA_Change, ReVUE_Revised_Variant_Classification=Variant_Classification, these two columns are already existed)
can tell people the overwritten fields are AA change and variant classification
Option1: Add all information into single cell
Option2: Add to multiple cells
The text was updated successfully, but these errors were encountered:
Add reVUE to the genome nexus annotation pipeline.
Problems: Users may not know the AA change and variant classification has been changed by reVUE, so we need to indicate in maf that particular variants annotation has been overwritten.
We also need to make sure reVUE information is:
Option1: Add all information into single cell
Option2: Add to multiple cells
The text was updated successfully, but these errors were encountered: