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How can I get a good fitting effect model #57

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xingguowu opened this issue Jul 10, 2024 · 2 comments
Open

How can I get a good fitting effect model #57

xingguowu opened this issue Jul 10, 2024 · 2 comments

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@xingguowu
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Hello,

I am running ReLERNN to estimate recombination rate of maize genome(85% TE, 2.2 Gb genome size).

No matter how I adjust windowsize, the model of this group(F2，n=180, depth=5x,Sequencing per plant for calling SNP variants and filtered low_qual......) R2 and MAE values are not ideal.

Can you give me some advice？

Thank you very much
@xingguowu
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@xingguowu
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xingguowu commented Jul 10, 2024 •
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image the default parameters were used

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