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batch_sparse_to_dense_op.cu
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batch_sparse_to_dense_op.cu
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#include "caffe2/operators/batch_sparse_to_dense_op.h"
#include "caffe2/utils/cub_namespace.cuh"
#include <cub/device/device_scan.cuh>
#include "caffe2/core/context_gpu.h"
namespace caffe2 {
namespace {
template <typename TLen>
void array_prefix_sum_inclusive(
const TLen* dev_array,
const int num_items,
Tensor& prefix_buffer,
Tensor& prefix_sum,
CUDAContext& context) {
// Retrieve buffer size
size_t temp_storage_bytes = 0;
prefix_sum.Resize(num_items);
cub::DeviceScan::InclusiveSum(
nullptr,
temp_storage_bytes,
dev_array,
prefix_sum.mutable_data<TLen>(),
num_items,
context.cuda_stream());
// Allocate temporary storage
auto buffer_size = (temp_storage_bytes + sizeof(TLen)) / sizeof(TLen);
prefix_buffer.Resize(buffer_size);
void* dev_temp_storage =
static_cast<void*>(prefix_buffer.mutable_data<TLen>());
// Inclusive sum
cub::DeviceScan::InclusiveSum(
dev_temp_storage,
temp_storage_bytes,
dev_array,
prefix_sum.mutable_data<TLen>(),
num_items,
context.cuda_stream());
}
template <typename TLen, typename TInd>
__global__ void FillInDenseValuesKernel(
const int64_t batch_size,
const int64_t dense_last_dim,
const TInd* indices_data,
const float* values_data,
const TLen* L_cum_sum_data,
float* output_data) {
CUDA_1D_KERNEL_LOOP(idx, batch_size) {
int offset_start = idx == 0 ? 0 : L_cum_sum_data[idx - 1];
int offset_end = L_cum_sum_data[idx];
for (int q = offset_start; q < offset_end; q++) {
int indice = indices_data[q];
float val = values_data[q];
output_data[idx * dense_last_dim + indice] = val;
}
}
}
template <typename TLen, typename TInd>
__global__ void FillInSparseValuesKernel(
const int64_t batch_size,
const int64_t dense_last_dim,
const TInd* indices_data,
const float* dense_data,
const TLen* L_cum_sum_data,
float* output_data) {
CUDA_1D_KERNEL_LOOP(idx, batch_size) {
int offset_start = idx == 0 ? 0 : L_cum_sum_data[idx - 1];
int offset_end = L_cum_sum_data[idx];
for (int q = offset_start; q < offset_end; q++) {
int indice = indices_data[q];
output_data[q] = dense_data[idx * dense_last_dim + indice];
}
}
}
} // namespace
template <>
template <typename TLen, typename TInd>
void BatchSparseToDenseOp<float, CUDAContext>::FillInDenseValues(
const int64_t batch_size,
const int64_t indice_lengths,
const TLen* lengths_data,
const TInd* indices_data,
const float* values_data,
float* output_data,
CUDAContext* context) {
// calculate the prefix sum of the length array
array_prefix_sum_inclusive<TLen>(
lengths_data, batch_size, len_prefix_tmp_, len_prefix_sum_, context_);
// launch the gpu kernel for to fill in dense values
const int64_t min_size = 1;
FillInDenseValuesKernel<TLen, TInd><<<
CAFFE_GET_BLOCKS(std::max(batch_size, min_size)),
CAFFE_CUDA_NUM_THREADS,
0,
context->cuda_stream()>>>(
batch_size,
dense_last_dim_,
indices_data,
values_data,
len_prefix_sum_.data<TLen>(),
output_data);
C10_CUDA_KERNEL_LAUNCH_CHECK();
}
template <>
template <typename TLen, typename TInd>
void BatchDenseToSparseOp<float, CUDAContext>::FillInSparseValues(
const int64_t batch_size,
const int64_t indice_lengths,
const TLen* lengths_data,
const TInd* indices_data,
const float* dense_data,
float* output_data,
CUDAContext* context) {
// calculate the prefix sum of the length array
array_prefix_sum_inclusive<TLen>(
lengths_data, batch_size, len_prefix_tmp_, len_prefix_sum_, context_);
// launch the gpu kernel for to fill in sparse values
const int64_t min_size = 1;
FillInSparseValuesKernel<TLen, TInd><<<
CAFFE_GET_BLOCKS(std::max(batch_size, min_size)),
CAFFE_CUDA_NUM_THREADS,
0,
context->cuda_stream()>>>(
batch_size,
dense_last_dim_,
indices_data,
dense_data,
len_prefix_sum_.data<TLen>(),
output_data);
C10_CUDA_KERNEL_LAUNCH_CHECK();
}
REGISTER_CUDA_OPERATOR(
BatchSparseToDense,
BatchSparseToDenseOp<float, CUDAContext>);
REGISTER_CUDA_OPERATOR(
BatchDenseToSparse,
BatchDenseToSparseOp<float, CUDAContext>);
} // namespace caffe2