diff --git a/docs/src/content/docs/reference/helm-chart-config.mdx b/docs/src/content/docs/reference/helm-chart-config.mdx
index 22bb1c09e..84938e0d6 100644
--- a/docs/src/content/docs/reference/helm-chart-config.mdx
+++ b/docs/src/content/docs/reference/helm-chart-config.mdx
@@ -76,7 +76,12 @@ Definition of metadata fields for sequence entries of an organism, for example t
 <SchemaDocs group='preprocessing' fieldColumnClass='w-28' />
 
 The values for `args` and `configFile` depend on the used preprocessing pipeline.
-For the Nextclade preprocessing pipeline, please see
+
+#### Nextclade Preprocessing Pipeline ConfigFile (type)
+
+<SchemaDocs group='nextcladePipelineConfigFile' fieldColumnClass='w-28' />
+
+For more details on the Nextclade preprocessing pipeline, please see
 [here](../../for-administrators/existing-preprocessing-pipelines/#nextclade-based-pipeline).
 
 ### Ingest (type)
@@ -84,11 +89,12 @@ For the Nextclade preprocessing pipeline, please see
 <SchemaDocs group='ingest' fieldColumnClass='w-28' />
 
 The values for `configFile` depend on the used preprocessing pipeline.
-For [our ingest pipeline](https://github.com/loculus-project/loculus/tree/main/ingest)
-which downloads data from NCBI GenBank using NCBI Datasets, the config file needs to
-contain the taxon_id of the organism and additionally, if the organism is multi-segmented,
-it requires a list of segment names (nucleotide_sequences) and the nextclade_dataset that
-can be used for segment identification and alignment.
+
+#### Ingest ConfigFile (type)
+
+For [our ingest pipeline](https://github.com/loculus-project/loculus/tree/main/ingest) we require the following fields:
+
+<SchemaDocs group='ingestPipelineConfigFile' fieldColumnClass='w-28' />
 
 ### NucleotideSequence (type)
 
diff --git a/kubernetes/loculus/values.schema.json b/kubernetes/loculus/values.schema.json
index 93802fe2a..242433743 100644
--- a/kubernetes/loculus/values.schema.json
+++ b/kubernetes/loculus/values.schema.json
@@ -335,19 +335,19 @@
                 "description": "Fields that should be added to the preprocessing pipeline config file.",
                 "properties": {
                     "alignment_requirement": {
-                      "groups": ["ingest"],
+                      "groups": ["nextcladePipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "string",
                       "enum": ["ALL", "ANY"],
                       "description": "If multi-segmented viruses should require ALL segments align or ANY segment aligns"
                     },
                     "nextclade_dataset_server": {
-                      "groups": ["ingest"],
+                      "groups": ["nextcladePipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "string"
                     },
                     "nextclade_dataset_name": {
-                      "groups": ["ingest"],
+                      "groups": ["nextcladePipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "string",
                       "description": "Required if sequences should be aligned"
@@ -391,31 +391,31 @@
                   "description": "If multi-segmented organism, how to identify segments",
                   "properties": {
                     "method": {
-                      "groups": ["ingest"],
+                      "groups": ["ingestPipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "string",
                       "enum": ["align", "minimizer"],
                       "description": "Method to identify segments, uses either nextclade align or nextclade sort"
                     },
                     "nextclade_dataset_server": {
-                      "groups": ["ingest"],
+                      "groups": ["ingestPipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "string"
                     },
                     "nextclade_dataset_name": {
-                      "groups": ["ingest"],
+                      "groups": ["ingestPipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "string",
                       "description": "Required if method is align"
                     },
                     "minimizer_parser": {
-                      "groups": ["ingest"],
+                      "groups": ["ingestPipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "array",
                       "description": "Required if method is minimizer, list of the name of each '_' - separated metadata field in the minimizer index"
                     },
                     "minimizer_index": {
-                      "groups": ["ingest"],
+                      "groups": ["ingestPipelineConfigFile"],
                       "docsIncludePrefix": false,
                       "type": "string",
                       "description": "Required if method is minimizer"