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indels #30

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XueqiongLi opened this issue Jul 19, 2017 · 0 comments
Open

indels #30

XueqiongLi opened this issue Jul 19, 2017 · 0 comments

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@XueqiongLi
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Hi,
I am looking for insertion and deletion in my dataset with Parsnp and Harvesttools. I have SNP information in VCF output file but no indels information. My command is:
Harvest-Linux64-v1.1.2/parsnp -r -d -p 32 -o -c -x

Harvest-Linux64-v1.1.2/harvesttools -x -f
-n -V

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@XueqiongLi