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Merge branch 'master' into relax-unique-lower-threshold compile and e.coli #389: Commit 94f0da6 pushed by skoren
December 23, 2023 13:28 4m 45s relax-unique-lower-threshold
relax-unique-lower-threshold
December 23, 2023 13:28 4m 45s
fix threading when there's only 1 core compile and e.coli #388: Commit 0b2a16c pushed by skoren
December 22, 2023 22:32 4m 56s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 22:32 4m 56s
fix threading when there's only 1 core compile and e.coli #387: Commit f795a72 pushed by skoren
December 22, 2023 22:28 6m 18s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 22:28 6m 18s
fix threading when there's only 1 core compile and e.coli #386: Commit 4dfe575 pushed by skoren
December 22, 2023 22:17 6m 33s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 22:17 6m 33s
Update README.md compile and e.coli #385: Commit 1335aab pushed by skoren
December 22, 2023 21:45 5m 28s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 21:45 5m 28s
Merge branch 'relax-unique-lower-threshold' of https://github.com/mar… compile and e.coli #384: Commit d546aa2 pushed by arangrhie
December 22, 2023 21:34 6m 34s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 21:34 6m 34s
Remove unused overlapInCore compile and e.coli #383: Commit 3b64503 pushed by skoren
December 22, 2023 20:36 5m 45s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 20:36 5m 45s
use correction in unit-tests compile and e.coli #382: Commit 11e91f6 pushed by skoren
December 22, 2023 20:17 2m 58s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 20:17 2m 58s
use correction in unit-tests since it's faster now compile and e.coli #381: Commit 4c28a85 pushed by skoren
December 22, 2023 20:14 3m 10s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 20:14 3m 10s
dont update to snakemake 8 compile and e.coli #380: Commit a2d3c1c pushed by skoren
December 22, 2023 19:52 2m 56s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 19:52 2m 56s
dont update to snakemake 8 compile and e.coli #379: Commit 8134aa0 pushed by skoren
December 22, 2023 19:49 2m 51s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 19:49 2m 51s
turn of verbose flags in consensus compile and e.coli #378: Commit 2237ad2 pushed by skoren
December 22, 2023 18:39 2m 49s master
master
December 22, 2023 18:39 2m 49s
dump the shell scripts on failure as well compile and e.coli #377: Commit 6dc216c pushed by skoren
December 22, 2023 18:37 2m 52s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 18:37 2m 52s
Update memory used for batched overlapper compile and e.coli #376: Commit e666f74 pushed by skoren
December 22, 2023 16:24 3m 10s relax-unique-lower-threshold
relax-unique-lower-threshold
December 22, 2023 16:24 3m 10s
Add support for batched matchchains aka hifioverlapper. compile and e.coli #375: Commit d88d47a pushed by brianwalenz
December 21, 2023 21:42 12s relax-and-batch
relax-and-batch
December 21, 2023 21:42 12s
Fix variable RUKKI -> RUK, d'oh. compile and e.coli #374: Commit 0e71681 pushed by brianwalenz
December 21, 2023 19:30 17s mbg-hifioverlap-submodule
mbg-hifioverlap-submodule
December 21, 2023 19:30 17s
Add MBG and hifioverlapper as submodules. compile and e.coli #373: Commit 2e7823c pushed by brianwalenz
December 21, 2023 18:41 13s mbg-hifioverlap-submodule
mbg-hifioverlap-submodule
December 21, 2023 18:41 13s
Add MBG and hifioverlapper as submodules. compile and e.coli #372: Commit 016b1df pushed by brianwalenz
December 21, 2023 18:29 5m 54s mbg-hifioverlap-submodule
mbg-hifioverlap-submodule
December 21, 2023 18:29 5m 54s
redirect which output to avoid poluting stderr with messages about mi… compile and e.coli #371: Commit aa46707 pushed by skoren
December 21, 2023 16:07 2m 52s master
master
December 21, 2023 16:07 2m 52s
Add option --correct-batch-size to limit RED batch size to N Mbp. Is… compile and e.coli #370: Commit b7f7bab pushed by brianwalenz
December 20, 2023 21:45 3m 5s master
master
December 20, 2023 21:45 3m 5s
Add controls for hifioverlapper batch size, remove/rename obsolete co… compile and e.coli #369: Commit 4e0747d pushed by brianwalenz
December 20, 2023 20:57 3m 19s relax-and-batch
relax-and-batch
December 20, 2023 20:57 3m 19s
Updates to repeat resolution, correction, and alignment compile and e.coli #368: Pull request #213 synchronize by skoren
December 19, 2023 15:01 3m 10s relax-unique-lower-threshold
relax-unique-lower-threshold
December 19, 2023 15:01 3m 10s
fix crash when there are no aligned reads with winnowmap compile and e.coli #367: Commit 542faf2 pushed by skoren
December 19, 2023 15:01 3m 0s relax-unique-lower-threshold
relax-unique-lower-threshold
December 19, 2023 15:01 3m 0s
Updates to repeat resolution, correction, and alignment compile and e.coli #366: Pull request #213 synchronize by skoren
December 19, 2023 14:16 3m 26s relax-unique-lower-threshold
relax-unique-lower-threshold
December 19, 2023 14:16 3m 26s
fix extraneous prints to match expected downstream parsers compile and e.coli #365: Commit 75c2d2c pushed by skoren
December 19, 2023 14:16 2m 56s relax-unique-lower-threshold
relax-unique-lower-threshold
December 19, 2023 14:16 2m 56s
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