#-----Location of Executables Used by MAKER/EVALUATOR
makeblastdb= #location of NCBI+ makeblastdb executable
blastn= #location of NCBI+ blastn executable
blastx= #location of NCBI+ blastx executable
tblastx= #location of NCBI+ tblastx executable
formatdb= #location of NCBI formatdb executable
blastall= #location of NCBI blastall executable
xdformat= #location of WUBLAST xdformat executable
blasta= #location of WUBLAST blasta executable
RepeatMasker=/home/joshd/software/maker/bin/../exe/RepeatMasker/RepeatMasker #location of RepeatMasker executable
exonerate=/home/joshd/software/maker/bin/../exe/exonerate/bin/exonerate #location of exonerate executable
#-----Ab-initio Gene Prediction Algorithms
snap=/home/joshd/software/maker/bin/../exe/snap/snap #location of snap executable
gmhmme3= #location of eukaryotic genemark executable
gmhmmp= #location of prokaryotic genemark executable
augustus= #location of augustus executable
fgenesh= #location of fgenesh executable
tRNAscan-SE= #location of trnascan executable
snoscan= #location of snoscan executable
#-----Other Algorithms
probuild= #location of probuild executable (required for genemark)