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<html>
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<title>Dietze Lab Publications</title>
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<h1>Ecological Forecasting Lab</h1>
<p>Our Mission:<br>
To Understand and Predict Ecological Systems</p>
</div>
</div>
<h1>Publications</h1>
<h3>This page is often out of date, for the latest information please check Prof. Dietze's <a href="https://docs.google.com/document/d/1xGv7WwAJ2V1Tj-q_Xsspk_x-v8fs4fuSdjnyJ0xLYwk">CV</a> or <a href="https://scholar.google.com/citations?user=sYi3UiwAAAAJ&hl=en">Google Scholar</a></h3>
<table>
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<img src="images/no_image.jpg">
</td><td>
<p>Dokoohaki H, B Morrison, A Raiho. S Serbin, MC Dietze. “A novel model–data fusion approach to terrestrial carbon cycle reanalysis across the contiguous U.S.” GMD <i>in review</i></p>
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<img src="images/no_image.jpg">
</td><td>
<p>Fer I, A Shiklomanov, KA Novick, CM Gough, MA Arain, J Chen, B Murphy, AR Desai, MC Dietze. 2021. “Capturing site-to-site variability through Hierarchical Bayesian calibration of a process-based dynamic vegetation model” bioRxiv 2021.04.28.441243; <a href="https://doi.org/10.1101/2021.04.28.441243">https://doi.org/10.1101/2021.04.28.441243</a></p>
</td></tr>
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<img src="images/no_image.jpg">
</td><td>
<p>Fisher JB, M Sikka, GL Block, CR Schwalm, NC Parazoo, HR Kolus, M Sok, A Wang, A Gagne-Landmann, S Lawal, A Guillaume, A Poletti, KM Schaefer, B El Masri, PE Levy, Y Wei, MC Dietze, DN Huntzinger. “The JPL Terrestrial Biosphere Model ‘Farm’” JAMES <i>in review</i></p>
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<img src="images/no_image.jpg">
</td><td>
<p>Saifuddin M, RZ Abramoff, MC Dietze, EA Davidson, AC Finzi. “Identifying Data Needed to Reduce Parameter Uncertainty in a Coupled Microbial Soil C and N Decomposition Model” <i>in review</i></p>
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<p>Meunier, Félicien; Visser, Marco; Shiklomanov, Alexey; Dietze, Michael; Guzmán, J. Antonio; Sanchez-Azofeifa, Arturo; De Deurwaerder, Hannes; Krishna Moorthy, Sruthi M.; Schnitzer, Stefan; Marvin, David; Longo, Marcos; Chang, Liu; Broadbent, Eben; Zambrano, Angelica; Muller-Landau, Helene; Detto, Matteo; Verbeeck, Hans. 2021. “Liana optical traits increase tropical forest albedo and reduce ecosystem productivity” Global Change Biology <i>in review</i></p>
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<img src="images/no_image.jpg">
</td><td>
<p>Dietze MC, RQ Thomas, J Peters, C Boettinger, AN Shiklomanov, and J Ashander. 2021. “A Community Convention for Ecological Forecasting: Output Files and Metadata” EcoEvoRxiv <a href="https://doi.org/10.32942/osf.io/9dgtq">https://doi.org/10.32942/osf.io/9dgtq</a></p>
</td></tr>
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<img src="images/no_image.jpg">
</td><td>
<p>Heilman, Kelly; Dietze, Michael; Arizpe, Alexis; Aragon, Jacob; Gray, Andrew; Shaw, John; Finley, Andrew; Klesse, Stefan; DeRose, Justin; Evans, Margaret. 2021. “Ecological forecasting of tree growth: regional fusion of tree-ring and forest inventory data to quantify drivers and characterize uncertainty” GCB in review</p>
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<img src="images/no_image.jpg">
</td><td>
<p>Bodner K, CR Firkowski, J Bennett, M Dietze, S Green, J Hughes, J Kerr, M Kunegel-Lion, S Leroux, E McIntire, P Molnar, C Simpkins, E Tekwa, A Watts, MJ Fortin. 2021. Bridging the divide between ecological forecasts and environmental decision-making. Ecosphere <i>in review</i></p>
</td></tr>
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<img src="images/no_image.jpg">
</td><td>
<p>DeRose RJ, MEK Evans, S Klesse, MP Girardin, KA Heilman, MR Alexander, A Arsenault, F Babst, M Bouchard, SMP Cahoon, EA Campbell, M Dietze, L Duchesne, D Frank, C Giebink, A Gomez-Guerrero, G Gutiérrez García, S Armando Villela Gaytán, EH Hogg, J Metsaranta, C Ols, SA Rayback, A Reid, M Ricker, PG Schaberg, JD Shaw, PF Sullivan. “The case for adding tree rings to North America’s national forest inventories: an essential tool to guide drawdown of atmospheric CO2” Nature Climate Change <i>in review</i></p>
</td></tr>
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<img src="images/no_image.jpg">
</td><td>
<p>Werbin ZR, B Hackos, MC Dietze, JM Bhatnagar. “The National Ecological Observatory Network’s soil metagenomes: assembly and basic analysis” F1000Research in review <a href="https://doi.org/10.12688/f1000research.51494.1">https://doi.org/10.12688/f1000research.51494.1</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Lofton M, JA Brentrup, WS Beck, JA Zwart, R Bhattacharya, LS Brighenti, SH Burnet, IM McCullough, B Steele,, CC Carey, KL Cottingham, MC Dietze, HA Ewing, KC Weathers, SL LaDeau,. “Using near-term forecasts and uncertainty partitioning to improve predictions of low-frequency cyanobacterial events” Ecological Applications <i>in review</i></p>
</td></tr>
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<img src="images/no_image.jpg">
</td><td>
<p>Baatz, R.; Hendricks-Franssen, H-J.; Euskirchen, E.; Debjani, S.; Dietze, M.; Ciavatta,S.; Fennel, K.; Beck, Hylke; de Lannoy, G.; Pauwels, V.; Montzka, C.; Williams, M.; Mishra, U.; Van Looy, K.L.; Bogena, H.; Adamescu, M.; Fox, A.; Görgen, K.; Naz, B.; Zeng, Y.; Vereecken, H.; 2021. “Reanalysis in Earth System Science: Towards Terrestrial Ecosystem Reanalysis” Reviews of Geophysics <i>accepted</i></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Terry C, RB Primack, M Rothendler, L Zipf, MC Dietze. 2021. “Effects of the COVID-19 pandemic on noise pollution in three protected areas in metropolitan Boston (USA)” Biological Conservation, 256:109039 <a href="https://doi.org/10.1016/j.biocon.2021.109039">https://doi.org/10.1016/j.biocon.2021.109039</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Averill C, ZR Werbin, KF Atherton, JM Bhatnagar, MC Dietze. 2020. “Soil microbiome predictability increases with spatial and taxonomic scale” Nature Ecology and Evolution <a href="https://doi.org/10.1038/s41559-021-01445-9">https://doi.org/10.1038/s41559-021-01445-9</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Oberpriller J, D Cameron, MC Dietze, F Hartig. 2020. “Towards a statistical theory for robust inference with complex computer simulations” Ecology Letters <a href="http://doi.org/10.1111/ele.13728">http://doi.org/10.1111/ele.13728</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Wheeler KI, MC Dietze. “Improving the monitoring of deciduous broadleaf phenology using the Geostationary Operational Environmental Satellite (GOES) 16 and 17” Biogeosciences 18, 1971–1985, 2021 <a href="https://doi.org/10.5194/bg-18-1971-2021">https://doi.org/10.5194/bg-18-1971-2021</a></p>
</td></tr>
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<img src="images/no_image.jpg">
</td><td>
<p>Clark JS, R Andrus, M Aubry-Kientz, Y Bergeron, M Bogdziewicz, DC Bragg, D Brockway, NL Cleavitt, S Cohen, B Courbaud, E Crone, R Daley, AJ Das, M Dietze, TJ Fahey, I Fer, JF Franklin, CA Gehring, GS Gilbert, CH Greenberg, Q Guo, J Hille Ris Lambers, I Ibanez, J Johnstone, CL Kilner, J Knops, WD Koenig, G Kunstler, JM LaMontagne, KL Legg, J Luongo, J Lutz, D Macias, E McEntire, Y Messaoud, C Moore, E Moran, JA Myers, OB Myers, C Nunez, R Parmenter, S Pearson, S Pease, R Poulton-Kamakura, E Ready, MD Redmond, CD Reid, KC Rodman, CL Scher, WH Schlesinger, AM Schwantes, E Shanahan, S Sharma, M Steele, NL Stephenson, S Sutton, J Swenson, M Swift, TT Veblen, AV Whipple, TG Whitham, A Wion, K Zhu, R Zlotin. 2021. “Continent-wide tree fecundity driven by indirect climate effects” Nature Communications 12:1242. <a href="https://doi.org/10.1038/s41467-020-20836-3">https://doi.org/10.1038/s41467-020-20836-3</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Zipkin EF, ER Zylstra, AD Wright, SP Saunders, AO Finley, MC Dietze, MS Itter, MW Tingley. 2020. “Linking ecological processes across scales with data integration” Frontiers in Ecology and the Environment 19(1):30-38 <a href="https://doi.org/10.1002/fee.2290">https://doi.org/10.1002/fee.2290</a></p>
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<p>Farrell KJ, KC Weathers, SH Sparks, JA Brentrup, CC Carey, MC Dietze, JR Foster, KL Grayson, JH Matthes, MD SanClements. 2021. “Training macrosystems scientists requires both interpersonal and technical skills” Frontiers in Ecology and the Environment 19(1):39-46 DOI: 10.1002/fee.2287</p>
</td></tr>
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<img src="images/no_image.jpg">
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<p>Rollinson CR, A Dawson, AM Raiho, JW Williams MC Dietze T Hickler, ST Jackson, J McLachlan, DJP Moore, B Pouler, T Quaife, J Steinkamp, M Trachsel. 2021. “Forest responses to last-millenium hydroclimate variability are governed by spatial variations in ecosystem sensitivity” Ecology Letters 24(3):498-508 <a href="http://dx.doi.org/10.1111/ele.13667">http://dx.doi.org/10.1111/ele.13667</a> </p>
</td></tr>
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<p>Meunier F, H Verbeeck, E Cowdery, S Schnitzer, C Smith-Martin, J Powers, X Xu, H De Deurwaerden, M Detto, M di Porcia e Brugnera, D Bonal, M Longo, M Slot, MC Dietze. 2021. “Unraveling the relative role of light and water competition between lianas and trees in tropical forests: A vegetation model analysis” Journal of Ecology 109(1):519-540 <a href="http://dx.doi.org/10.1111/1365-2745.13540">http://dx.doi.org/10.1111/1365-2745.13540</a></p>
</td></tr>
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</td><td>
<p>Ely, Kim S., Alistair Rogers, Deborah A. Agarwal, Elizabeth A. Ainsworth, Loren P. Albert, Ashehad Ali, Jeremiah Anderson, et al. 2021. “A Reporting Format for Leaf-Level Gas Exchange Data and Metadata.” Ecological Informatics 61: 101232. doi:10.1016/j.ecoinf.2021.101232</p>
</td></tr>
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<img src="images/no_image.jpg">
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<p>Shiklomanov, AN, MC Dietze, I Fer, T Viskari, SP Serbin 2020 “Cutting out the middle man: Calibrating and validating a dynamic vegetation model using remotely sensed surface reflectance” Geoscientific Model Development 14, 2603–2633, <a href="https://doi.org/10.5194/gmd-14-2603-2021">https://doi.org/10.5194/gmd-14-2603-2021</a></p>
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<p>Raiho A, MC Dietze, A Dawson, CR Rollinson, J Tipton, JS McLachlan. “Determinants of Predictability in Multi-decadal Forest Community and Carbon Dynamics” bioRxiv <a href="https://doi.org/10.1101/2020.05.05.079871">https://doi.org/10.1101/2020.05.05.079871</a></p>
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<p>Finzi AC, MA Giasson, A Barker Plotkin, EA Davidson, MC Dietze, AM Ellison, SD Frey, E Goldman, TF Keenan, WJ Munger, SV Ollinger, N Pederson, AD Richardson, K Savage, J Tang, JR Thompson, CA Williams, Z Zhou, DR Foster. 2019. “Carbon Budget of the Harvard Forest Long-Term Ecological Research Site: Pattern, Process and Response to Global Change” Ecological Monographs 90(4): e01423 <a href="https://doi.org/10.1002/ecm.1423">https://doi.org/10.1002/ecm.1423</a></p>
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<p>Koven CD , RG Knox, RA Fisher, J Chambers, BO Christoffersen, SJ Davies, M Detto, M Dietze, B Faybishenko, J Holm, M Huang, M Kovenock, LM Kueppers, D Lawrence, G Lemieux, E Massoud, N McDowell, H C Muller-Landau, J Needham, R J Norby, T Powell, A Rogers, S Serbin, J K Shuman, A L S Swann, C Varadharajan, A P Walker, S J Wright, C Xu “Benchmarking and Parameter Sensitivity of Physiological and Vegetation Dynamics using the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) at Barro Colorado Island, Panama” Biogeosciences 17: 3017-3044 <a href="https://doi.org/10.5194/bg-17-3017-2020">https://doi.org/10.5194/bg-17-3017-2020</a></p>
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<p>Reyer CPO, R Silveyra Gonzalez, K Dolos, F Hartig, Y Hauf, M Noack, P Lasch-Born, T Rötzer, H Pretzsch, H Meesenburg, S Fleck, M Wagner, A Bolte, TGM Sanders, P Kolari, A Mäkelä, T Vesala, I Mammarella, J Pumpanen, G Matteucci, A Collalti, E D’Andrea, L Krupkova, J Krejza, A Ibrom, K Pilegaard, D Loustau, JM Bonnefond, P Berbigier, D Picart, S Lafont, M Dietze, D Cameron, M Vieno, H Tian, A Palacios, V Cicuendez, M Büchner, S Lange, J Volkholz, H Kim, GP Weedon, J Sheffield, I Vega del Valle, F Suckow, JA Horemans, S Martel, F Bohn, J Steinkamp, A Chikalanov, K Frieler. 2019. The PROFOUND database for evaluating vegetation models and simulating climate impacts on forest stands. Earth System Science Data <a href="https://doi.org/10.5194/essd-12-1295-2020">https://doi.org/10.5194/essd-12-1295-2020</a></p>
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<p>McDowell NG, CD Allen, K Anderson-Teixeira, BH Aukema, B Bond-Lamberty, J Clark, M Dietze, C Grossiord, A Hanbury-Brown, RB Jackson, DJ Johnson, L Kueppers, JW Lichstein, K Ogle, B Poulter, R Seidl, MG Turner, M Uriarte, AP Walker, C Xu. 2019. “Pervasive shifts in forest dynamics in a changing world” Science 368 (6494), eaaz9463 DOI: 10.1126/science.aaz9463</p>
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<img src="images/no_image.jpg">
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<p>Fer I, AK Gardella, AN Shiklomanov, SP Serbin, MG De Kauwe, A Raiho, MR Johnston, A Desai, T Viskari, T Quaife, DS LeBauer, EM Cowdery, R Kooper, JB Fisher, B Poulter, MJ Duveneck, FM Hoffman, W Parton, J Mantooth, EE Campbell, KD Haynes, K Schaefer, KR Wilcox, MC Dietze, Beyond Modeling: A Roadmap to Community Cyberinfrastructure for Ecological Data-Model Integration. Global Change Biology doi:10.1111/gcb.15409</p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Redmond MD, Law DJ, Field JP, Meneses N, Carroll CJW, Wion AP, Breshears DD, Cobb NS, MC Dietze, RE Gallery. 2019. “Targeting Extreme Events: Complementing Near-Term Ecological Forecasting with Rapid Experiments and Regional Surveys” Frontiers in Environmental Science 7:183 <a href="https://doi.org/10.3389/fenvs.2019.00183">https://doi.org/10.3389/fenvs.2019.00183</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Averill C, JM Bhatnagar, MC Dietze, WD Pearse, SN Kivlin. “Global imprint of mycorrhizal fungi on whole-plant nutrient economics” PNAS 16(46): 23163-23168 <a href="https://doi.org/10.1073/pnas.1906655116">https://doi.org/10.1073/pnas.1906655116</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Wheeler K, M Dietze 2019 “Modeling midday NDVI from the newest Geostationary Operational Environmental Satellite (GOES-16)” Remote Sensing Remote Sens. 2019, 11, 2507 <a href="https://doi.org/10.3390/rs11212507">https://doi.org/10.3390/rs11212507</a></p>
</td></tr>
<tr><td width=250>
<img src="images/no_image.jpg">
</td><td>
<p>Dietze M, H Lynch. 2019. Forecasting a bright future for ecology. Frontiers in Ecology and the Environment. 17(1):3 <a href="https://doi.org/10.1002/fee.1994">https://doi.org/10.1002/fee.1994</a>
</p>
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<tr><td width=250>
<img src="images/shiklomanov2020EA.png" width=250 />
</td><td>
<p>
Shiklomanov, A. N., Cowdery, E. M., Bahn, M., Byun, C., Jansen, S., Kramer, K., et al. 2020.
Does the leaf economic spectrum hold within plant functional types? A Bayesian multivariate trait meta-analysis.
Ecological Applications, 30(3).
<a href="https://doi.org/10.1002/eap.2064">https://doi.org/10.1002/eap.2064</a>
</p>
</td></tr>
<tr><td width=250>
<img src="images/Longo2019B.jpeg" width=250 />
</td><td>
<p>Longo M, RG Knox, NM Levine, ALS Swann, DM Medvigy, MC Dietze, Y Kim, K Zhang, D Bonal, B Burban, PB Camargo, MN Hayek, SR Saleska, R da Silva, RL Bras, SC Wofsy, PR Moorcroft. 2019. The biophysics, ecology, and biogeochemistry of functionally diverse, vertically- and horizontally-heterogeneous ecosystems: the Ecosystem Demography Model, version 2.2 — Part 2: Model evaluation. Geoscientific Model Development Discussions https://doi.org/10.5194/gmd-2019-71</p>
</td></tr>
<tr><td width=250>
<img src="images/Longo2019A.jpeg" width=250 />
</td><td>
<p>Longo M, RG Knox, DM Medvigy, NM Levine, MC Dietze, Y Kim, ALS Swann, K Zhang, CR Rollinson, RL Bras, SC Wofsy, PR Moorcroft. 2019. The biophysics, ecology, and biogeochemistry of functionally diverse, vertically- and horizontally-heterogeneous ecosystems: the Ecosystem Demography Model, version 2.2 — Part 1: Model description. Geoscientific Model Development Discussions https://doi.org/10.5194/gmd-2019-45</p>
</td></tr>
<tr><td width=250>
<img src="images/Viskari2019.gif" width=250 />
</td><td>
<p>Viskari T, A Shiklomanov, M.C. Dietze and S.P. Serbin. The influence of canopy radiation parameter uncertainty on model projections of carbon and energy cycling. PLOS One <a href="https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0216512">https://doi.org/10.1371/journal.pone.0216512</a>; preprint bioRxiv https://doi.org/10.1101/618066</p>
</td></tr>
<tr><td width=250>
<img src="images/ISME2019.png" width=250 />
</td><td>
<p>Averill C, L Cates, M Dietze, J Bhatnagar. 2019. Spatial vs. temporal controls over soil fungal community similarity at global scale. ISME Journal DOI:10.1038/s41396-019-0420-1 <a href="https://www.nature.com/articles/s41396-019-0420-1">link</a></p>
</td></tr>
<tr><td width=250>
<img src="images/McCabe2019FEE.jpeg" width=250 />
</td><td>
<p>McCabe T, M Dietze. 2018. Scaling contagious disturbance: a spatially-implicit dynamic model. Frontiers in Ecology and Evolution 7:64. <a href="https://doi.org/10.3389/fevo.2019.00064">https://doi.org/10.3389/fevo.2019.00064</a></p>
</td></tr>
<tr><td width=250>
</td><td>
<p>Travis A, MC Dietze, R Booth. 2018. Climate or disturbance: temperate forest structural change and carbon sink potential. bioRxiv: https://doi.org/10.1101/478693</p>
</td></tr>
<tr><td width=250>
<img src="images/Raczka2019.jpeg" width=250 />
</td><td>
<p>Raczka B, MC Dietze, SP Serbin, KJ Davis. 2018. Quantifying parametric uncertainty in the simulation of decadal to centennial scale carbon sequestration in Northern Wisconsin. JGR-Biogeosciences 123(12):3570-3588 <a href="http://dx.doi.org/10.1029/2018JG004504">http://dx.doi.org/10.1029/2018JG004504</a> <a href="manuscripts/2018JG004504.pdf">PDF</a></p>
</td></tr>
<tr><td width=250>
<img src="images/v2_NEON_PNAS_Conceptual.jpg" width=250 />
</td><td>
<p>Dietze MC, A Fox, L Beck-Johnson, JL Betancourt, MB Hooten, CS Jarnevich, TH Keitt, MA Kenney, CM Laney, LG Larsen, HW Loescher, CK Lunch, B Pijanowski, JT Randerson, EK Read, AT Tredennick, R Vargas, KC Weathers, EP White. 2018. Iterative near-term ecological forecasting: Needs, opportunities, and challenges. Proceedings of the National Academy of Sciences <a href="https://doi.org/10.1073/pnas.1710231115">DOI</a> <a href="manuscripts/Dietze2018PNAS.pdf">pdf</a>.</p>
</td></tr>
<tr><td width=250>
<img src="images/Fer2018Emulator.jpeg" width=250 />
</td><td>
<p>Fer I, R Kelly, P Moorcroft, AD Richardson, E Cowdery, MC Dietze. 2018. Linking big models to big data: efficient ecosystem model calibration through Bayesian model emulation. Biogeosciences 15:5801-5830 <a href="https://www.biogeosciences.net/15/5801/2018/">open access</a> </p>
</td></tr>
<tr><td width=250>
<img src="images/MEE2018.jpeg" width=250 />
</td><td>
<p>Asbjornsen H, JL Campbell, KA Jennings, MA Vadeboncoeur, C McIntire, PH Templer, RP Phillips, TL Bauerle, MC Dietze, SD Frey, PM Groffman, R Guerrieri, PJ Hanson, EP Kelsey, AK Knapp, NG McDowell, P Meir, KA Novick, SV Ollinger, WT Pockman, PG Schaberg, SD Wullschleger, MD Smith, L Rustad. 2018. Guidelines and considerations for designing precipitation manipulation experiments in forest ecosystems. Methods in Ecology and Evolution 9(12):2310-2325. DOI:10.1111/2041-210X.13094 <a href="https://doi.org/10.1111/2041-210X.13094">link</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Babst2018.jpeg" width=250 />
</td><td>
<p>Babst F, P Bodesheim, N Charney, A Friend, M Girandin, S Klesse, DJP Moore, K Seftigen, J Björklund, O Bouriaud, A Dawson, RJ DeRose, M Dietze, A Eckes, B Enquist, DC Frank, MD Mahecha, B Poulter, S Record, V Trouet, R Turton, Z Zhang, MEK Evans. 2018. When tree rings go global: challenges and opportunities for retro- and prospective insight. Quaternary Science Reviews 197:1-20 <a href="manuscripts/1-s2.0-S0277379118300891-main.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Averill2018GCB.jpeg" width=250 />
</td><td>
<p>Averill C, MC Dietze, JM Talbot. 2018. Continental-scale nitrogen pollution is shifting forest mycorrhizal associations and soil carbon stocks. Global Change Biology 24(10):4544-4553 DOI:10.1111/gcb.14368 <a href="https://onlinelibrary.wiley.com/doi/abs/10.1111/gcb.14368">open access</a></p>
</td></tr>
<tr><td width=250>
</td><td>
<p>Dietze M, C Averill, J Foster, K Wheeler. 2018. Ecological Forecasting. Oxford Bibliographies DOI: 10.1093/OBO/9780199830060-0205 <a href="http://www.oxfordbibliographies.com/view/document/obo-9780199830060/obo-9780199830060-0205.xml">link</a> <a href="manuscripts/EcologicalForecasting2018OxfordBibliographies.pdf">static PDF</a> </p>
</td></tr>
<tr><td width=250>
<img src="images/Kleindl2018.jpeg" width=250 />
</td><td>
<p>Kleindl, W. J., P. C. Stoy, M. Binford, A. Desai, M. C. Dietze, Schultz, G. Starr, C. Staudhammer, D. J. A. Wood. 2018. Toward a Socioecological Theory of Forest Macrosystems. Forests 9(4):200 DOI: 10.3390/f9040200</p>
</td></tr>
<tr><td width=250>
</td><td>
<p>Fernandes A, Rollinson CR, Kearney WS, Dietze MC, Fagherazzi S. 2018. Declining radial growth response of coastal forests to hurricanes and nor'easters. Journal of Geophysical Research: Biogeosciences 123 (3), 832-849</p>
</td></tr>
<tr><td width=250>
<img src="images/Massoud2017.jpg" width=250 />
</td><td>
<p>Massoud, E. C., Huisman, J., Benincà, E., Dietze, M. C., Bouten, W. and Vrugt, J. A. (2017), Probing the limits of predictability: data assimilation of chaotic dynamics in complex food webs. Ecol Lett. doi:10.1111/ele.12876 <a href="manuscripts/Massoud_et_al-2017-Ecology_Letters.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Dietze2017EA.jpg" width=250 />
</td><td>
<p>Dietze, M. C. (2017), Prediction in ecology: a first-principles framework. Ecol Appl, 27: 2048-2060. doi:10.1002/eap.1589 <a href="manuscripts/eap1589.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Fisher2017.png" width=250 />
</td><td>
<p>Fisher RA, Koven CD, Anderegg WRL, et al. 2017. Vegetation demographics in Earth System Models: A review of progress and priorities. Glob Change Biol. https://doi.org/10.1111/gcb.13910 <a href="manuscripts/Fisher_et_al-2017-Global_Change_Biology.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Marlon2017.jpg" width=250 />
</td><td>
<p>Marlon, J. R., Pederson, N., Nolan, C., Goring, S., Shuman, B., Robertson, A., Booth, R., Bartlein, P. J., Berke, M. A., Clifford, M., Cook, E., Dieffenbacher-Krall, A., Dietze, M. C., Hessl, A., Hubeny, J. B., Jackson, S. T., Marsicek, J., McLachlan, J., Mock, C. J., Moore, D. J. P., Nichols, J., Peteet, D., Schaefer, K., Trouet, V., Umbanhowar, C., Williams, J. W., and Yu, Z.: Climatic history of the northeastern United States during the past 3000 years, Clim. Past, 13, 1355-1379, https://doi.org/10.5194/cp-13-1355-2017, 2017. <a href="manuscripts/cp-13-1355-2017.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Rollinson2017.jpeg" width=250 />
</td><td>
<p>Rollinson, C. R., Liu, Y., Raiho, A., Moore, D. J.P., McLachlan, J., Bishop, D. A., Dye, A., Matthes, J. H., Hessl, A., Hickler, T., Pederson, N., Poulter, B., Quaife, T., Schaefer, K., Steinkamp, J. and Dietze, M. C. (2017), Emergent climate and CO2 sensitivities of net primary productivity in ecosystem models do not agree with empirical data in temperate forests of eastern North America. Glob Change Biol. Accepted Author Manuscript. doi:10.1111/gcb.13626 <a href="http://onlinelibrary.wiley.com/doi/10.1111/gcb.13626/full">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/gcbb12420.png" width=250 />
</td><td>
<p>LeBauer, D., Kooper, R., Mulrooney, P., Rohde, S., Wang, D., Long, S. P. and Dietze, M. C. (2017), betydb: a yield, trait, and ecosystem service database applied to second-generation bioenergy feedstock production. GCB Bioenergy. doi:10.1111/gcbb.12420 <a href="http://onlinelibrary.wiley.com/doi/10.1111/gcbb.12420/full">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/journal.pone.0151935.g003.PNG" width=250 />
</td><td>
<p>Goring S, DJ Mladenoff, CV Cogbill, S Record, CJ Paciorek, ST Jackson, MC Dietze, A Dawson, J Matthes, JS McLachlan, JW Williams. 2016. Novel and lost forests in the upper Midwestern United States, from new estimates of settlement-era composition, stem density, and biomass. PLOS ONE <a href="http://dx.doi.org/10.1371/journal.pone.0151935">pdf</a> doi:10.1371/journal.pone.0151935</p>
</td></tr>
<tr><td width=250>
<img src="images/Rogers2017.jpeg" width=250 />
</td><td>
<p>Rogers A, BE Medlyn, J Dukes, G Bonan, S von Caemmerer, MC Dietze, J Kattge, ADB Leakey, LM Mercado, U Niinemets, IC Prentice, SP Serbin, S Sitch, DA Way, S Zaehle. 2017. "A Roadmap for Improving the Representation of Photosynthesis in Earth System Models" New Phytologist 213(1):22-42 DOI: 10.1111/nph.14283 <a href="manuscripts/Rogers_et_al-2017-New_Phytologist.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
</td><td>
<p>Padhy et al 2016. An Architecture for Automatic Deployment of Brown Dog Services At Scale into Diverse Computing Infrastructures. XSEDE16. ACM SIG Proceedings. 10.1145/2949550.2949647</p>
</td></tr>
<tr><td width=250>
<img src="images/Shiklomanov2016.png" width=250 />
</td><td>
<p>Shiklomanov. A, MC Dietze, T Viskari, PA Townsend, SP Serbin. 2016 "Quantifying the influences of spectral resolution on uncertainty in leaf trait estimates through a Bayesian approach to RTM inversion" Remote Sensing of the Environment 183: 226-238</p>
</td></tr>
<tr><td width=250>
</td><td>
<p>Lokupitiya et al. (NACP synthesis). 2016. Carbon and Energy Fluxes in Cropland Ecosystems: A Model-Data Comparison. Biogeochemistry 129:53-76 <a href="manuscripts/art%3A10.1007%2Fs10533-016-0219-3 (2).pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Matthes2016.jpg" width=250 />
</td><td>
<p> Matthes, JH, S Goring, JW Williams, MC Dietze. 2016 "Benchmarking historical CMIP5 plant functional types across the Upper Midwest and Northeastern United States" Journal of Geophysical Research - Biogeosciences. DOI: 10.1002/2015JG003175 <a href="manuscripts/Matthes_et_al-2016-Journal_of_Geophysical_Research-_Biogeosciences.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Miller2016.jpg" width=250 />
</td><td>
<p>Miller, AD, MC Dietze, EH DeLucia, KT Anderson-Teixeira. 2015. Alteration of forest succession and carbon cycling under elevated CO2. Global Change Biology 22 (1), 351-363 DOI: 10.1111/gcb.13077 <a href="manuscripts/Miller_et_al-2016-Global_Change_Biology.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
</td><td>
<p>Schlesinger et al. 2015. Forest biogeochemistry in response to drought. Global Change Biology 10.1111/gcb.13105 <a href="manuscripts/Schlesinger_et_al-2015-Global_Change_Biology.pdf">pdf</a> </p>
</td></tr>
<tr><td width=250>
<img src="images/Hu2015.jpg" width=250 />
</td><td>
<p>Hu et al. The Blazing Tundra? Climate Change, Fire-Regime Shifts, and Biogeochemical Consequences. Frontiers in Ecology and the Environment 13(7): 369-377, doi:10.1890/150063 <a href="manuscripts/Hu2015.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Medlyn2015NCC_Fig3.jpg" width=250 />
</td><td>
<p>Medlyn et al. Using Ecosystem Experiments to Improve Vegetation Models: Lessons Learnt from the Free-Air CO2 Enrichment Model-Data Synthesis. Nature Climate Change 5:528-534 DOI: 10.1038/NCLIMATE2621 <a href="manuscripts/nclimate2621.pdf">pdf</a> </p>
</td></tr>
<tr><td width=250>
<img src="images/Becknell2015.jpg" />
</td><td>
<p>Becknell et al. 2015. A macrosystems ecology approach to assessing the effects of changing management, climate, and disturbance on forest processes. Bioscience 65(3):263-274<a href="manuscripts/Becknell_BioScience-2015.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/bd-graphic-largerwshadow.png" />
</td><td>
<p>Padhy et al 2015 "Brown Dog: Leveraging Everything Towards Autocuration" IEEE Big Data Conference <i>in review</i> <a href="manuscripts/bigdata2015.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Viskari2015.jpg" />
</td><td>
<p>Viskari et al. 2015 Model-data assimilation of multiple phenological observations to constrain and forecast leaf area index. Ecological Applications 25(2): 546-558 <a href="manuscripts/14-0497E1.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/bd-graphic-largerwshadow.png" />
</td><td>
<p>McHenry K, J Lee, M Dietze, P Kumar, B Minsker, R Marciano, L Marini, R Kooper, D Mattson. 2014. DIBBs Brown Dog, PaaS for SaaS for PaaS. Proceedings of XSEDE14 <a href="manuscripts/BrownDog.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Dietze2014EL.jpg" width="250"/>
</td><td>
<p>Dietze M, J Matthes. 2014. A general ecophysiological framework for modeling the impact of pests and pathogens on forest ecosystems. Ecology Letters 17: 1418-1426</p>
</td></tr>
<tr><td width=250>
<img src="images/Matheny2014JGRB.jpg" width="250" />
</td><td>
<p>Matheny et al. Characterizing the diurnal patterns of errors in land-surface models' prediction of evapotranspiration: an NACP analysis. J. Geophys. Res. Biogeosci., 119, 1458-1473, doi:10.1002/2014JG002623 <a href="manuscripts/49-jgrg20246.pdf">pdf</a> </p>
</td></tr>
<tr><td width=250>
<img src="images/Walker2014JGRB.jpg" width="250" />
</td><td>
<p>Walker et al. Model-experiment synthesis at two temperate forest free-air CO2 enrichment experiments. Geophys. Res. Biogeosci., 119, 937-964, doi:10.1002/2013JG002553 <a href="manuscripts/48-jgrg20222.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/DeKauwe2014NP.jpg" width="250" />
</td><td>
<p>De Kauwe et al. Where does the carbon go? A model-data intercomparison of carbon allocation at two temperate forest free-air CO2 enrichment sites. New Phytologist 203: 883-899 doi: 10.1111/nph.12847 <a href="manuscripts/nph12847.pdf">pdf</a></p>
</td>
<tr>
<tr><td width=250>
<img src="images/Fisher2014Biogeosciences.jpg" alt="Ensemble Mean CO2 flux in Alaska" width="250">
</td><td>
<p>Fisher et al. 2014. Carbon cycle uncertainty in the Alaskan Arctic. Biogeosciences 11, 4271-4288. doi:10.5194/bg-11-4271-2014 <a href="manuscripts/bg-11-4271-2014.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Nui2014Ecosphere.jpg" alt="Data Assimilation System" width="250">
</td><td>
<p>Niu et al. The role of data assimilation in predictive ecology. Ecosphere, 5 (5):10.1890/ES13-00273.1 <a href="manuscripts/es13-00156%2E1.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Dietze2014JGRB_Fig2.jpg" alt="Proportion of variance attributed to different parameters across 17 PFTs" width="250">
</td><td>
<p>Dietze et al. 2014. A quantitative assessment of a terrestrial biosphere model's data needs
across North American biomes. Journal of Geophysical Research Biogeosciences 119, 286-300, doi:10.1002/ 2013JG002392.<a href="manuscripts/jgrg20170.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Zaehle2014.jpg" alt="N x CO2 pathways" width="250" >
</td><td>
<p>Zaehle et al. 2014. Evaluation of 11 terrestrial carbon nitrogen cycle models against observations from two temperate Free-Air CO2 Enrichment studies. New Phytologist DOI: 10.1111/nph.12697 <a href="manuscripts/nph12697.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/AR_NSC_Fig1.png" alt="NSC allocation" width="250" >
</td><td>
<p>Dietze et al. 2014. Nonstructural Carbon in Woody Plants. Annual Reviews in Plant Biology <a href="manuscripts/annurev-arplant-050213-040054.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/PR2013.jpg" alt="Alt Sampling of Photosynthesis" width="250" >
</td><td>
<p>Dietze M. 2014. Gaps in knowledge and data driving uncertainty in models of photosynthesis. Photosynthesis Research 119:3-14 DOI: 10.1007/s11120-013-9836-z <a href="manuscripts/art%3A10.1007%2Fs11120-013-9836-z.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Wang2013.jpg" alt="Yield of 21 tree spp" width="250" >
</td><td>
<p>Wang et al. 2013. Ecophysiological screening of tree species for biomass production: trade-off between production and water use. Ecosphere 4 (11):10.1890/ES13-00156.1 NOV 2013 <a href="manuscripts/es13-00156%2E1.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/nph12454.jpg" alt="Scale-dependence of leaf N vs Vcmax" width="250" >
</td><td>
<p>Feng, X. and M. Dietze. 2013. Scale-dependence in the effects of leaf economic traits on photosynthesis:
Bayesian parameterization of photosynthesis models. New Phytologist DOI: 10.1111/nph.12454 <a href="manuscripts/nph12454.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/1-s2.0-S0016703713003992-main.jpg" alt="C3 vs C4 isotopes" width="250" >
</td><td>
<p>Urban et al. 2013. Classifying del13C values of individual grains of C3 and C4 grass pollen using a hierarchical Bayesian approach. Geochimica et Cosmochimica Acta.
121: 168-176 <a href="manuscripts/urban-2013-gca.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/lebauer-dietze-bolker.jpg" alt="distribution table" width="250" >
</td><td>
<p>LeBauer D.S., M.C. Dietze, B.M. Bolker. 2013. Translating Probability Density Functions: From R to BUGS and Back Again. R Journal Vol. 5/1, June, 207-209 <a href="manuscripts/lebauer-dietze-bolker.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/Stoy2013_Fig4.jpg" alt="Fig 4 Composite coherence spectrum" width="250" >
</td><td>
<p>Stoy et al. 2013. Evaluating the agreement between measurements and models of net ecosystem exchange at different times and time scales using wavelet coherence: an example using data from the North American Carbon Program Site-Level Interim Synthesis. Biogeosciences 10:6893-6909 <a href = "manuscripts/bg-10-6893-2013.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/DeKauwe2013.jpg" alt="WUE enhancement" width="250" >
</td><td>
<p>De Kauwe et al. 2013. Water use and water use efficiency at elevated CO2: a model-data intercomparison at two contrasting temperate forest FACE sites. Global Change Biology 19, 1759 - 1779 DOI: 10.1111/gcb.12164 <a href="manuscripts/gcb12164_final.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/PCE2013.jpg" alt="PalEON Summer Course 2012" width="250" >
</td><td>
<p>Dietze, M.C., D. LeBauer, R. Kooper. 2013. On improving the communication between models and data. Plant, Cell, and Environment 36:1575-1585 <a href = "manuscripts/pce12043.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/WangPoplar_fig5A.jpg" alt="PEcAn workflow" width="250" >
</td><td>
<p>Wang, D, D. LeBauer, M.C. Dietze. 2013. Predicted yields of short-rotation hybrid poplar (Populus spp.) for the contiguous US. Ecological Applications 23:944-958 <a href="manuscripts/12-0854.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/PEcAn.jpg" alt="PEcAn workflow" width="250" >
</td><td>
<p>LeBauer, D.S., D. Wang, K.T. Richter, C.C. Davidson, M.C. Dietze. 2013. Feedbacks between measurements and ecosystem models. Ecological Monographs 83(2), 133-154 <a href="manuscripts/12-0137.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/2012JG001960-pip.Fig7.jpg" alt="GPP vs RH" width="250" >
</td><td>
<p>Schaefer, K. et al. 2012. A Model-Data Comparison of Gross Primary Productivity: Results from the North American Carbon Program Site Synthesis. JGR-B 117:G03010 doi:10.1029/2012JG001960 <a href="manuscripts/jgrg936.pdf">pdf</a></p>
</td></tr>
<tr><td width=250>
<img src="images/forests-03-00370.Fig5A.jpg" alt="Poplar Rotation" width="250" >
</td><td>
<P>Davis, S., M. Dietze, E. DeLucia, C. Field, S. Hamburg, S. Loarie, W. Parton, M. Potts, B. Ramage, D. Wang, H. Youngs, S. Long. 2012. Harvesting carbon from eastern US forests. Forests 3(2), 370-397; doi:10.3390/f3020370 <a href="manuscripts/forests-03-00370.pdf">pdf</a></P>
</td></tr>
<tr><td width=250>
<img src="images/Kumar_ICCS2012.fig4.jpg" alt="CRUNCEP downscaling" width="250" >
</td><td>
<p>Kumar, J., B. Brooks, P. Thornton, M. Dietze. 2012. Sub-daily Statistical Time Downscaling of Meteorological Variables Using
Neural Networks. Procedia Computer Science 9, 887-896 <a href="manuscripts/Kumar2012-ICCS.pdf">pdf</a></p>
</td></tr><tr><td width=250>
<img src="images/KeenanGCB2012.Fig4.jpg" alt="Variance Residuals" width="250" >
</td><td>
<p>Keenan et al. (NACP synthesis). 2012. Terrestrial biosphere model performance for inter-annual variability of land-atmosphere CO2 exchange Global Change Biology 18(6):1971-1987; doi: 10.1111/j.1365-2486.2012.02678.x <a href="manuscripts/gcb2678.pdf">pdf</a></p>
</td></tr><tr><td width=250>
<img src="images/gcbb1166.Table1.jpg" alt="" width="250" >
</td><td>
<p>Nair S. Surendran, S. Kang, X. Zhang, F. Miguez, R.C. Izaurralde, W.M. Post, M.C. Dietze, L.R. Lynd, and S.D.Wullschleger. Bioenergy crop models: Descriptions, data requirements and future challenges. Global Change Biology Bioenergy <a href="manuscripts/gcbb1166.pdf">pdf</a> </p>
</td></tr><tr><td width=250>
<img src="images/Richardson_NACP_Phenology_Fig1.jpg" alt="GPP phenology" width="250" >
</td><td>
<p>Richardson et al. (NACP synthesis). 2012. Terrestrial biosphere models need better representation of vegetation phenology: Results from the North American Carbon Program Interim Synthesis. Global Change Biology 18, 566–584, doi: 10.1111/j.1365-2486.2011.02562.x <a href="manuscripts/gcb2562.pdf">pdf</a></p>
</td></tr><tr><td width=250>
<img src="images/gcbb1167.fig6.jpg" alt="Miscanthus GPP" width="250" >
</td><td>
<p>Wang, D., M.W. Maughan, J. Sun, X. Feng, F. Miguez, D.K. Lee, M.C. Dietze. 2012 Impacts of nitrogen allocation on growth and photosynthesis of Miscanthus (<i>Miscanthus x giganteus</i>) Global Change Biology Bioenergy <a href="manuscripts/gcbb1167.pdf">pdf</a> </p>
</td></tr><tr><td width=250>
<img src="images/Hicke.thumbnail.jpg" alt="Insect Disturbance Flow Chart" width="250" >
</td><td>
<p>Hicke et al. (NACP synthesis). 2012. The effects of biotic disturbances on the North American carbon cycle. Global Change Biology 18:7-34. <A href="manuscripts/gcb2543.pdf">pdf</a></p>
</td></tr><tr><td width=250>
<img src="images/DietzeSpectraHa1Large.jpg" alt="Harvard Spectra" width="250" >
</td><td>
<p>Dietze et. al. (NACP synthesis). 2011. Identifying the time scales that dominate model error: A North American synthesis of the spectral properties of ecosystem models. JGR-Biogeosciences 116, G04029, doi:10.1029/2011JG001661 <a href="manuscripts/2011JG001661.pdf">pdf</a></p>
</td></tr><tr><td width=250>
<img src="images/FIAMORT_eastern_forest.jpg" alt="Eastern Forests" width="250" >
</td><td>
<p>Dietze, M., P. Moorcroft. 2011. Tree mortality in the eastern and central U.S.: Patterns and drivers. Global Change Biology 17(11): 3312-3326. doi: 10.1111/j.1365-2486.2011.02477.x <a href="manuscripts/DietzeGCB2011.pdf">pdf</A> </p>
</td></tr><tr><td width=250>
<img src="images/DietzeLatimerForestModels.thumbnail.jpg" width="250" >
</td><td>
<p>Dietze, M.C., A.M. Latimer. 2011. Forest Simulators. <i>Invited Chapter in:</i> Sourcebook in Theoretical Ecology (A. Hastings and L. Gross, eds.), University of California Press, Berkeley, CA <a href="manuscripts/SourcebookTheorEcol_ForestSimulators_pg.pdf">pdf</a> </p>
</td></tr><tr><td width=250>
</td><td>
<p>Feng, X., M.C. Dietze. 2011. Prairie yield, moisture and nitrogen content response to harvest time. Aspects of Applied Biology 112, Biomass and Energy Crops IV, 271-277.</p>
</td></tr><tr><td width=250>
<img src="images/Hatala2011.thumbnail.jpg" width="250" >
</td><td>
<p>Hatala, J., M. Dietze, Interagency Whitebark Pine Monitoring Working Group, K Kendall, D Six, R Crabtree, P Moorcroft. 2011. An ecosystem model of white pine blister rust (Cronartium ribicola) spread in whitebark pine (Pinus albicaulis) of the Greater Yellowstone Ecosystem. Ecological Applications 21(4):1138-1153 <a href="manuscripts/Hatala_EcoApp_reprint.pdf">pdf</a></p>
</td></tr><tr><td width=250>
<img src="images/miguez-dietze-kemanian.thumbnail.jpg" width="250" >
</td><td>
<p>Miguez, F.E., M.C. Dietze, A. Kemanian. 2011. Modeling tools and strategies for developing sustainable feedstock supplies. <i>Invited chapter in:</i> Sustainable Alternative Fuel Feedstock Opportuniteis, Challenges and Roadmaps for Six U.S. Regions. pp. 319-338. <A HREF="manuscripts/Chapter_19__Miguez__Modeling_Tools_511FFEFCF5ACE.pdf">pdf</A></p>
</td></tr><tr><td width=250>
</td><td>
<p>Wang, D. M.W. Maughan, J. Sun, X. Feng, F. Miguez, DK Lee, M.C. Dietze. 2011. Impacts of canopy position and nitrogen on nitrogen allocation and photosynthesis of switchgrass (Panicum virgatum L.). Aspects of Applied Biology 112, Biomass and Energy Crops IV, 341-351.</p>
</td></tr><tr><td width=250>
<img src="images/schwalm.nacp.thumbnail.jpg" width="250" >
</td><td>
<p>Schwalm, C et al. (NACP synthesis). 2010. A model-data intercomparison of CO2 exchange across North America: Results from the North American Carbon Program Site Synthesis. Journal of Geophysical Research Biogeosciences VOL. 115, G00H0 doi:10.1029/2009JG001229 <a href="manuscripts/schwalm.nacp.2010.pdf">pdf</A></p>
</td></tr><tr><td width=250>
<img src="images/WangGCBB2010.thumbnail.jpg" width="250" >
</td><td>
<p>Wang, D., D. LeBauer, M.C. Dietze. 2010. A quantitative review comparing the yield of switchgrass in monocultures and mixtures in relation to climate and management factors. Global Change Biology Bioenergy 2(1): 16-25 <A href="manuscripts/WangGCBB2010.pdf" >pdf</A></p>
</td></tr><tr><td width=250>
<img src="images/ClarkMonographs2010.thumbnail.jpg" width="250" >
</td><td>
<P>Clark, JS, D Bell, C Chu, B Courbaud, M Dietze, M Hersh, J HilleRisLambers, Ines Ibanez, S LaDeau, Sean McMahon, J Metcalf, J Mohan, E Moran, L Pangle, S Pearson, C Salk, Z Shen, D Valle, and P Wyckoff.
2010. HIGH DIMENSIONAL COEXISTENCE BASED ON INDIVIDUAL VARIATION: A SYNTHESIS OF EVIDENCE. Ecological Monographs 80(4):569-608.<A HREF="manuscripts/ClarkMonographs2010.pdf">pdf</A></P>
</td><td>
</td></tr><tr><td width=250>
<img src="images/McMahon2009_Review.thumbnail.jpg" width="250" >
</td><td>
<P>McMahon, S., M. Dietze, M. Hersh, E. Moran, J. Clark. 2009. A PREDICTIVE FRAMEWORK TO UNDERSTAND FOREST RESPONSES TO GLOBAL CHANGE <I>Invited chapter in: </I>The Year in Ecology
and Conservation Biology. 1162:221-236. <a href="manuscripts/McMahon2009_Review.pdf">pdf</a></P>
</td></tr><tr><td width=250>
</td><td>
<P>Clark, J.S., D. Bell, M. Dietze, M. Hersh, I. Ibanez, S. LaDeau, S. McMahon, J. Metcalf, E. Moran, L. Pangle, and M. Wolosin. 2010. Models for demography of plant populations. in T. O'Hagan and M. West (eds), The Oxford Handbook of Applied Bayesian Analysis, Oxford University Press. <A HREF="manuscripts/HABAchapter2010.pdf">pdf</A></P>
</td></tr><tr><td width=250>
<img src="images/IbanezetalGCB09.thumbnail.jpg" width="250" >
</td><td>
<P>Ibáñez,I., Clark, J.S. and Dietze, M. 2009. Estimating the performance of potential migrant species. Global Change Biology 15:1173-1188.<A href="manuscripts/IbanezetalGCB09.pdf" >pdf</A> </P>
</td></tr><tr><td width=250>
<img src="images/GapDynamics.JPG" width="250" >
</td><td>
<P>Dietze, M., Clark J.S. 2008. Rethinking gap dynamics: the impact of damaged trees and sprouts. Ecological Monographs. 78(3):331-347. <A href="manuscripts/ecol-89-07-21_331_347.pdf">pdf</A></P>
</td></tr><tr><td width=250>
<img src="images/FEM08_allometries.thumbnail.jpg" width="250" >
</td><td>
<P>Dietze, M., M. Wolosin, J. Clark. 2008. Tree allometries: capturing diversity using a Hierarchical Bayes approach. Forest Ecology and Management 256:1939-1948. <A href="manuscripts/FEM08_allometries.pdf"><I>pdf</I></A> <A href="manuscripts/FEM08_allom_appendix.doc">appendix</A></P>
</td></tr><tr><td width=250>
<img src="images/ibanezetal2008.thumbnail.jpg" width="250" >
</td><td>
<P>Ibáñez, I., Clark, J.S. and Dietze, M. 2008. Evaluating the sources of potential migrant species. Implications under climate change. Ecological Applications 18(7): 1664-1678. <A href="manuscripts/ibanezetal2008ecolapl.pdf">pdf</A></P>
</td></tr><tr><td width=250>
<img src="images/ClarkEcolLet07.thumbnail.jpg" width="250" >
</td><td>
<P>Clark, J., M. Dietze, S. Chakraborty, P. Agarwal, I. Ibáñez, S. LaDeau, M. Wolosin. 2007. Resolving the biodiversity paradox. <I>Ecology Letters 10(8): 647-659</I> <A href="manuscripts/ClarkEcolLet07.pdf">pdf</A></P>
</td></tr><tr><td width=250>
<img src="images/ClarkEcolAppl07.thumbnail.jpg" width="250" >
</td><td>
<P>Clark, J.S., M. Wolosin, M. Dietze, I. Ibáñez, S. LaDeau, M. Welsh, and B. Kloeppel. 2007. Tree growth inference and prediction from diameter censuses and ring widths. <I>Ecological Applications. 17(7): 1942-1953.</I> <A href="manuscripts/ClarkEcolAppl07.pdf">pdf</A></P>
</td></tr><tr><td width=250>
<img src="images/Govindarajan07.thumbnail.jpg" width="250" >
</td><td>
<P>Govindarajan, S., M. Dietze, P. Agarwal, and J.S. Clark. 2007. A scalable algorithm for dispersing populations. <I>Journal of Intelligent Information Systems. 29(1):39-61<A href="manuscripts/Govindarajan07.pdf">pdf</A></I></P>
</td></tr><tr><td width=250>
<img src="images/IbanezEcol06.thumbnail.jpg" width="250" >
</td><td>
<P>Ibáñez, I., J. S. Clark, M. C. Dietze, K. Feeley, M. Hersh, S. LaDeau, A. McBride, N. E. Welch, and M. S. Wolosin. 2006. Predicting biodiversity change: Outside the
climate envelope, beyond the species-area curve. <I>Ecology 87(8):1896-1906.</I> <A href="manuscripts/IbanezEcol06.pdf">pdf</A></P>
</td></tr><tr><td width=250>
<img src="images/modelforest.gif" width="250" >
</td><td>
<P>Govindarajan, S., M. Dietze, P. Agarwal, and J.S. Clark. 2004. A scalable model of forest dynamics. <I>Proceedings of the ACM Symposium on Computational Geometry, 106-115.</I> <A href="manuscripts/govindarajan04.pdf">pdf</A></P>
</td></tr><tr><td width=250>
<img src="images/ClarkEcology04.thumbnail.jpg" width="250" >
</td><td>
<P>Clark, J.S., Dietze M, Ibáñez I, Mohan J. 2003. Coexistence: how to identify trophic tradeoffs. <I>Ecology,84:17-31. </I> <A href="manuscripts/ClarkEcology04.pdf">pdf</A></P>
</td>
</tr>
</table>
<h2>Dissertations</h2>
<table>
<tr><td>Shiklomanov, Alexey. 2018. Improving ecological forecasts using model and data constraints <a href="https://hdl.handle.net/2144/32714">link</a></td></tr>
<tr><td>Mantooth, Joshua. 2017. Tree radial growth and carbohydrate storage in eastern U.S. temperate forests <a href="https://hdl.handle.net/2144/27385">link</a></td></tr>
<tr><td>Feng, Xiaohui. 2014. Productivity, physiology, community dynamics, and ecological impacts of a grassland agro-ecosystem: integrating field studies and ecosystem modeling <a href="https://hdl.handle.net/2144/27385">link</a></td></tr>
<tr><td>Davidson, Carl. 2012. The modeled effects of fire on carbon balance and vegetation abundance in Alaskan tundra <a href="http://hdl.handle.net/2142/34234">link</a></td></tr>
</table>
<h2>Data Publications</h2>
<table>
<tr><td width=250>
</td><td>
<p>NACP Site: Terrestrial Biosphere Model Output Data in Original Format
Ricciuto, D.M., K. Schaefer, P.E. Thornton, R.B. Cook, R. Anderson, M.A. Arain, I. Baker, J.M. Chen, M. Dietze, R. Grant, C. Izaurralde, A.K. Jain, A.W. King, C. Kucharik, S. Liu, E. Lokupitiya, Y. Luo, C. Peng, B. Poulter, D. Price, W. Riley, A. Sahoo, H. Tian, C. Tonitto, and H. Verbeeck. 2013. NACP Site: Terrestrial Biosphere Model Output Data in Original Format. Data set. Available on-line [http://daac.ornl.gov] from Oak Ridge National Laboratory Distributed Active Archive Center, Oak Ridge, Tennessee, USA. http://dx.doi.org/10.3334/ORNLDAAC/1192</p>
</td></tr>
</table>
<h2>Backlog (unpublished)</h2>
<table>
<tr><td width=250>
</td><td>
<p>Davidson et al. Parameterization and Validation of the Ecosystem Demography Model for Alaskan Tundra through Model-Data Feedbacks and Iterative Data Assimilation<i>in review</i></p>
</td></tr>
<tr><td width=250>
<img src="images/Light.thumbnail.jpg" width="250" >
</td><td>
<P>Dietze, M., S. Govindarajan, S. Chakraborthy, J. Clark, and P. Agarwal. Are canopy gaps always bright: spatiotemporal variability in light limits the gap recruitment window. <I>In prep.</I> </P>
</td></tr><tr><td width=250>
<img src="images/Saplings.thumbnail.jpg" width="250" >
</td><td>
<P>Dietze, M. and J. Clark. The role of individual variability in the response of saplings to large forest gaps. <I>In prep.</I></P>
</td></tr><tr><td width=250>
</td><td>
<P>Govindarajan, S., S. Chakraborty, P. Agarwal, M. Dietze, J. S. Clark, and M. Wolosin. Light competition in forest canopies. <I>In prep</I></P>
</td></tr><tr><td width=250>
</td><td>
<p>McMahon, S., J.S. Clark, H. Yu, M. Dietze, P. Agarwal. Forest biodiversity is not maintained by the immigration-extinction balance <i>In review</i></p>
</td></tr><tr><td width=250>
</td><td>
<P>Wolosin, M, J. Clark, M. Dietze, S.Chakraborty, P. Agarwal, H. Schultz, M. Welsh. Light competition in large trees: how to estimate it and its importance. Ecology <I>In prep</I></P>
</td></tr><tr><td width=250>
</td><td>
<P>Wolosin, M., P. Agarwal, S.Chakraborty, J.S. Clark, M.C. Dietze. Calibration with "ground truth" or data/model assimilation? Application to canopy light availability. <I>In prep</I>.</P>
</td></tr><tr><td width=250>
</td><td>
<P>Wolosin, M., P. Agarwal, J.S. Clark, M.C. Dietze, D. Winslow. Modeling exposed canopy area in mixed forests. <I>In prep</I></P>
</td></tr><tr><td width=250>
</td><td>
<P>Wolosin, M., P. Agarwal, J.S. Clark, M.C. Dietze, D. Winslow. Space-filling crowns in forest models: tree movement with fast algorithms. <I>In prep</I></P>
</td>
</tr>
</table>
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