Create a card that lists all diseases related to the one being reviewed, and add to the overview display for a disease

[jmcmurry]

From one disease see a preview of other diseases, whether they share:

• phenotypes
• causal gene
• pathway

[jmcmurry]

We discussed with @kshefchek today that this would be feasible to tackle; however it would be best if there were a cleaner API call to make.

1. Kent to create some manual JSON (example being Marfan and Loyes-Dietz and similar)
2. Kent to adjust the API
3. In parallel with 2, Vince will create the component. This does not need to be embeddable.

[kshefchek]

there was an outstanding question on whether to include implicit phenotypes in these counts @cmungall @pnrobinson your thoughts on this?

[pnrobinson]

Implicit phenotypes should (nearly) always be counted by algorithms. Whether or not to show all of them in a UI is another question that "depends". Could you describe the use case?

[kshefchek]

it would just be for showing these counts in the mock up above, perhaps also some hover over that shows the phenotypes (@jmcmurry ?) I like the idea of counting implicit phenotypes as we already support this via jaccard sim. I was more worried people might see a large phenotype intersection count and click on the page and see a much smaller number and be confused.

[pnrobinson]

I mean that you may not want to show new nodes with implicit counts. I am not sure I understand the logic of the mockup, and it is not trivial to fine the best list of shared phenotypes for a larger list of diseases, that sounds like one of those nasty graph problems :-0.

[kshefchek]

is this not just ranking jaccard sim scores? I may be under-thinking the problem

[pnrobinson]

or me. We have probably reached the limits of what can easily be discussed on issues, let's discuss at a huddle or zoom!