diff --git a/example_files/GM12878_chr1.sam b/example_files/GM12878_chr1.sam
index 1f9bf06..871ba39 100644
--- a/example_files/GM12878_chr1.sam
+++ b/example_files/GM12878_chr1.sam
@@ -1,3 +1,201 @@
+@HD	VN:1.4
+@SQ	SN:chr1	LN:248956422
+@SQ	SN:chr2	LN:242193529
+@SQ	SN:chr3	LN:198295559
+@SQ	SN:chr4	LN:190214555
+@SQ	SN:chr5	LN:181538259
+@SQ	SN:chr6	LN:170805979
+@SQ	SN:chr7	LN:159345973
+@SQ	SN:chr8	LN:145138636
+@SQ	SN:chr9	LN:138394717
+@SQ	SN:chr10	LN:133797422
+@SQ	SN:chr11	LN:135086622
+@SQ	SN:chr12	LN:133275309
+@SQ	SN:chr13	LN:114364328
+@SQ	SN:chr14	LN:107043718
+@SQ	SN:chr15	LN:101991189
+@SQ	SN:chr16	LN:90338345
+@SQ	SN:chr17	LN:83257441
+@SQ	SN:chr18	LN:80373285
+@SQ	SN:chr19	LN:58617616
+@SQ	SN:chr20	LN:64444167
+@SQ	SN:chr21	LN:46709983
+@SQ	SN:chr22	LN:50818468
+@SQ	SN:chrX	LN:156040895
+@SQ	SN:chrY	LN:57227415
+@SQ	SN:chrM	LN:16569
+@SQ	SN:chr1_KI270706v1_random	LN:175055
+@SQ	SN:chr1_KI270707v1_random	LN:32032
+@SQ	SN:chr1_KI270708v1_random	LN:127682
+@SQ	SN:chr1_KI270709v1_random	LN:66860
+@SQ	SN:chr1_KI270710v1_random	LN:40176
+@SQ	SN:chr1_KI270711v1_random	LN:42210
+@SQ	SN:chr1_KI270712v1_random	LN:176043
+@SQ	SN:chr1_KI270713v1_random	LN:40745
+@SQ	SN:chr1_KI270714v1_random	LN:41717
+@SQ	SN:chr2_KI270715v1_random	LN:161471
+@SQ	SN:chr2_KI270716v1_random	LN:153799
+@SQ	SN:chr3_GL000221v1_random	LN:155397
+@SQ	SN:chr4_GL000008v2_random	LN:209709
+@SQ	SN:chr5_GL000208v1_random	LN:92689
+@SQ	SN:chr9_KI270717v1_random	LN:40062
+@SQ	SN:chr9_KI270718v1_random	LN:38054
+@SQ	SN:chr9_KI270719v1_random	LN:176845
+@SQ	SN:chr9_KI270720v1_random	LN:39050
+@SQ	SN:chr11_KI270721v1_random	LN:100316
+@SQ	SN:chr14_GL000009v2_random	LN:201709
+@SQ	SN:chr14_GL000225v1_random	LN:211173
+@SQ	SN:chr14_KI270722v1_random	LN:194050
+@SQ	SN:chr14_GL000194v1_random	LN:191469
+@SQ	SN:chr14_KI270723v1_random	LN:38115
+@SQ	SN:chr14_KI270724v1_random	LN:39555
+@SQ	SN:chr14_KI270725v1_random	LN:172810
+@SQ	SN:chr14_KI270726v1_random	LN:43739
+@SQ	SN:chr15_KI270727v1_random	LN:448248
+@SQ	SN:chr16_KI270728v1_random	LN:1872759
+@SQ	SN:chr17_GL000205v2_random	LN:185591
+@SQ	SN:chr17_KI270729v1_random	LN:280839
+@SQ	SN:chr17_KI270730v1_random	LN:112551
+@SQ	SN:chr22_KI270731v1_random	LN:150754
+@SQ	SN:chr22_KI270732v1_random	LN:41543
+@SQ	SN:chr22_KI270733v1_random	LN:179772
+@SQ	SN:chr22_KI270734v1_random	LN:165050
+@SQ	SN:chr22_KI270735v1_random	LN:42811
+@SQ	SN:chr22_KI270736v1_random	LN:181920
+@SQ	SN:chr22_KI270737v1_random	LN:103838
+@SQ	SN:chr22_KI270738v1_random	LN:99375
+@SQ	SN:chr22_KI270739v1_random	LN:73985
+@SQ	SN:chrY_KI270740v1_random	LN:37240
+@SQ	SN:chrUn_KI270302v1	LN:2274
+@SQ	SN:chrUn_KI270304v1	LN:2165
+@SQ	SN:chrUn_KI270303v1	LN:1942
+@SQ	SN:chrUn_KI270305v1	LN:1472
+@SQ	SN:chrUn_KI270322v1	LN:21476
+@SQ	SN:chrUn_KI270320v1	LN:4416
+@SQ	SN:chrUn_KI270310v1	LN:1201
+@SQ	SN:chrUn_KI270316v1	LN:1444
+@SQ	SN:chrUn_KI270315v1	LN:2276
+@SQ	SN:chrUn_KI270312v1	LN:998
+@SQ	SN:chrUn_KI270311v1	LN:12399
+@SQ	SN:chrUn_KI270317v1	LN:37690
+@SQ	SN:chrUn_KI270412v1	LN:1179
+@SQ	SN:chrUn_KI270411v1	LN:2646
+@SQ	SN:chrUn_KI270414v1	LN:2489
+@SQ	SN:chrUn_KI270419v1	LN:1029
+@SQ	SN:chrUn_KI270418v1	LN:2145
+@SQ	SN:chrUn_KI270420v1	LN:2321
+@SQ	SN:chrUn_KI270424v1	LN:2140
+@SQ	SN:chrUn_KI270417v1	LN:2043
+@SQ	SN:chrUn_KI270422v1	LN:1445
+@SQ	SN:chrUn_KI270423v1	LN:981
+@SQ	SN:chrUn_KI270425v1	LN:1884
+@SQ	SN:chrUn_KI270429v1	LN:1361
+@SQ	SN:chrUn_KI270442v1	LN:392061
+@SQ	SN:chrUn_KI270466v1	LN:1233
+@SQ	SN:chrUn_KI270465v1	LN:1774
+@SQ	SN:chrUn_KI270467v1	LN:3920
+@SQ	SN:chrUn_KI270435v1	LN:92983
+@SQ	SN:chrUn_KI270438v1	LN:112505
+@SQ	SN:chrUn_KI270468v1	LN:4055
+@SQ	SN:chrUn_KI270510v1	LN:2415
+@SQ	SN:chrUn_KI270509v1	LN:2318
+@SQ	SN:chrUn_KI270518v1	LN:2186
+@SQ	SN:chrUn_KI270508v1	LN:1951
+@SQ	SN:chrUn_KI270516v1	LN:1300
+@SQ	SN:chrUn_KI270512v1	LN:22689
+@SQ	SN:chrUn_KI270519v1	LN:138126
+@SQ	SN:chrUn_KI270522v1	LN:5674
+@SQ	SN:chrUn_KI270511v1	LN:8127
+@SQ	SN:chrUn_KI270515v1	LN:6361
+@SQ	SN:chrUn_KI270507v1	LN:5353
+@SQ	SN:chrUn_KI270517v1	LN:3253
+@SQ	SN:chrUn_KI270529v1	LN:1899
+@SQ	SN:chrUn_KI270528v1	LN:2983
+@SQ	SN:chrUn_KI270530v1	LN:2168
+@SQ	SN:chrUn_KI270539v1	LN:993
+@SQ	SN:chrUn_KI270538v1	LN:91309
+@SQ	SN:chrUn_KI270544v1	LN:1202
+@SQ	SN:chrUn_KI270548v1	LN:1599
+@SQ	SN:chrUn_KI270583v1	LN:1400
+@SQ	SN:chrUn_KI270587v1	LN:2969
+@SQ	SN:chrUn_KI270580v1	LN:1553
+@SQ	SN:chrUn_KI270581v1	LN:7046
+@SQ	SN:chrUn_KI270579v1	LN:31033
+@SQ	SN:chrUn_KI270589v1	LN:44474
+@SQ	SN:chrUn_KI270590v1	LN:4685
+@SQ	SN:chrUn_KI270584v1	LN:4513
+@SQ	SN:chrUn_KI270582v1	LN:6504
+@SQ	SN:chrUn_KI270588v1	LN:6158
+@SQ	SN:chrUn_KI270593v1	LN:3041
+@SQ	SN:chrUn_KI270591v1	LN:5796
+@SQ	SN:chrUn_KI270330v1	LN:1652
+@SQ	SN:chrUn_KI270329v1	LN:1040
+@SQ	SN:chrUn_KI270334v1	LN:1368
+@SQ	SN:chrUn_KI270333v1	LN:2699
+@SQ	SN:chrUn_KI270335v1	LN:1048
+@SQ	SN:chrUn_KI270338v1	LN:1428
+@SQ	SN:chrUn_KI270340v1	LN:1428
+@SQ	SN:chrUn_KI270336v1	LN:1026
+@SQ	SN:chrUn_KI270337v1	LN:1121
+@SQ	SN:chrUn_KI270363v1	LN:1803
+@SQ	SN:chrUn_KI270364v1	LN:2855
+@SQ	SN:chrUn_KI270362v1	LN:3530
+@SQ	SN:chrUn_KI270366v1	LN:8320
+@SQ	SN:chrUn_KI270378v1	LN:1048
+@SQ	SN:chrUn_KI270379v1	LN:1045
+@SQ	SN:chrUn_KI270389v1	LN:1298
+@SQ	SN:chrUn_KI270390v1	LN:2387
+@SQ	SN:chrUn_KI270387v1	LN:1537
+@SQ	SN:chrUn_KI270395v1	LN:1143
+@SQ	SN:chrUn_KI270396v1	LN:1880
+@SQ	SN:chrUn_KI270388v1	LN:1216
+@SQ	SN:chrUn_KI270394v1	LN:970
+@SQ	SN:chrUn_KI270386v1	LN:1788
+@SQ	SN:chrUn_KI270391v1	LN:1484
+@SQ	SN:chrUn_KI270383v1	LN:1750
+@SQ	SN:chrUn_KI270393v1	LN:1308
+@SQ	SN:chrUn_KI270384v1	LN:1658
+@SQ	SN:chrUn_KI270392v1	LN:971
+@SQ	SN:chrUn_KI270381v1	LN:1930
+@SQ	SN:chrUn_KI270385v1	LN:990
+@SQ	SN:chrUn_KI270382v1	LN:4215
+@SQ	SN:chrUn_KI270376v1	LN:1136
+@SQ	SN:chrUn_KI270374v1	LN:2656
+@SQ	SN:chrUn_KI270372v1	LN:1650
+@SQ	SN:chrUn_KI270373v1	LN:1451
+@SQ	SN:chrUn_KI270375v1	LN:2378
+@SQ	SN:chrUn_KI270371v1	LN:2805
+@SQ	SN:chrUn_KI270448v1	LN:7992
+@SQ	SN:chrUn_KI270521v1	LN:7642
+@SQ	SN:chrUn_GL000195v1	LN:182896
+@SQ	SN:chrUn_GL000219v1	LN:179198
+@SQ	SN:chrUn_GL000220v1	LN:161802
+@SQ	SN:chrUn_GL000224v1	LN:179693
+@SQ	SN:chrUn_KI270741v1	LN:157432
+@SQ	SN:chrUn_GL000226v1	LN:15008
+@SQ	SN:chrUn_GL000213v1	LN:164239
+@SQ	SN:chrUn_KI270743v1	LN:210658
+@SQ	SN:chrUn_KI270744v1	LN:168472
+@SQ	SN:chrUn_KI270745v1	LN:41891
+@SQ	SN:chrUn_KI270746v1	LN:66486
+@SQ	SN:chrUn_KI270747v1	LN:198735
+@SQ	SN:chrUn_KI270748v1	LN:93321
+@SQ	SN:chrUn_KI270749v1	LN:158759
+@SQ	SN:chrUn_KI270750v1	LN:148850
+@SQ	SN:chrUn_KI270751v1	LN:150742
+@SQ	SN:chrUn_KI270752v1	LN:27745
+@SQ	SN:chrUn_KI270753v1	LN:62944
+@SQ	SN:chrUn_KI270754v1	LN:40191
+@SQ	SN:chrUn_KI270755v1	LN:36723
+@SQ	SN:chrUn_KI270756v1	LN:79590
+@SQ	SN:chrUn_KI270757v1	LN:71251
+@SQ	SN:chrUn_GL000214v1	LN:137718
+@SQ	SN:chrUn_KI270742v1	LN:186739
+@SQ	SN:chrUn_GL000216v2	LN:176608
+@SQ	SN:chrUn_GL000218v1	LN:161147
+@SQ	SN:chrEBV	LN:171823
+@PG	ID:STAR	PN:STAR	VN:STAR_2.5.2a	CL:STARlong   --runThreadN 4   --genomeDir /bio/dwyman/pacbio_f2016/data/STAR_hg38_ENCODE   --readFilesIn /bio/dwyman/pacbio_f2016/GM12878/rep3/pbtCluster/pbtCluster_out/PB14/all_quivered_hq.100_30_0.99.fasta      --readNameSeparator space      --outFileNamePrefix /bio/dwyman/pacbio_f2016/GM12878/rep3/STAR/STAR_out/PB14/   --outSAMtype SAM      --outSAMattributes NH   HI   NM   MD   jM   jI      --outFilterMultimapScoreRange 1   --outFilterMismatchNmax 2000   --scoreGapNoncan -20   --scoreGapGCAG -4   --scoreGapATAC -8   --scoreDelBase -1   --scoreDelOpen -1   --scoreInsOpen -1   --scoreInsBase -1   --seedSearchStartLmax 50   --seedPerReadNmax 100000   --seedPerWindowNmax 1000   --alignTranscriptsPerReadNmax 100000   --alignTranscriptsPerWindowNmax 10000   --alignEndsType Local   --sjdbGTFfile /bio/dwyman/pacbio_f2016/data/GENCODEv24/gencode.v24.annotation.gtf
+@CO	user command line: STARlong --runThreadN 4 --genomeDir /bio/dwyman/pacbio_f2016/data/STAR_hg38_ENCODE --readFilesIn /bio/dwyman/pacbio_f2016/GM12878/rep3/pbtCluster/pbtCluster_out/PB14/all_quivered_hq.100_30_0.99.fasta --sjdbGTFfile /bio/dwyman/pacbio_f2016/data/GENCODEv24/gencode.v24.annotation.gtf --outFileNamePrefix /bio/dwyman/pacbio_f2016/GM12878/rep3/STAR/STAR_out/PB14/ --outSAMattributes NH HI NM MD jM jI --readNameSeparator space --outFilterMultimapScoreRange 1 --outFilterMismatchNmax 2000 --scoreGapNoncan -20 --scoreGapGCAG -4 --scoreGapATAC -8 --scoreDelOpen -1 --scoreDelBase -1 --scoreInsOpen -1 --scoreInsBase -1 --alignEndsType Local --seedSearchStartLmax 50 --seedPerReadNmax 100000 --seedPerWindowNmax 1000 --alignTranscriptsPerReadNmax 100000 --alignTranscriptsPerWindowNmax 10000 --outSAMtype SAM
 c33255/f1p0/3238	0	chr1	827670	255	7S106M1227N102M18549N153M1677N119M2324N184M560N96M624N34M49N898M1D66M1D556M1D125M1327N240M1D479M1D73M	*	0	0	TTTCTGGCCTGCCAGTGTCTCCGCCGGTTGAAAGCGCGTGTCTGCGTCGGGTTCTGTTGGAGTGCGTTCGGTGCGCCGTGGGTCCGCGCTGCTTCCACCCAACTTCCTGTTAGTTTCTCTCCTGTCACAATGGCATGATCTCGGCTCACTGCGACCTCTGCTTCCTGGGTTCAAGGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGTTTCCATCATTATCTTCTATGGAGTTCTTCATTCCCACATCTGTGGACCTTAAAATCCTACCGTTGAGTGCCTGCCTTGGATCAGCAGTCAGTTCGTTACCTTGGTTCTCAGACGATGCTTGCAACAACGCCATGCGATTCGCCCACTCTTGGAGAAAATAAGAGAAGTATCCCTGAAGGATGAAATATCCTCGAATATGAAAAGGTCTGCTCTCTGAAGACCAACTGTCTCAGTCTGCTTTTTGCTGCTGTAACAGAATACCACAGACTTGGTTACATTAGTTATACACTCTGGAGGTGACTTGACCTGTCATTGTGAACAATTATTGCTCTTGGACGACCCAGGACATAGGCCAGCCAGTACTTACCCCAGTGTGTTGGAGAATCGCGCTTGGCTTCTTCCTCTGTGCTGAGTCATGAAAGTTGCCGGAGCAGGTGCAGTTACACAACCTCCAGGTATGATCCTGTTTAAGGACTGGATTTAGGATAACTACTTAGAGGTTAAAAGTCACAAGGGTGTATGGATGAGGCTGGAGTGATCTGGGACCAAAGACATCTAGGCTTGCTGTCAAGGCTTCTGATCAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCCGACGCTGATCAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCTGACCCTGATCAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCCGACCCTGATGAACGTGAGATGACCGCCGTGTGGTAAACTGATGAACCCCGACCCTCATGAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCCGACCCTGATCAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCCGACCCTGATGAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCCGACCCTGATCAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCCGACCCTGATCAACATGAGATGACCGCCGTGTGGTAAACTGATGAACCCTGACCCATTAGGCTTTGGCTACAGAATGTGGAAATAAGTTGTGTTACTACATGTGTGTAATCCTAGGGTGCAGGACACCGGCCGGGAGGTTCCATAGAGTGATGGGTTCTGCAGGTAACTCATCCTCTAGTCCTCTGTAAGCTCCTAGAAGGAAGAAATTATGTCCTTTAGACTAATAAAATTCCTCCAAACCAAATACAGCACCTACTGTGAAGACACAAAGATACTTTTAGAATAGTAAAAACTTTATCCATTGAGAAATTCCTTAATGAAACAGTATCCAAGAAGTCATTTGCCAGCAGATTTCTTAGAGGTGCGATAAAGAAGAGGACATTGCCAGTCGTCACAGCAGCTGCAATAGCTCCTCTCTATTGTTAAACAGTGGGATATCTTGTGCAGGTTTTCAGTTGACAATCAATTTTAAAGATTAGTTTCGGTCCCCATCAATCAATTATTTATTAACCCATCAATAAAATTTAAATGCTCTGTGAGGTACAATAGCTATTAAAAGAGACAGAGGCACTTTCTGTGTCCAGAGGGCTTTTAGTCTGCTCTGGAAAGCAAGATGCGTGCAGATGAGTGACGCAGTGCATCGTGTGGATGCAAAGGGAGGGACTCACATGGGAACCAGAGGAGCTACGAAGGGAGGCAGTGGGGACTGGTGGGTCGAGACCTGGAAATAACACATGAATAGGCAACAAAGGTTTCCTTTCCTCTTCCATGCACTTCAGTCCTTGAAAAACGTCTTACCACGGAATTCCACAGCGTACCAAGCGATTCCACAGCTTGATGGCACACTCTCCTTTCTCAGCATTCTTGAAAATGGCGTGTGAGCCAAGCCATCTTACTGAGAAATTACCTTAAACCATTTGATGAACCAAAAATATTTTGTAATACCCATCTCCGACATTAGGTAGGCAAATCACACAGAAACACCGAGGTCTTCTGAGTCATATTTATCTGAAAAATCACAGCTTGGGTGCATGTGAAGCCAGAGGAGCACTCCTGGGGCCTGCGGTGCCATCACTCAGCTCCCCTGGGCTTCACATGGCCATGGAGCACCCAGCAAGTGTAGGCTCTGAGCCTTCAGGGAGGGCGGCATCAGCCAGCACCATCGTCTCCTGGGTCTTGTGCCTCTTCCTTGGTTGCGGTGTTGTCAGGGCCAGAATTGGGCAATTCCGGGTGACATCCAGGTGTGGCTGCTGACACGGAGCACAGGACACCCTGCTCCTGTGGTTTGCAGCCCCGGCCTTCTCTTCGAGGACGCCTCTGCTCTTCTGCCTCACACTCGGATTGGACCTTCTTCAGCACAGCCAGTGGCCGAGGCTTCCTCCCTGGGGCTCAGTGGAGCAGGACAGATGCTGCATCCAAACTCTTCCATTGGGTTCCAGTCTGTTCCAGTCATGCCCTTGAGCCTCTAAAGCTCCTAGGTGAGAGACGTAGCAGCTGACAGCACTTCCACTTGATTTGGGTGGACTCCAGCCTCCCCAGCAACAATAAGAGATCAAAAGCATCGTTGAGGAAGCAGCTTGCTGAAACGCTGAGTGCCCGCCACTCTCAGGTCAGGTGGGACCGGCAGGCCAGCATGAGTTCCTGAACACTTGGTTCTCAATACTGGCCACAGCCACACTGTAAGGGGAAACAAGAGGGCGCTGTATGCAAACATCTCTTGAACTCTGGAGTCTGCTCACCTTCCTGCCTCAAGCCCCTCTCCCACGTGGTCCAGTCACCATTCTCCACAGAGACTACCCTAAAACCCAGCGACTCTCGTGTGCCTGCAGAATGGCACAGCCCGTTCTCATAGCAGCACTCCTGTTTAATCAGAGGGATGTTAACGACCAAGTCATATTTGCTCGATTTGTGTTCAATATATTTCATTTGTACCGATAAAACTTAAAAATATCCCCACACATGCATTGCCTATTAAAGAGTATCTTCAGGTACACCTCCCTTACACATCAGTTAACTTGATAATTTCTTCCCATTCTTGTGCAATAAATTTCCTTCCTG	*	NH:i:1	HI:i:1	NM:i:19	MD:Z:572G27C232C5G3G34C9G3G90G6G48G156T495^A66^G556^G365^C193A216C68^C73	jM:B:c,21,21,21,21,21,21,5,1	jI:B:i,827776,829002,829105,847653,847807,849483,849603,851926,852111,852670,852767,853390,853425,853473,855122,856448
 c1417/f31p12/2759	16	chr1	944206	255	595M256N90M371N136M519N114M115N144M1585N102M257N114M2523N112M761N140M272N189M574N114M493N111M111N79M1840N91M81N121M678N132M73N175M1655N153M133N47M	*	0	0	ACACAATGGCCCTGCCTCCCACCGCTTTATTTCTTTCGGTTTCGGATGCAAAACAAAAAATTTTAAAAGAAAATGTGACTTCAAAGGAAAAGAACAAATTTCCAAAGACTTGGGGGAGTGAAGGCAGAGCCTGGTGCAGATGGACGAGGTCTGCAGACGGAGGGCAGAGGTGGTGGAAGGGGCCAGGGGCCTGCAGGCCTCCCCCTGGAACTGGGACTGGTCTCGGTCTGCTGACGTCAGGGTCAGCTCCCCCGCGGAGCTGACTTCAGCAGCCCACAGCTGTGGGGCTTCAGCAGCCACACCAGCCCAGCCCAGCCCAGCTCTCGATACGTTTGGTCTTTCATGCTGAAAAATAAATAATAAAGCCTGTCCCGTGTCTACTGCCTCCCCCAACTGCACAGACGCCAGCCTCTAGGCCTGACTGCCAGGGAGGTGGAAACACTGGCCACCAGCCCGGCAGCCCCTACAGGCCCCCCAGATGGGCTGCCTCAGTCGTCCTCTGAGAGCTGCAGATCCTCCAGCTCGTCCTCCGGCCCCTGGGCCAGCTGCTGCAGCTCCCCAGGGGCCAGCCCCGCCTCTGCGTCTGGGTCTCCATCCTCCGAGTTGCTGCTGTCCTCCTCGCCCTCCTCCTCGTCCTCTTCATCGTCTTCCACCCCATGCCGAGTGCTCAGGGGCCTCAGTATCCCTCTCTCCGAGAATCCCTCGGTGTCGTCCTCTTCAGAGCTGTTCAGGTCAAAGAGGTCTTTAAATTGCTTCCTGTCCTCATCCTTCCTGTCAGCCATCTTCCTTCGTTTGATCTCAGGGAAGTTCAGGTCTTCCAGCCGCTCTTTGCCACTGATCTCCAGCTGGATCTCCCGGTCACGCAGCTTGCGCCAGTGGCTGTAGTACAAGGTCAAGGGTGTCCCCTCTTCCCGGGTCAGCTTCTCCCAGGCTTCCACTGCCTGCTGCTCAGAGACGCCGAAGGAAACCCTCTGGCGGCGGCTGCAGATGTATGCCGAGTTCTCCTGAACCTTCCCAAGCAGCTGCTGCACCTGCCGGCAGTAGTTGGCCACCTTGCACTCCCGGAGGAACGACTTCAGCTGCAGGACCACAGGCAGCACCAGCTCCGGGAAGCCGATGCAGTGTGCCTGGCTGTGCAGGTACTCCAGGGTGAGGTCGTACAGCTGCTCCACCAGGCCGTCCCGGTACGCCTTCTCCTGCAGGTTGACATGGGACAGCTTCAGGATCACGGAGAAGTTGATGGGCTTGGAGCTCATGCGCCCTGGCTTCCTGTTGAAGTCGACCTGCTGGAACATCTCCAGGATGAAAGGCAGCACCGGGATGAAGGCCCCCGAGCTCCCCGAGAGCAGCGTCAGGGCACGGATGCAGTGCATTCGCAGCGGGTAGAAGCGGGCAGTGGGGATGAGCTTGATACAGCCAATGATGACTTGGGCAAGGGGGTAGACCAAGGGCTGGAGGGCTTCGCTGGGGCCCGCAGTGCTCAGGACCCGGCACCACAGGAAGAGGCAGTGCACATACTGCCAGTTGTACACAGACTGGTATGTTTCCTTCTTGCGGGTGGTCATGGCGTTGCGCAGGTGTATGGCGAGCTGGCGGATGTAGAGGAAGGCGTGCTGGTAGGCCACACCCGGCTCCAGGGCCAGCAGCTCCGTCAAGGTCCACTGCATGAAACTGATGAAGGGGAGGGCACCAGGCGAGGTGAACTTGCAGTTCCTCACATACGTGATGTACATTTGCTTGAGGACGGGGCCAAGGAAAGTGTCCTTCTTGTGCCGGCAGACTCTGCTGAGGACCAGGAAAGCCAGCACCCGCAGAGACTCCTCCCCAGTGCTCCATACGACCACCATTCTCTTGAGCAGCATGCGGCACTGCTTGGGGAAGGTCAGGAAGCAGGGCACCAGCACGCTGATGTGCCGCAGCACGGCCGCCAACACCGTCGTCTCCGACAGACAGGACACCAGCTGTATGGCCGAGCCCAGGTAAGCCTTGATGTCCACACGAAGCTTCCCCCAGAGCGGGCTGCTGGACGGCTGCAGCATCCTGCTGCTATCCTTTGCCACCTTTCCAAACAGCAGCTTCTGGAGACAGCCAATGAGGTCTCTGATGCAGAAGGTAACCAGAGCATTGAATGCAGCACTGTCCGTGACCTGGAATTTGTTGGCCTCAGCACTTTCCTGGTCCCCTCGGGTGGTGGCCACAGCTGCTCGGAACGCCTGTACCACTTCATGGAACAGCTTTGGAGTGAGGCGTTGCTTTGCTGCCTGCTTCCATCTCTCAACCATGGCGACGGTCACAGGAACAGAATTCTTCTTCCCCTTCAGCCCTCTGGGGACTCTGTCCCCATCTTCTCCTTCCTCCGCTCCATCCTCCTCCTCACTGGCTTCCTCCAGCACATCTGGCAGGGAGTGGAACGGCCCCTCTTCCTCCTCAGAGCTGTCCGAGTCGCTGAAGTTTAGCAGGCTCTGGTCATTCTCCTGCAGGAACTTGTAGAACTCGGGGTCTCTGTCCTTCAGCCGAGAGAGCTGGTCTTTGTGCTCAGAGGCACGGCCTTTACGCCGGCTGGCCGAGGGGCTCCCGCCCGGCTTATCCGGACTCCGGGCAGCCTCGCGTGCTTCCCGTGTCTCCGCTTGTGGAGAATTTTCGGACTCGGATTCGGACTCGGAGTCAAAGCCCGAAGCTAGGAACTCGTCCACCGTCAGCTCCGCCAGGCGCCTCTTGCGGCTCCCCGCAGCTGCCATGACACCAACCCGAAGCGTGCA	*	NH:i:1	HI:i:1	NM:i:7	MD:Z:90G10T793G314T345A263T19T918	jM:B:c,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22	jI:B:i,944801,945056,945147,945517,945654,946172,946287,946401,946546,948130,948233,948489,948604,951126,951239,951999,952140,952411,952601,953174,953289,953781,953893,954003,954083,955922,956014,956094,956216,956893,957026,957098,957274,958928,959082,959214
 c3620/f1p4/2788	16	chr1	944206	255	595M241N105M371N136M519N114M115N144M1585N102M257N114M2523N112M761N140M272N189M574N114M493N111M111N79M1840N91M81N121M678N132M73N175M1655N153M133N61M	*	0	0	ACACAATGGCCCTGCCTCCCACCGCTTTATTTCTTTCGGTTTCGGATGCAAAACAAAAAATTTTAAAAGAAAATGTGACTTCAAAGGAAAAGAACAAATTTCCAAAGACTTGGGGGAGTGAAGGCAGAGCCTGGTGCAGATGGACGAGGTCTGCAGACGGAGGGCAGAGGTGGTGGAAGGGGCCAGGGGCCTGCAGGCCTCCCCCTGGAACTGGGACTGGTCTCGGTCTGCTGACGTCAGGGTCAGCTCCCCCGCGGAGCTGACTTCAGCAGCCCACAGCTGTGGGGCTTCAGCAGCCACACCAGCCCAGCCCAGCCCAGCTCTCGATACGTTTGGTCTTTCATGCTGAAAAATAAATAATAAAGCCTGTCCCGTGTCTACTGCCTCCCCCAACTGCACAGACGCCAGCCTCTAGGCCTGACTGCCAGGGAGGTGGAAACACTGGCCACCAGCCCGGCAGCCCCTACAGGCCCCCCAGATGGGCTGCCTCAGTCGTCCTCTGAGAGCTGCAGATCCTCCAGCTCGTCCTCCGGCCCCTGGGCCAGCTGCTGCAGCTCCCCAGGGGCCAGCCCCGCCTCTGCGTCTGGGTCTCCATCCCAAGACCATTCACCCTCCGAGTTGCTGCTGTCCTCCTCGCCCTCCTCCTCGTCCTCTTCATCGTCTTCCACCCCATGCCGAGTGCTCAGGGGCCTCAGTATCCCTCTCTCCGAGAATCCCTCGGTGTCGTCCTCTTCAGAGCTGTTCAGGTCAAAGAGGTCTTTAAATTGCTTCCTGTCCTCATCCTTCCTGTCAGCCATCTTCCTTCGTTTGATCTCAGGGAAGTTCAGGTCTTCCAGCCGCTCTTTGCCACTGATCTCCAGCTGGATCTCCCGGTCACGCAGCTTGCGCCAGTGGCTGTAGTACAAGGTCAAGGGTGTCCCCTCTTCCCGGGTCAGCTTCTCCCAGGCTTCCACTGCCTGCTGCTCAGAGACGCCGAAGGAAACCCTCTGGCGGCGGCTGCAGATGTATGCCGAGTTCTCCTGAACCTTCCCAAGCAGCTGCTGCACCTGCCGGCAGTAGTTGGCCACCTTGCACTCCCGGAGGAACGACTTCAGCTGCAGGACCACAGGCAGCACCAGCTCCGGGAAGCCGATGCAGTGTGCCTGGCTGTGCAGGTACTCCAGGGTGAGGTCGTACAGCTGCTCCACCAGGCCGTCCCGGTACGCCTTCTCCTGCAGGTTGACATGGGACAGCTTCAGGATCACGGAGAAGTTGATGGGCTTGGAGCTCATGCGCCCTGGCTTCCTGTTGAAGTCGACCTGCTGGAACATCTCCAGGATGAAAGGCAGCACCGGGATGAAGGCCCCCGAGCTCCCCGAGAGCAGCGTCAGGGCACGGATGCAGTGCATTCGCAGCGGGTAGAAGCGGGCAGTGGGGATGAGCTTGATACAGCCAATGATGACTTGGGCAAGGGGGTAGACCAAGGGCTGGAGGGCTTCGCTGGGGCCCGCAGTGCTCAGGACCCGGCACCACAGGAAGAGGCAGTGCACATACTGCCAGTTGTACACAGACTGGTATGTTTCCTTCTTGCGGGTGGTCATGGCGTTGCGCAGGTGTATGGCGAGCTGGCGGATGTAGAGGAAGGCGTGCTGGTAGGCCACACCCGGCTCCAGGGCCAGCAGCTCCGTCAAGGTCCACTGCATGAAACTGATGAAGGGGAGGGCACCAGGCGAGGTGAACTTGCAGTTCCTCACATACGTGATGTACATTTGCTTGAGGACGGGGCCAAGGAAAGTGTCCTTCTTGTGCCGGCAGACTCTGCTGAGGACCAGGAAAGCCAGCACCCGCAGAGACTCCTCCCCAGTGCTCCATACGACCACCATTCTCTTGAGCAGCATGCGGCACTGCTTGGGGAAGGTCAGGAAGCAGGGCACCAGCACGCTGATGTGCCGCAGCACGGCCGCCAACACCGTCGTCTCCGACAGACAGGACACCAGCTGTATGGCCGAGCCCAGGTAAGCCTTGATGTCCACACGAAGCTTCCCCCAGAGCGGGCTGCTGGACGGCTGCAGCATCCTGCTGCTATCCTTTGCCACCTTTCCAAACAGCAGCTTCTGGAGACAGCCAATGAGGTCTCTGATGCAGAAGGTAACCAGAGCATTGAATGCAGCACTGTCCGTGACCTGGAATTTGTTGGCCTCAGCACTTTCCTGGTCCCCTCGGGTGGTGGCCACAGCTGCTCGGAACGCCTGTACCACTTCATGGAACAGCTTTGGAGTGAGGCGTTGCTTTGCTGCCTGCTTCCATCTCTCAACCATGGCGACGGTCACAGGAACAGAATTCTTCTTCCCCTTCAGCCCTCTGGGGACTCTGTCCCCATCTTCTCCTTCCTCCGCTCCATCCTCCTCCTCACTGGCTTCCTCCAGCACATCTGGCAGGGAGTGGAACGGCCCCTCTTCCTCCTCAGAGCTGTCCGAGTCGCTGAAGTTTAGCAGGCTCTGGTCATTCTCCTGCAGGAACTTGTAGAACTCGGGGTCTCTGTCCTTCAGCCGAGAGAGCTGGTCTTTGTGCTCAGAGGCACGGCCTTTACGCCGGCTGGCCGAGGGGCTCCCGCCCGGCTTATCCGGACTCCGGGCAGCCTCGCGTGCTTCCCGTGTCTCCGCTTGTGGAGAATTTTCGGACTCGGATTCGGACTCGGAGTCAAAGCCCGAAGCTAGGAACTCGTCCACCGTCAGCTCCGCCAGGCGCCTCTTGCGGCTCCCCGCAGCTGCCATGACACCAACCCGAAGCGTGCACCCCACTTCCGGCC	*	NH:i:1	HI:i:1	NM:i:7	MD:Z:90G10T808G314T345A263T19T932	jM:B:c,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22,22	jI:B:i,944801,945041,945147,945517,945654,946172,946287,946401,946546,948130,948233,948489,948604,951126,951239,951999,952140,952411,952601,953174,953289,953781,953893,954003,954083,955922,956014,956094,956216,956893,957026,957098,957274,958928,959082,959214