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DESCRIPTION
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Package: TENxGenomics
Title: Interface to 10x Genomics data
Version: 0.0.27
Authors@R:
c(person(
"Martin", "Morgan", email = "[email protected]",
role = c("aut", "cre")
),
person(
"Peter", "Hickey", email = "[email protected]", role = "ctb"
),
person(
"Herve", "Pages", email = "[email protected]", role = "ctb"
))
Description: This package provides an interface to 10xGenomics data,
in particular the '1.3 million single cell' dataset. Functionality
provides easy access to the large hdf5 data representation,
including convenient subsetting to data that easily fit in R
memory as dense slices (rows, columns), sparse matrices, or
'DelayedArray' instances.
Depends: R (>= 3.4.0), methods, Matrix, SummarizedExperiment,
DelayedArray (>= 0.3.7)
Imports: rhdf5 (>= 2.19.3-2), tools, BiocGenerics, S4Vectors, IRanges,
HDF5Array (>= 1.7.6), BiocParallel (>= 1.11.2)
Suggests: BiocStyle, knitr, rmarkdown, BiocFileCache,
Rtsne, BiocSklearn, restfulSE
Collate:
TENxGenomics-class.R
coerce.R
TENxMatrix-class.R
tenxSummarizedExperiment.R
tenxiterate.R
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1
VignetteBuilder: knitr