From d140d471892b50093dee93108175d2e8a67d5fd1 Mon Sep 17 00:00:00 2001 From: Graeme Porteous Date: Fri, 30 Aug 2024 16:26:06 +0100 Subject: [PATCH] Add Workflow Jobs for text processing and chunking - Implement ConvertToText, AnonymizeText, and CreateChunks jobs - Update Workflow class to use new job classes --- Gemfile | 1 + Gemfile.lock | 3 ++ app/models/workflow.rb | 12 +++--- app/models/workflow/jobs/anonymize_text.rb | 36 ++++++++++++++++ app/models/workflow/jobs/convert_to_text.rb | 30 ++++++++++++++ app/models/workflow/jobs/create_chunks.rb | 36 ++++++++++++++++ spec/factories/workflow_jobs.rb | 12 ++++++ spec/fixtures/cassettes/test_chunk.yml | 33 +++++++++++++++ .../workflow/jobs/anonymize_text_spec.rb | 22 ++++++++++ .../workflow/jobs/convert_to_text_spec.rb | 22 ++++++++++ .../workflow/jobs/create_chunks_spec.rb | 41 +++++++++++++++++++ spec/models/workflow_spec.rb | 22 +++++----- spec/support/vcr.rb | 5 +++ 13 files changed, 258 insertions(+), 17 deletions(-) create mode 100644 app/models/workflow/jobs/anonymize_text.rb create mode 100644 app/models/workflow/jobs/convert_to_text.rb create mode 100644 app/models/workflow/jobs/create_chunks.rb create mode 100644 spec/fixtures/cassettes/test_chunk.yml create mode 100644 spec/models/workflow/jobs/anonymize_text_spec.rb create mode 100644 spec/models/workflow/jobs/convert_to_text_spec.rb create mode 100644 spec/models/workflow/jobs/create_chunks_spec.rb create mode 100644 spec/support/vcr.rb diff --git a/Gemfile b/Gemfile index d5bc56a3ac..641041417f 100644 --- a/Gemfile +++ b/Gemfile @@ -199,6 +199,7 @@ group :test, :development do gem 'rspec-activemodel-mocks', '~> 1.2.0' gem 'rspec-rails', '~> 7.0.1' gem 'pry', '~> 0.14.2' + gem 'vcr', '~> 6.3.1' end group :development do diff --git a/Gemfile.lock b/Gemfile.lock index 26915cb3a6..58dced38c0 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -569,6 +569,8 @@ GEM unidecoder (1.1.2) uniform_notifier (1.16.0) uri (0.13.0) + vcr (6.3.1) + base64 vpim (24.2.20) web-console (4.2.1) actionview (>= 6.0.0) @@ -697,6 +699,7 @@ DEPENDENCIES uglifier (~> 4.2.0) unicode (~> 0.4.4) unidecoder (~> 1.1.0) + vcr (~> 6.3.1) vpim (~> 24.2.20) web-console (>= 3.3.0) webmock (~> 3.23.1) diff --git a/app/models/workflow.rb b/app/models/workflow.rb index b6685dab32..1b2315b458 100644 --- a/app/models/workflow.rb +++ b/app/models/workflow.rb @@ -2,20 +2,20 @@ # The Workflow class represents a sequence of jobs to be executed on a resource. # # Usage: -# workflow = Workflow.example(resource) +# workflow = Workflow.chunking(resource) # workflow.run # # Class Methods: -# example(resource) - Creates a new example Workflow instance +# chunking(resource) - Creates a new Workflow instance for text chunking # class Workflow - def self.example(resource) + def self.chunking(resource) Workflow.new( resource: resource, jobs: [ - Workflow::Job, - Workflow::Job, - Workflow::Job + Workflow::Jobs::ConvertToText, + Workflow::Jobs::AnonymizeText, + Workflow::Jobs::CreateChunks ] ) end diff --git a/app/models/workflow/jobs/anonymize_text.rb b/app/models/workflow/jobs/anonymize_text.rb new file mode 100644 index 0000000000..1865aa0fbd --- /dev/null +++ b/app/models/workflow/jobs/anonymize_text.rb @@ -0,0 +1,36 @@ +# == Schema Information +# Schema version: 20240905062817 +# +# Table name: workflow_jobs +# +# id :bigint not null, primary key +# type :string +# resource_type :string +# resource_id :bigint +# status :integer +# parent_id :bigint +# metadata :jsonb +# created_at :datetime not null +# updated_at :datetime not null +# + +## +# This class represents a job for anonymizing text using an external command. +# +class Workflow::Jobs::AnonymizeText < Workflow::Job + def perform + file = Tempfile.new + file.write(source) + file.flush + + cmd = [ENV['REDACT_COMMAND'], '--file', file.path].join(' ') + IO.popen(cmd, &:read) + + ensure + file.close + end + + def content_type + 'text/plain' + end +end diff --git a/app/models/workflow/jobs/convert_to_text.rb b/app/models/workflow/jobs/convert_to_text.rb new file mode 100644 index 0000000000..6dda181ed8 --- /dev/null +++ b/app/models/workflow/jobs/convert_to_text.rb @@ -0,0 +1,30 @@ +# == Schema Information +# Schema version: 20240905062817 +# +# Table name: workflow_jobs +# +# id :bigint not null, primary key +# type :string +# resource_type :string +# resource_id :bigint +# status :integer +# parent_id :bigint +# metadata :jsonb +# created_at :datetime not null +# updated_at :datetime not null +# + +## +# This class is responsible for converting HTML content to plain text. +# +class Workflow::Jobs::ConvertToText < Workflow::Job + include ActionView::Helpers::SanitizeHelper + + def perform + strip_tags(sanitize(source)) + end + + def content_type + 'text/plain' + end +end diff --git a/app/models/workflow/jobs/create_chunks.rb b/app/models/workflow/jobs/create_chunks.rb new file mode 100644 index 0000000000..375e6c735b --- /dev/null +++ b/app/models/workflow/jobs/create_chunks.rb @@ -0,0 +1,36 @@ +# == Schema Information +# Schema version: 20240905062817 +# +# Table name: workflow_jobs +# +# id :bigint not null, primary key +# type :string +# resource_type :string +# resource_id :bigint +# status :integer +# parent_id :bigint +# metadata :jsonb +# created_at :datetime not null +# updated_at :datetime not null +# + +## +# This class represents a job in the workflow system that creates chunks for a resource. +# +class Workflow::Jobs::CreateChunks < Workflow::Job + after_destroy :destroy_chunks + + def perform + resource.chunks.create!(text: source).to_gid + end + + def content_type + 'application/json' + end + + private + + def destroy_chunks + resource.chunks.destroy_all + end +end diff --git a/spec/factories/workflow_jobs.rb b/spec/factories/workflow_jobs.rb index 56aaa25b20..cdea1fc89c 100644 --- a/spec/factories/workflow_jobs.rb +++ b/spec/factories/workflow_jobs.rb @@ -16,5 +16,17 @@ FactoryBot.define do factory :workflow_job, class: 'Workflow::Job' do resource { build(:foi_attachment) } + + factory :convert_to_text, class: 'Workflow::Jobs::ConvertToText' do + source { '' } + end + + factory :anonymize_text, class: 'Workflow::Jobs::AnonymizeText' do + source { '' } + end + + factory :create_chunks, class: 'Workflow::Jobs::CreateChunks' do + source { '' } + end end end diff --git a/spec/fixtures/cassettes/test_chunk.yml b/spec/fixtures/cassettes/test_chunk.yml new file mode 100644 index 0000000000..ab1943cd56 --- /dev/null +++ b/spec/fixtures/cassettes/test_chunk.yml @@ -0,0 +1,33 @@ +--- +http_interactions: +- request: + method: post + uri: http://127.0.0.1:11434/api/embeddings + body: + encoding: UTF-8 + string: '{"prompt":"Test chunk","model":"mistral","options":{"temperature":0.0}}' + headers: + User-Agent: + - Faraday v2.10.1 + Content-Type: + - application/json + Accept-Encoding: + - gzip;q=1.0,deflate;q=0.6,identity;q=0.3 + Accept: + - "*/*" + response: + status: + code: 200 + message: OK + headers: + Content-Type: + - application/json; charset=utf-8 + Date: + - Fri, 13 Sep 2024 11:18:40 GMT + Transfer-Encoding: + - chunked + body: + encoding: UTF-8 + string: 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+ recorded_at: Fri, 13 Sep 2024 11:18:40 GMT +recorded_with: VCR 6.3.1 diff --git a/spec/models/workflow/jobs/anonymize_text_spec.rb b/spec/models/workflow/jobs/anonymize_text_spec.rb new file mode 100644 index 0000000000..a03a559900 --- /dev/null +++ b/spec/models/workflow/jobs/anonymize_text_spec.rb @@ -0,0 +1,22 @@ +require 'spec_helper' + +RSpec.describe Workflow::Jobs::AnonymizeText, type: :model do + let(:job) { FactoryBot.build(:anonymize_text) } + + it 'inherits from Workflow::Job' do + expect(job).to be_a(Workflow::Job) + end + + describe '#perform' do + it 'calls an external command to anonymize text' do + allow(IO).to receive(:popen).and_return('Anonymized text') + expect(job.perform).to eq('Anonymized text') + end + end + + describe '#content_type' do + it 'returns the correct content type' do + expect(job.content_type).to eq('text/plain') + end + end +end diff --git a/spec/models/workflow/jobs/convert_to_text_spec.rb b/spec/models/workflow/jobs/convert_to_text_spec.rb new file mode 100644 index 0000000000..bbea419ba3 --- /dev/null +++ b/spec/models/workflow/jobs/convert_to_text_spec.rb @@ -0,0 +1,22 @@ +require 'spec_helper' + +RSpec.describe Workflow::Jobs::ConvertToText, type: :model do + let(:job) { FactoryBot.build(:convert_to_text) } + + it 'inherits from Workflow::Job' do + expect(job).to be_a(Workflow::Job) + end + + describe '#perform' do + it 'converts HTML to plain text' do + job.source = '

Hello World

' + expect(job.perform).to eq('Hello World') + end + end + + describe '#content_type' do + it 'returns the correct content type' do + expect(job.content_type).to eq('text/plain') + end + end +end diff --git a/spec/models/workflow/jobs/create_chunks_spec.rb b/spec/models/workflow/jobs/create_chunks_spec.rb new file mode 100644 index 0000000000..39bb1febcc --- /dev/null +++ b/spec/models/workflow/jobs/create_chunks_spec.rb @@ -0,0 +1,41 @@ +require 'spec_helper' + +RSpec.describe Workflow::Jobs::CreateChunks, type: :model do + let(:job) { FactoryBot.build(:create_chunks) } + + it 'inherits from Workflow::Job' do + expect(job).to be_a(Workflow::Job) + end + + describe '#perform' do + it 'creates a chunk for the resource' do + VCR.use_cassette('test_chunk') do + resource = FactoryBot.create(:foi_attachment) + job.resource = resource + job.source = 'Test chunk' + + expect { job.perform }.to change { resource.chunks.count }.by(1) + end + end + end + + describe '#content_type' do + it 'returns the correct content type' do + expect(job.content_type).to eq('application/json') + end + end + + describe 'callbacks' do + it 'destroys associated chunks when the job is destroyed' do + VCR.use_cassette('test_chunk') do + resource = FactoryBot.create( + :foi_attachment, chunks: [FactoryBot.build(:chunk)] + ) + job.resource = resource + job.save! + + expect { job.destroy }.to change { resource.chunks.count }.to(0) + end + end + end +end diff --git a/spec/models/workflow_spec.rb b/spec/models/workflow_spec.rb index c727670234..bf60e9d0e4 100644 --- a/spec/models/workflow_spec.rb +++ b/spec/models/workflow_spec.rb @@ -3,22 +3,22 @@ RSpec.describe Workflow do let(:resource) { FactoryBot.build(:foi_attachment) } - describe '.example' do - it 'creates a new Workflow instance with example jobs' do - workflow = Workflow.example(resource) + describe '.chunking' do + it 'creates a new Workflow instance with chunking jobs' do + workflow = Workflow.chunking(resource) expect(workflow).to be_a(Workflow) expect(workflow.jobs.map(&:class)).to eq( [ - Workflow::Job, - Workflow::Job, - Workflow::Job + Workflow::Jobs::ConvertToText, + Workflow::Jobs::AnonymizeText, + Workflow::Jobs::CreateChunks ] ) end end describe '#initialize' do - let(:jobs) { [Workflow::Job] } + let(:jobs) { [Workflow::Jobs::ConvertToText] } let(:workflow) { Workflow.new(resource: resource, jobs: jobs) } it 'sets the resource and jobs' do @@ -28,7 +28,7 @@ end describe '#run' do - let(:workflow) { Workflow.example(resource) } + let(:workflow) { Workflow.chunking(resource) } let(:last_job) { workflow.jobs.last } context 'when the last job is completed' do @@ -51,8 +51,8 @@ end describe '#run_job' do - let(:workflow) { Workflow.example(resource) } - let(:job_class) { WorkflowJob } + let(:workflow) { Workflow.chunking(resource) } + let(:job_class) { Workflow::Jobs::ConvertToText } it 'queues, runs, and resets jobs as needed' do initial_job = double('initial_job', pending!: true, run: true) @@ -72,7 +72,7 @@ end describe '#jobs' do - let(:workflow) { Workflow.example(resource) } + let(:workflow) { Workflow.chunking(resource) } it 'returns an array of job instances' do expect(workflow.jobs).to all(be_a(Workflow::Job)) diff --git a/spec/support/vcr.rb b/spec/support/vcr.rb new file mode 100644 index 0000000000..5f65084ce3 --- /dev/null +++ b/spec/support/vcr.rb @@ -0,0 +1,5 @@ +VCR.configure do |config| + config.cassette_library_dir = "spec/fixtures/cassettes" + config.hook_into :webmock + config.configure_rspec_metadata! +end