Skip to content

Releases: nanoporetech/medaka

v0.4.0 Release Candidate 1

05 Nov 14:29
Compare
Choose a tag to compare
Pre-release
  • Faster Generation of inference features
  • Remove redundant samtools tview code
  • Ability to handle multiple read types

v0.3.0

08 Aug 13:58
2f896a7
Compare
Choose a tag to compare
  • New non-RLE model
  • Updated documentation and benchmarks
  • Bug fixes
  • medaka_consensus no longer needs a pomoxis installation to run
  • Dockerfile to build a medaka Docker image

v0.2.0

22 Jan 21:52
Compare
Choose a tag to compare
  • Release with pre-trained model.
  • Updated walkthrough and benchmarks.

v0.1.0

26 Oct 14:24
Compare
Choose a tag to compare
  • Overhaul API
  • Add walkthrough

v0.0.2

04 Sep 11:17
Compare
Choose a tag to compare
  • Generate pileup using samtools tview.
  • Updated default model architecture.
  • Extensive package restructuring.
  • New features.py with two example feature functions, making it easier for developers to experiment with their own features.

v0.0.1

01 Sep 14:45
Compare
Choose a tag to compare
v0.0.1 Pre-release
Pre-release

First prerelease. Simple consensus network using pileup counts.