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class: center, middle
name:opening
## The International Brain Station (TIBS)
<br><br>
.center[
Joshua T. Vogelstein
<br>
JHU Kavli Neuroscience Discovery Institute
<!-- {[bme](http://www.bme.jhu.edu/),[icm](http://icm.jhu.edu/),[cis](http://cis.jhu.edu/),[idies](http://idies.jhu.edu/),kavli,[cs](http://engineering.jhu.edu/computer-science/), [ams](http://engineering.jhu.edu/ams/), [neuro](http://neuroscience.jhu.edu/)} | [jhu](https://www.jhu.edu/) -->
<br>
questions: [[email protected]](mailto:jovo at jhu dot edu)
<br>
slides: <http://brainx.io/UN>
]
---
### History
<br>
- Global Brain Workshop, April 5-6, 2016
- 60+ scientists
- 15+ observers from international funding community
- 12+ countries represented
<!-- - Open Data Ecosystem for Neuroscience, July 25-26, 2016 -->
<!-- - Coding sprint for a new neuroimaging data processing platform, August 1-4, 2016 -->
<br>
.center[Ideas evolved from discussions
<br>
before, at, and after workshop.]
---
### Inspirational Work
<br>
1. Human Genome Project in molecular genetics
2. Sloan Digital Sky Survery in cosmology
<br>
Reference data and cloud ecosystems revolutionized these disciplines
---
class: center
## What is TIBS?
<br>
A living *ecosystem* that enables anybody to utilize or contribute
<center><img src="images/sic_framework.png" style="width: 750px;"/></center>
(4 scientist roles)
---
### Design Goals
<br><br>
- .s[Integrates] data and algorithms and theory
- .s[Sensitive] culturally
- .s[Mobile] compliant (+3.2B people)
- .s[Data] intensive analysis
<!-- - .s[Democratize] science (anybody can contribute and utilize)
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### Stages of Scientific Discovery
<br>
1. Data - data collection dashboards
2. Store - multimodal cloud storage
4. Algorithms - reference pipelines
3. Containers - continuous integration services
5. Theory - data modeling bots
6. Analyses - digital notebooks
6. Annotations - interactive environments
5. Design - quality/control trade-off calculator
5. Search - metadata query standards
4. Educate - digital multilingual documentation/tutorials
.center[
Building on the shoulders of everyone.
]
---
## Preliminary Results
<br>
- Open Data Ecosystem for Neuroscience, July 2016
- Future and Present of US Brain Initiative, August 2016
- Coordinating Global Brain Projects, September 2016
- Global Brain Lab, September 2016
- NSF NeuroNex RFP, October 2016
---
### Micro-Prototype 1: EM+AT Data
<br>
.pull-right[<img src="images/AT.png" style="width: 400px;"/>]
.pull-left[
1. Data - Allen Institute
2. Store - JHU+Amazon
4. Algorithms - Janelia
3. Containers - JHU via Docker
5. Theory - Duke
6. Annotations - UNC
]
<br><br>
Everyone meets at TIBS
Live demo: https://goo.gl/JPDTqR
---
## Expected Outcomes
<br><br>
- Facilitate global collaborations
- Inspire open science
- Enable success of grand challenges for brain science
- What makes our brains unique?
- How does the brain solve the complex problems of intelligence?
- How can we augment mental health decisions with data?
- Translate ideas to other disciplines
---
## Next Steps
<br>
- Build international coalition
- Continue expanding prototypes
- Inspire cultural shift in neuroscience (ODEN)
---
class: middle, center
# Questions?
<!-- ### Funding -->
<!-- <br /> -->
<br>
<br>
<!-- ____ -->
e: [[email protected]](mailto:[email protected])
w: [brainx.io](http://brainx.io)
<!-- ____ -->
<!-- [more slides](http://docs.neurodata.io/ndintro/more.html) -->
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