diff --git a/.github/workflows/test-coverage.yml b/.github/workflows/test-coverage.yml index b255f003..4304c1c3 100644 --- a/.github/workflows/test-coverage.yml +++ b/.github/workflows/test-coverage.yml @@ -37,10 +37,8 @@ jobs: run: | output=$($CONDA/bin/nf-test coverage --silent | grep -vE "^(Load|Warning|Files)") echo $output - files=$(echo $output | grep " •") - coverage=$(echo $output | grep "COVERAGE") - echo "::set-output name=files_output::$files" - echo "::set-output name=coverage_output::$coverage" + echo $output | grep " •" >> $files_output + echo $output | grep "COVERAGE" >> $coverage_output - name: Comment coverage uses: bubkoo/auto-comment@v1