diff --git a/workflows/circdna.nf b/workflows/circdna.nf index d8e73704..6dd647e6 100644 --- a/workflows/circdna.nf +++ b/workflows/circdna.nf @@ -23,7 +23,7 @@ if (!(params.input_format == "FASTQ" | params.input_format == "BAM")) { } // Modify fasta channel to include meta data -ch_fasta_meta = ch_fasta.map{ it -> [[id:it[0].baseName], it] } +ch_fasta_meta = ch_fasta.map{ it -> [[id:it[0].baseName], it] }.collect() branch = params.circle_identifier.split(",") run_circexplorer2 = ("circexplorer2" in branch)