diff --git a/workflows/scrnaseq.nf b/workflows/scrnaseq.nf index f41752ec..12f6e3b8 100644 --- a/workflows/scrnaseq.nf +++ b/workflows/scrnaseq.nf @@ -37,7 +37,7 @@ workflow SCRNASEQ { error "Only cellranger supports `protocol = 'auto'`. Please specify the protocol manually!" } - // collecting paths from genome attributes (optional) + // collect paths from genome attributes file (e.g. iGenomes.config; optional) params.fasta = getGenomeAttribute('fasta') params.gtf = getGenomeAttribute('gtf') params.star_index = getGenomeAttribute('star')