Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

gene symbols for alevin-fry #184

Open
grst opened this issue Nov 17, 2022 · 1 comment
Open

gene symbols for alevin-fry #184

grst opened this issue Nov 17, 2022 · 1 comment
Labels
enhancement New feature or request

Comments

@grst
Copy link
Member

grst commented Nov 17, 2022

Description of feature

Folow up of #160 by @kafkasl. We don't yet add gene symbols in the output files when using alevin-fry as aligner.

As per this discussion on slack we now know a way to get the gene mapping for alevin (-> upgrade simpleaf version). But we agreed on following up on that in a separate PR.
@grst grst added the enhancement New feature or request label Nov 17, 2022
@grst grst mentioned this issue Nov 17, 2022
Closed
@grst grst added this to scrnaseq Feb 21, 2023
@github-project-automation github-project-automation bot moved this to Todo in scrnaseq Feb 21, 2023
@grst grst mentioned this issue Mar 7, 2024
Open
@grst grst removed this from scrnaseq Nov 7, 2024
@grst
Copy link
Member Author

grst commented Nov 7, 2024

Depends on #361

@grst grst moved this to Todo - medium priority in differentialabundance Nov 7, 2024
@grst grst added this to scrnaseq Nov 7, 2024
@github-project-automation github-project-automation bot moved this to Todo high priority in scrnaseq Nov 7, 2024
@grst grst moved this from Todo high priority to Todo - medium priority in scrnaseq Nov 7, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
scrnaseq
Status: Todo - medium priority
Milestone
No milestone
Development

No branches or pull requests
1 participant
@grst