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CMakeLists.txt
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CMakeLists.txt
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###
#
# @copyright 2013-2020 Bordeaux INP, CNRS (LaBRI UMR 5800), Inria,
# Univ. Bordeaux. All rights reserved.
#
# @version 6.0.3
# @author Mathieu Faverge
# @date 2020-02-05
#
###
cmake_minimum_required (VERSION 2.8)
project (PASTIX C CXX Fortran)
include(CMakeDependentOption)
include(CheckFunctionExists)
# The current version number
set(PASTIX_VERSION_MAJOR 6)
set(PASTIX_VERSION_MINOR 1)
set(PASTIX_VERSION_MICRO 0)
set(PASTIX_VERSION "${PASTIX_VERSION_MAJOR}.${PASTIX_VERSION_MINOR}.${PASTIX_VERSION_MICRO}")
# Add extra cmake module path and initialize morse cmake modules
# --------------------------------------------------------------
list(APPEND CMAKE_MODULE_PATH ${CMAKE_SOURCE_DIR}/cmake_modules)
include(AddSourceFiles)
if (IS_DIRECTORY ${CMAKE_SOURCE_DIR}/cmake_modules/morse_cmake/modules)
set( MORSE_CMAKE_MODULE_PATH ${CMAKE_SOURCE_DIR}/cmake_modules/morse_cmake/modules )
list(APPEND CMAKE_MODULE_PATH ${MORSE_CMAKE_MODULE_PATH})
include(MorseInit)
else()
message(FATAL_ERROR "Submodule cmake_morse not initialized - run `git submodule update --init`")
endif()
# Define precision supported by PaStiX
# ------------------------------------
set( RP_PASTIX_DICTIONNARY
${CMAKE_CURRENT_SOURCE_DIR}/cmake_modules/local_subs.py )
set( RP_PASTIX_PRECISIONS "p;s;d;c;z" )
include(RulesPrecisions)
### System parameter detection
include(CheckSystem)
# Set the RPATH config
# --------------------
# use, i.e. don't skip the full RPATH for the build tree
set(CMAKE_SKIP_BUILD_RPATH FALSE)
# when building, don't use the install RPATH already
# (but later on when installing)
set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
# the RPATH to be used when installing
list(APPEND CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/lib")
### Misc options
option(BUILD_SHARED_LIBS
"Build shared libraries" OFF)
option(BUILD_64bits
"Build 64 bits mode" ON)
### Distributed engine parameters
option(PASTIX_WITH_MPI
"Build PaStiX for distributed memory with MPI" OFF)
### GPU engine parameters
option(PASTIX_WITH_CUDA
"Enable GPU support using CUDA kernels" OFF)
cmake_dependent_option(PASTIX_CUDA_FERMI
"Enable the Fermi kernel instead of the batched kernel" OFF "PASTIX_WITH_CUDA" OFF)
### Tracing parameters
option(PASTIX_WITH_EZTRACE
"Enable Eztrace for tracing CPU and GPU kernels" OFF)
### Runtime engines
option(PASTIX_WITH_STARPU
"Build PaStiX with StarPU runtime support" OFF)
option(PASTIX_WITH_PARSEC
"Build PaStiX with PaRSEC runtime support" OFF)
# Internal options
option(PASTIX_GENERATE_MODEL
"Enable performances profiling for model generation" OFF)
# Internal options
option(PASTIX_WITH_FORTRAN
"Enable Fortran files/interface/examples to be compiled" ON)
cmake_dependent_option(PASTIX_DISTRIBUTED
"Enable the distributed interface (requires PASTIX_WITH_MPI)" OFF "PASTIX_WITH_MPI" OFF)
cmake_dependent_option(PASTIX_THREAD_COMM
"Enable the specific communication thread (requires PASTIX_WITH_MPI)" ON "PASTIX_WITH_MPI" OFF)
option(PASTIX_INT64
"Choose between int32 and int64 for integer representation" ON)
# Precisions generated
if(NOT PASTIX_PRECISIONS)
set(PASTIX_PRECISIONS "s;d;c;z" CACHE STRING "The precisions to compile in PaSTiX (accepts a colon separated list of s;d;c;z)" FORCE)
else()
set(PASTIX_PRECISIONS "${PASTIX_PRECISIONS}" CACHE STRING "The precisions to compile in PaSTiX (accepts a colon separated list of s;d;c;z)" FORCE)
endif()
# Ordering step options
option(PASTIX_ORDERING_SCOTCH
"Enable Scotch Ordering" ON)
option(PASTIX_ORDERING_METIS
"Enable Metis ordering" OFF)
cmake_dependent_option(PASTIX_ORDERING_PTSCOTCH
"Activate the PT-scotch ordering (requires PASTIX_DISTRIBUTED and PASTIX_ORDERING_SCOTCH)" ON
"PASTIX_DISTRIBUTED;PASTIX_ORDERING_SCOTCH" OFF)
# Symbolic factorization options
option(PASTIX_SYMBOL_DUMP_SYMBMTX
"Dump the generated symbol matrix in a postscript file" OFF)
option(PASTIX_ORDER_DRAW_LASTSEP
"Dump the last separator in a ivview file" OFF)
# Analyze step options
option(PASTIX_BLEND_DEEPEST_DISTRIB
"Enable the candidate distribution to go to the deepest node matching the criterion" ON)
option(PASTIX_BLEND_PROPMAP_2STEPS
"Enable the two stages proportionnal mapping" OFF)
# Numerical factorization options
option(PASTIX_NUMFACT_DUMP_SOLVER
"Dump the generated factorized matrix in a postscript file with information on block's compressibility" OFF)
option(PASTIX_SUPERNODE_STATS
"Enable statistics per original supernodes" OFF)
# Options to check
option(FORGET_PARTITION
"Force to forget the partition generated by Scotch" OFF)
option(COMPACT_SMX
"Optimization for solve computations (TODO: check if not obsolete because results don't converge)" OFF)
# Options to increase verbosity while debuging
option(PASTIX_DEBUG_GRAPH
"Debug the graph data structure" OFF)
option(PASTIX_DEBUG_ORDERING
"Debug the ordering step" OFF)
option(PASTIX_DEBUG_SYMBOL
"Debug the symbol matrix factorization" OFF)
option(PASTIX_DEBUG_BLEND
"Debug the analyze step" OFF)
option(PASTIX_DEBUG_DUMP_COEFTAB
"Dump all cblk on disk after modifications" OFF)
cmake_dependent_option(PASTIX_DEBUG_FACTO
"Debug the factorization step" OFF
"PASTIX_WITH_MPI" OFF)
option(PASTIX_DEBUG_SOLVE
"Debug the solve step" OFF)
cmake_dependent_option(PASTIX_DEBUG_PARSEC
"Debug the parsec implementation of the factorization step" OFF
"PASTIX_WITH_PARSEC" OFF)
option(PASTIX_DEBUG_LR
"Debug the lowrank kernels (Valgrind)" OFF)
option(PASTIX_DEBUG_LR_NANCHECK
"Debug the lowrank kernels (nancheck)" OFF)
option(PASTIX_DEBUG_GMRES
"Debug the gmres refinment by enabling the computation of the true resiudal at each iteration" OFF)
option(PASTIX_DEBUG_EXIT_ON_SIGSEGV
"Generate a segfault on exit calls to trakc in gdb" OFF)
cmake_dependent_option(PASTIX_DEBUG_MPI
"Dump all the MPI messages" OFF
"PASTIX_WITH_MPI" OFF)
###############################################################################
# Look for dependencies #
#########################
if (PASTIX_WITH_FORTRAN)
include(FortranCInterface)
FortranCInterface_HEADER(common/FCmangle.h
MACRO_NAMESPACE "FC_"
SYMBOL_NAMESPACE "FC_")
link_directories( ${CMAKE_Fortran_IMPLICIT_LINK_DIRECTORIES} )
endif()
# PaStiX depends on LAPACKE and CBLAS
#------------------------------------
find_package(CBLAS) # Should be REQUIRED for BLAS sequential only
if(CBLAS_FOUND)
message(STATUS "cblas: ${CBLAS_INCLUDE_DIRS}")
include_directories(${CBLAS_INCLUDE_DIRS})
endif()
find_package(LAPACKE) # Should be also REQUIRED
if(LAPACKE_FOUND)
message(STATUS "lapacke: ${LAPACKE_INCLUDE_DIRS}")
include_directories(${LAPACKE_INCLUDE_DIRS})
endif()
### Store dependencies not handled with pkg-config
set( DEPS_LIBRARIES
${LAPACKE_LIBRARIES_DEP}
${CBLAS_LIBRARIES_DEP}
)
list(APPEND CMAKE_INSTALL_RPATH
${LAPACKE_LIBRARY_DIRS_DEP}
${CBLAS_LIBRARY_DIRS_DEP}
)
# PaStiX depends on HwLoc
#---------------------------
find_package(HWLOC)
set(HAVE_HWLOC ${HWLOC_FOUND})
if( HWLOC_FOUND )
link_directories( ${HWLOC_LIBRARY_DIRS} )
link_libraries( ${HWLOC_LIBRARIES} )
include_directories( ${HWLOC_INCLUDE_DIRS} )
list(APPEND CMAKE_INSTALL_RPATH
${HWLOC_LIBRARY_DIRS}
)
endif (HWLOC_FOUND)
# PaStiX might depend on MPI
#------------------------------
if (PASTIX_WITH_MPI)
# Force the detection of the C library
find_package(MPI)
string(REPLACE ";" " " MPI_C_COMPILE_FLAGS "${MPI_C_COMPILE_FLAGS}")
if (MPI_C_FOUND)
list(APPEND EXTRA_LIBS ${MPI_C_LIBRARIES} )
include_directories( ${MPI_C_INCLUDE_PATH} )
# Check to see if support for MPI 2.0 is available
set(saved_include "${CMAKE_REQUIRED_INCLUDES}" )
set(saved_libs "${CMAKE_REQUIRED_LIBRARIES}")
set(CMAKE_REQUIRED_INCLUDES "${CMAKE_REQUIRED_INCLUDES};${MPI_C_INCLUDE_PATH}")
set(CMAKE_REQUIRED_LIBRARIES "${CMAKE_REQUIRED_LIBRARIES};${MPI_C_LIBRARIES}")
check_function_exists(MPI_Type_create_resized HAVE_MPI_20)
set(CMAKE_REQUIRED_INCLUDES "${saved_include}")
set(CMAKE_REQUIRED_LIBRARIES "${saved_libs}")
else (MPI_C_FOUND)
message(FATAL_ERROR "MPI is required but was not found. Please provide an MPI compiler in your environment or configure with -DPASTIX_WITH_MPI=OFF")
endif (MPI_C_FOUND)
endif (PASTIX_WITH_MPI)
# PaStiX might depend on CUDA
#-------------------------------
if( PASTIX_WITH_CUDA )
find_package(CUDA)
set(HAVE_CUDA ${CUDA_FOUND})
if (CUDA_FOUND)
if(CUDA_VERSION VERSION_LESS "3.0")
set(CUDA_HOST_COMPILATION_CPP OFF)
endif(CUDA_VERSION VERSION_LESS "3.0")
set(CUDA_BUILD_EMULATION OFF)
include_directories(${CUDA_INCLUDE_DIRS})
link_libraries(${CUDA_LIBRARIES}) # need CUDA libs to link.
set(saved_include "${CMAKE_REQUIRED_INCLUDES}")
set(saved_libs "${CMAKE_REQUIRED_LIBRARIES}")
set(CMAKE_REQUIRED_INCLUDES "${CMAKE_REQUIRED_INCLUDES};${CUDA_INCLUDE_DIRS}")
set(CMAKE_REQUIRED_LIBRARIES "${CMAKE_REQUIRED_LIBRARIES};${CUDA_LIBRARIES}")
if(CUDA_VERSION VERSION_LESS "4.0")
set(CUDA_HAVE_PEER_DEVICE_MEMORY_ACCESS 0)
else()
check_function_exists(cuDeviceCanAccessPeer CUDA_HAVE_PEER_DEVICE_MEMORY_ACCESS)
endif()
set(CMAKE_REQUIRED_INCLUDES "${saved_include}")
set(CMAKE_REQUIRED_LIBRARIES "${saved_libs}")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -DCUDA_SM_VERSION=20")
else(CUDA_FOUND)
message(FATAL_ERROR "CUDA is required but was not found. Please provide a CUDA library in your environment or configure with -DPASTIX_WITH_CUDA=OFF")
endif (CUDA_FOUND)
endif()
# PaStiX might depend on StarPU
#---------------------------------
if (PASTIX_WITH_STARPU)
set(PASTIX_STARPU_VERSION "1.3" CACHE STRING "oldest STARPU version desired")
# Create list of components in order to make a single call to find_package(starpu...)
set(STARPU_COMPONENT_LIST "HWLOC")
if(PASTIX_WITH_MPI)
list(APPEND STARPU_COMPONENT_LIST "MPI")
endif()
if(PASTIX_WITH_CUDA)
list(APPEND STARPU_COMPONENT_LIST "CUDA")
endif()
if(PASTIX_WITH_FXT)
list(APPEND STARPU_COMPONENT_LIST "FXT")
endif()
find_package(STARPU ${PASTIX_STARPU_VERSION} REQUIRED
COMPONENTS ${STARPU_COMPONENT_LIST})
# Add definition and include_dir if found
if(STARPU_FOUND)
include_directories(${STARPU_INCLUDE_DIRS_DEP})
link_directories(${STARPU_LIBRARY_DIRS_DEP})
set(CMAKE_REQUIRED_INCLUDES "${STARPU_INCLUDE_DIRS_DEP}")
if(PASTIX_USE_FXT)
# check if fxt profiling is accessible in starpu and activate it in magmamorse
set(CMAKE_REQUIRED_LIBRARIES "${STARPU_LIBRARIES_DEP}")
unset(STARPU_FXT_START_PROFILING_FOUND CACHE)
check_function_exists(starpu_fxt_start_profiling STARPU_FXT_START_PROFILING_FOUND)
if ( STARPU_FXT_START_PROFILING_FOUND )
message(STATUS "Set HAVE_STARPU_FXT_PROFILING - Activate FxT profiling through StarPU")
add_definitions(-DHAVE_STARPU_FXT_PROFILING)
endif()
endif()
if (PASTIX_WITH_MPI)
# Check if a specific function exist
set(CMAKE_REQUIRED_LIBRARIES "${STARPU_LIBRARIES_DEP}")
unset(STARPU_MPI_DATA_REGISTER_FOUND CACHE)
check_function_exists(starpu_mpi_data_register STARPU_MPI_DATA_REGISTER_FOUND)
if ( STARPU_MPI_DATA_REGISTER_FOUND )
add_definitions(-DHAVE_STARPU_MPI_DATA_REGISTER)
endif()
endif()
list(APPEND CMAKE_INSTALL_RPATH
${STARPU_LIBRARY_DIRS_DEP}
)
else(STARPU_FOUND)
message(FATAL_ERROR "StarPU with ${STARPU_COMPONENT_LIST} components is required but was not found. Please provide the StarPU library in your environment or configure with -DPASTIX_WITH_STARPU=OFF")
endif()
endif (PASTIX_WITH_STARPU)
# PaStiX might depend on Parsec
#------------------------------
if (PASTIX_WITH_PARSEC)
# Create list of components in order to make a single call to find_package(starpu...)
set(PARSEC_COMPONENT_LIST "HWLOC")
if(PASTIX_WITH_MPI)
list(APPEND PARSEC_COMPONENT_LIST "MPI")
endif()
if(PASTIX_WITH_CUDA)
list(APPEND PARSEC_COMPONENT_LIST "CUDA")
endif()
find_package(PARSEC REQUIRED
COMPONENTS ${PARSEC_COMPONENT_LIST})
# Add definition and include_dir if found
if(PARSEC_FOUND)
include_directories(${PARSEC_INCLUDE_DIRS_DEP})
link_directories(${PARSEC_LIBRARY_DIRS_DEP})
list(APPEND CMAKE_INSTALL_RPATH ${PARSEC_LIBRARY_DIRS_DEP})
else()
message(FATAL_ERROR "Parsec with ${PARSEC_COMPONENT_LIST} components is required but was not found. Please provide the PaRSEC library in your environment or configure with -DPASTIX_WITH_PARSEC=OFF")
endif()
# Add the index-array dep management option to PTGCC compilation flags.
include(RulesJDF)
set(PARSEC_PTGPP_CFLAGS "--dep-management;index-array;${PARSEC_PTGPP_CFLAGS}")
endif (PASTIX_WITH_PARSEC)
### Add trace generation
if(PASTIX_WITH_EZTRACE)
if (NOT EZTRACE_FOUND)
find_package(EZTRACE REQUIRED)
endif()
include_directories(${EZTRACE_INCLUDE_DIRS})
link_directories(${EZTRACE_LIBRARY_DIRS})
endif(PASTIX_WITH_EZTRACE)
# PaStiX might depend on Scotch/PT-Scotch
#----------------------------------------
if (PASTIX_ORDERING_PTSCOTCH)
find_package(PTSCOTCH)
if (PTSCOTCH_FOUND)
include_directories( ${PTSCOTCH_INCLUDE_DIRS_DEP} )
link_directories( ${PTSCOTCH_LIBRARY_DIRS_DEP} )
link_libraries( ${PTSCOTCH_LIBRARIES_DEP} )
list(APPEND CMAKE_INSTALL_RPATH
${PTSCOTCH_LIBRARY_DIRS_DEP}
)
else (PTSCOTCH_FOUND)
message(FATAL_ERROR "PTSCOTCH is required if PASTIX_ORDERING_PTSCOCTH is on but was not found. Please provide an PtScotch library in your environment or configure with -DPASTIX_ORDERING_PTSCOTCH=OFF")
endif (PTSCOTCH_FOUND)
# Check coherency for integer size
if(PASTIX_INT64 AND NOT PTSCOTCH_Num_8)
message(FATAL_ERROR "PASTIX_INT64 is enabled and provided PT-Scotch is not compiled with int64 support.")
endif()
if(NOT PASTIX_INT64 AND NOT PTSCOTCH_Num_4)
message(FATAL_ERROR "PASTIX_INT64 is disabled and provided PT-Scotch is not compiled with int32 support.")
endif()
endif()
if (PASTIX_ORDERING_SCOTCH)
find_package(SCOTCH)
if (SCOTCH_FOUND)
message(STATUS "Scotch inlude dirs: ${SCOTCH_INCLUDE_DIRS}" )
include_directories( ${SCOTCH_INCLUDE_DIRS} )
link_directories( ${SCOTCH_LIBRARY_DIRS} )
link_libraries( ${SCOTCH_LIBRARIES} )
list(APPEND CMAKE_INSTALL_RPATH
${SCOTCH_LIBRARY_DIRS}
)
else()
message(FATAL_ERROR "Scotch is required but was not found. Please provide a Scotch library in your environment or configure with -DPASTIX_ORDERING_SCOTCH=OFF")
endif()
# Check coherency for integer size
if(PASTIX_INT64 AND NOT SCOTCH_Num_8)
message(FATAL_ERROR "PASTIX_INT64 is enabled and provided Scotch is not compiled with int64 support.")
endif()
if(NOT PASTIX_INT64 AND NOT SCOTCH_Num_4)
message(FATAL_ERROR "PASTIX_INT64 is disabled and provided Scotch is not compiled with int32 support.")
endif()
endif()
set( DEPS_LIBRARIES
${DEPS_LIBRARIES}
${PTSCOTCH_LIBRARIES_DEP}
${SCOTCH_LIBRARIES}
)
# PaStiX might depend on Metis/ParMetis
#--------------------------------------
if (PASTIX_ORDERING_METIS)
find_package(METIS)
if (METIS_FOUND)
include_directories( ${METIS_INCLUDE_DIRS} )
link_directories( ${METIS_LIBRARY_DIRS} )
link_libraries( ${METIS_LIBRARIES} )
list(APPEND CMAKE_INSTALL_RPATH
${METIS_LIBRARY_DIRS}
)
else()
message(FATAL_ERROR "Metis is required but was not found. Please provide a Metis library in your environment or configure with -DPASTIX_ORDERING_METIS=OFF")
endif()
# Check coherency for integer size
if(PASTIX_INT64 AND NOT METIS_Idx_8)
message(FATAL_ERROR "PASTIX_INT64 is enabled and provided Metis is not compiled with int64 support.")
endif()
if(NOT PASTIX_INT64 AND NOT METIS_Idx_4)
message(FATAL_ERROR "PASTIX_INT64 is disabled and provided Metis is not compiled with int32 support.")
endif()
endif()
set( DEPS_LIBRARIES
${DEPS_LIBRARIES}
${METIS_LIBRARIES}
)
# PaStiX might depend on GTG
#---------------------------
find_package(GTG QUIET)
if (GTG_FOUND)
# Symbolic factorization options
option(PASTIX_BLEND_GENTRACE
"Allow trace generation in Blend simulation" OFF)
if (PASTIX_BLEND_GENTRACE)
include_directories( ${GTG_INCLUDE_DIRS} )
link_directories( ${GTG_LIBRARY_DIRS} )
endif()
else()
set( PASTIX_BLEND_GENTRACE OFF )
endif()
# valgrind detection
#-------------------
find_program( MEMORYCHECK_COMMAND valgrind )
set( MEMORYCHECK_COMMAND_OPTIONS "--trace-children=yes --leak-check=full" )
#
##
###
# Finished detecting the system, lets do our own things now
###
##
#
# Compile the spm library
if ( PASTIX_WITH_FORTRAN )
find_package( SPM QUIET COMPONENTS FORTRAN )
else()
find_package( SPM QUIET )
endif()
if ( SPM_FOUND )
if( (PASTIX_INT64 AND (NOT SPM_INTSIZE EQUAL 8)) OR (PASTIX_INT32 AND (NOT SPM_INTSIZE EQUAL 4)) )
message( WARNING "PASTIX_INT64 is enabled and provided SPM does not have the same support. Internal SPM will be compiled.")
unset( SPM_FOUND )
endif()
endif()
if ( SPM_FOUND )
message( STATUS "Use installed SPM" )
include_directories(${SPM_INCLUDE_DIRS})
else()
message( STATUS "Use internal SPM" )
add_subdirectory(spm)
set( SPM_LIBRARIES spm )
set( SPM_LIBRARIES_FORTRAN spmf )
include_directories("spm/include")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/spm/include")
endif()
# Disable restrict (temporary)
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Drestrict=")
set(PROJECT_INCLUDE_DIR "${CMAKE_CURRENT_BINARY_DIR}/include")
include_directories(BEFORE "${PROJECT_INCLUDE_DIR}")
STRING(COMPARE EQUAL ${CMAKE_CURRENT_BINARY_DIR} ${CMAKE_CURRENT_SOURCE_DIR} PROJECT_COMPILE_INPLACE)
if(NOT PROJECT_COMPILE_INPLACE)
include_directories(BEFORE "${CMAKE_CURRENT_SOURCE_DIR}/include")
endif(NOT PROJECT_COMPILE_INPLACE)
#Configuration header
configure_file (
"${CMAKE_CURRENT_SOURCE_DIR}/include/pastix/config.h.in"
"${PROJECT_INCLUDE_DIR}/pastix/config.h")
install(FILES "${PROJECT_INCLUDE_DIR}/pastix/config.h" DESTINATION include/pastix)
include_directories("${CMAKE_CURRENT_SOURCE_DIR}")
include_directories("${CMAKE_CURRENT_BINARY_DIR}")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/include")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/include")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/common")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/common")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/kernels")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/kernels")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/bcsc")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/bcsc")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/refinement")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/refinement")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/sopalin")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/blend")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/graph")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/order")
include_directories("${CMAKE_CURRENT_SOURCE_DIR}/symbol")
# Sub modules
set(modules kernels refinement) #csc kernels sopalin common)
foreach (module ${modules})
add_subdirectory(${module})
endforeach()
if (PASTIX_WITH_PARSEC)
include_directories("${CMAKE_CURRENT_BINARY_DIR}/sopalin")
add_subdirectory(sopalin/parsec)
endif()
if (PASTIX_WITH_STARPU)
include_directories("${CMAKE_CURRENT_BINARY_DIR}/sopalin")
add_subdirectory(sopalin/starpu)
endif()
include(RulesPrecisions)
##
# Headers from bcsc directory
##
set(generated_bcsc_headers "")
set(HEADERS
bcsc/bcsc_z.h
)
precisions_rules_py(generated_bcsc_headers
"${HEADERS}"
TARGETDIR "bcsc"
PRECISIONS "p;s;d;c;z")
add_custom_target(bcsc_headers_tgt
DEPENDS ${generated_bcsc_headers} )
##
# Headers from sopalin directory
##
set(generated_sopalin_headers "")
set(HEADERS
sopalin/coeftab_z.h
)
precisions_rules_py(generated_sopalin_headers
"${HEADERS}"
TARGETDIR "sopalin"
PRECISIONS "p;s;d;c;z")
add_custom_target( sopalin_headers
DEPENDS ${generated_sopalin_headers} )
###############
# Source files
##
# Source files from common directory
##
set(generated_common_sources "")
set(SOURCES
common/z_integer.c
)
precisions_rules_py(generated_common_sources
"${SOURCES}"
TARGETDIR "common"
PRECISIONS "p;s;d;c;z"
)
##
# Source files from bcsc directory
##
set(generated_bcsc_sources "")
set(SOURCES
bcsc/bcsc_zinit.c
bcsc/bcsc_znorm.c
bcsc/bcsc_zspmv.c
bcsc/bvec_zcompute.c
)
precisions_rules_py(generated_bcsc_sources
"${SOURCES}"
TARGETDIR "bcsc"
PRECISIONS "p;s;d;c;z"
)
##
# Source files from sopalin directory
##
set(generated_sopalin_sources "")
set(SOURCES
sopalin/coeftab_z.c
sopalin/coeftab_zinit.c
sopalin/sequential_zdiag.c
sopalin/sequential_zgetrf.c
sopalin/sequential_zhetrf.c
sopalin/sequential_zpotrf.c
sopalin/sequential_zpxtrf.c
sopalin/sequential_zsytrf.c
sopalin/sequential_ztrsm.c
)
precisions_rules_py(generated_sopalin_sources
"${SOURCES}"
TARGETDIR "sopalin"
PRECISIONS "p;s;d;c;z"
)
##
# Source files from refinement directory
##
set(generated_refinement_sources "")
set(SOURCES
refinement/z_refine_bicgstab.c
refinement/z_refine_functions.c
refinement/z_refine_gmres.c
refinement/z_refine_grad.c
refinement/z_refine_pivot.c
)
precisions_rules_py(generated_refinement_sources
"${SOURCES}"
TARGETDIR "refinement"
PRECISIONS "p;s;d;c;z"
)
#
# Build the pastix library
#
set(PASTIX_LIB_SRCS
# Files that are fully converted
#
graph/graph.c
graph/graph_compute_projection.c
graph/graph_connected_components.c
graph/graph_io.c
graph/graph_isolate.c
graph/graph_prepare.c
graph/graph_symmetrize.c
#
order/order.c
order/order_add_isolate.c
order/order_amalgamate.c
order/order_apply_level_order.c
order/order_check.c
order/order_find_supernodes.c
order/order_grids.c
order/order_io.c
order/pastix_subtask_order.c
#
symbol/fax_csr.c
symbol/fax_csr_amalgamate.c
symbol/fax_csr_direct.c
symbol/fax_csr_iluk.c
symbol/symbol.c
symbol/symbol_base.c
symbol/symbol_check.c
symbol/symbol_cost.c
symbol/symbol_cost_flops.c
symbol/symbol_cost_perfs.c
symbol/symbol_draw.c
symbol/symbol_expand.c
symbol/symbol_fax_direct.c
symbol/symbol_fax_iluk.c
symbol/symbol_io.c
symbol/symbol_reorder.c
symbol/symbol_reordering.c
symbol/pastix_subtask_reordering.c
symbol/pastix_subtask_symbfact.c
# Files that still require some changes
blend/pastix_subtask_blend.c
blend/pastix_task_analyze.c
blend/blendctrl.c
blend/cand.c
blend/cand_gendot.c
blend/cost.c
blend/elimintree.c
blend/extendVector.c
blend/extracblk.c
blend/propmap.c
blend/simu.c
blend/simu_run.c
blend/simu_task.c
blend/solver.c
blend/solver_backup.c
blend/solver_check.c
blend/solver_copy.c
blend/solver_draw.c
blend/solver_io.c
blend/solver_matrix_gen.c
blend/solver_matrix_gen_utils.c
blend/splitsymbol.c
common/api.c
common/integer.c
common/isched.c
common/models.c
common/get_options.c
common/getline.c
#
bcsc/bcsc.c
bcsc/bvec.c
#
sopalin/coeftab.c
sopalin/schur.c
sopalin/diag.c
sopalin/pastix_task_sopalin.c
sopalin/pastix_task_solve.c
sopalin/pastix.c
#
refinement/pastix_task_refine.c
#
${generated_common_sources}
${generated_bcsc_sources}
${generated_sopalin_sources}
${generated_refinement_sources}
)
set_source_files_properties(
sopalin/coeftab.h
PROPERTIES DEPENDS sopalin_headers
)
if(PASTIX_ORDERING_SCOTCH)
set(PASTIX_LIB_SRCS
${PASTIX_LIB_SRCS}
graph/graph_compute_kway.c
order/order_compute_scotch.c
order/order_draw.c
order/order_supernodes.c
)
endif()
if(PASTIX_ORDERING_PTSCOTCH)
set(PASTIX_LIB_SRCS
${PASTIX_LIB_SRCS}
order/order_compute_ptscotch.c
)
endif()
if(PASTIX_ORDERING_METIS)
list(APPEND PASTIX_LIB_SRCS
order/order_compute_metis.c
)
endif()
if(HWLOC_FOUND)
list(APPEND PASTIX_LIB_SRCS
common/isched_hwloc.c
)
else()
list(APPEND PASTIX_LIB_SRCS
common/isched_nohwloc.c
)
endif()
add_library(pastix
${PASTIX_LIB_SRCS}
)
set_target_properties(pastix PROPERTIES VERSION ${PASTIX_VERSION} SOVERSION ${PASTIX_VERSION_MAJOR}.${PASTIX_VERSION_MINOR})
add_dependencies(pastix
kernels_headers_tgt
bcsc_headers_tgt
refinement_headers_tgt
sopalin_headers
)
target_link_libraries(pastix
${SPM_LIBRARIES}
pastix_kernels
${LAPACKE_LIBRARIES_DEP}
${CBLAS_LIBRARIES_DEP}
)
if(PASTIX_ORDERING_PTSCOTCH)
target_link_libraries(pastix ${PTSCOTCH_LIBRARIES_DEP} )
endif()
if(PASTIX_ORDERING_SCOTCH)
target_link_libraries(pastix ${SCOTCH_LIBRARIES} )
endif()
if(PASTIX_ORDERING_METIS)
target_link_libraries(pastix ${METIS_LIBRARIES} )
endif()
if(PASTIX_WITH_PARSEC)
target_link_libraries(pastix
pastix_parsec
)
add_dependencies(pastix
parsec_headers_tgt
)
endif()
if(PASTIX_WITH_STARPU)
target_link_libraries(pastix
pastix_starpu
)
add_dependencies(pastix
starpu_headers_tgt
)
endif()
if (PASTIX_BLEND_GENTRACE)
target_link_libraries(pastix
${GTG_LIBRARIES}
)
endif()
# foreach (module2 ${modules})
# add_dependencies(pastix ${module2}_headers)
# endforeach()
install(TARGETS pastix
RUNTIME DESTINATION bin
ARCHIVE DESTINATION lib
LIBRARY DESTINATION lib)
# Install header files
set(PASTIX_HDRS
include/pastix/api.h
include/pastix/old_api.h
include/pastix/datatypes.h
include/pastix/order.h
graph/graph.h
include/cblas.h
include/lapacke.h
)
install(FILES
include/pastix.h
DESTINATION include )
install(FILES ${PASTIX_HDRS} DESTINATION include/pastix )
## Executable and tests
enable_testing()
include(CTest)
# Examples executables
add_subdirectory(example)
# Testing executables
add_subdirectory(test)
### Wrappers
add_subdirectory(wrappers)
### Build pkg-config and environment file
include(GenPkgConfig)
set(PASTIX_PKGCONFIG_LIBS pastix pastix_kernels)
# StarPU
if(PASTIX_WITH_STARPU)
list(APPEND PASTIX_PKGCONFIG_LIBS pastix_starpu)
if ( STARPU_FOUND_WITH_PKGCONFIG )
if ( PASTIX_WITH_MPI )
list(APPEND PASTIX_PKGCONFIG_REQUIRED starpumpi-${PASTIX_STARPU_VERSION})
else()
list(APPEND PASTIX_PKGCONFIG_REQUIRED starpu-${PASTIX_STARPU_VERSION})
endif()
else()
list(APPEND PASTIX_PKGCONFIG_LIBS_PRIVATE ${STARPU_LIBRARIES_DEP})
endif()
endif()
# PaRSEC
if(PASTIX_WITH_PARSEC)
list(APPEND PASTIX_PKGCONFIG_LIBS pastix_parsec)
if ( PARSEC_FOUND_WITH_PKGCONFIG )
list(APPEND PASTIX_PKGCONFIG_REQUIRED parsec)
else()
list(APPEND PASTIX_PKGCONFIG_LIBS_PRIVATE ${PARSEC_LIBRARIES_DEP})
endif()
endif()
if(PASTIX_WITH_CUDA)
list(APPEND PASTIX_PKGCONFIG_LIBS pastix_kernels_cuda)
endif()
if(PASTIX_WITH_EZTRACE)
list(APPEND PASTIX_PKGCONFIG_REQUIRED eztrace litl)
endif()
list(APPEND PASTIX_PKGCONFIG_INCS
)
list(APPEND PASTIX_PKGCONFIG_LIBS_PRIVATE
${LAPACKE_LIBRARIES_DEP}
${CBLAS_LIBRARIES_DEP}
)
list(APPEND PASTIX_PKGCONFIG_LIBS_PRIVATE
${EXTRA_LIBRARIES}
)
# HwLoc
if ( HWLOC_FOUND_WITH_PKGCONFIG )
list(APPEND PASTIX_PKGCONFIG_REQUIRED hwloc)
else()
list(APPEND PASTIX_PKGCONFIG_LIBS_PRIVATE ${HWLOC_LIBRARIES})
endif()
generate_pkgconfig_files(
"${CMAKE_CURRENT_SOURCE_DIR}/pastix.pc.in"
"${CMAKE_CURRENT_SOURCE_DIR}/pastixf.pc.in"
PROJECTNAME PASTIX )
generate_env_file( PROJECTNAME PASTIX )
#############################################################
#
# Build documentation
#
#############################################################
add_documented_files(
README.md
docs/doxygen/chapters/eztrace.doxy
docs/doxygen/chapters/thread_bindings.doxy
tools/binding_for_multimpi.c
kernels/pastix_lowrank.h
#
include/pastix.h
include/pastix/api.h
common/api.c
common/get_options.c
common/models.c
common/pastixdata.h
#
graph/graph.h
graph/graph.c
graph/graph_compute_kway.c
graph/graph_compute_projection.c
graph/graph_io.c
graph/graph_isolate.c
graph/graph_prepare.c
graph/graph_symmetrize.c
#
include/pastix/order.h
#order/order_scotch_strats.h TODO: include in developer version
order/order.c
order/order_add_isolate.c
order/order_amalgamate.c
order/order_apply_level_order.c
order/order_check.c
order/order_draw.c
order/order_find_supernodes.c
order/order_grids.c
order/order_io.c
order/order_compute_metis.c
order/order_compute_ptscotch.c
order/order_compute_scotch.c
order/order_supernodes.c
order/pastix_subtask_order.c
#