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antsCorticalThicknessExample

  • antsCorticalThicknessCommand.sh -- cortical thickness using T1 only.
  • antsCorticalThicknessT1andT2Command.sh -- cortical thickness using pre-aligned T1 and T2.
  • antsCorticalThicknessStagesCommand.sh -- cortical thickness where each of the 5 major steps are done in stages (see help '-h').