diff --git a/src/ontology/imports/merged_import.owl b/src/ontology/imports/merged_import.owl index 47b8257..79944ba 100644 --- a/src/ontology/imports/merged_import.owl +++ b/src/ontology/imports/merged_import.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-10-31") + +Annotation(owl:versionInfo "2024-11-11") Declaration(Class()) Declaration(Class()) @@ -22796,7 +22796,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23242,7 +23241,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23308,7 +23306,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24088,7 +24085,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24351,7 +24347,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -26143,6 +26138,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -28470,6 +28468,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -31438,7 +31437,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -31726,6 +31724,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -32007,7 +32006,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -32391,7 +32389,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -32624,6 +32621,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33125,6 +33123,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33149,9 +33149,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33167,6 +33173,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33808,7 +33817,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33878,6 +33886,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34118,7 +34127,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34575,6 +34583,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34754,6 +34764,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34814,6 +34825,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34934,7 +34946,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -35115,6 +35126,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -35144,6 +35156,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -36195,6 +36208,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -39508,6 +39522,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -40282,6 +40297,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -40433,7 +40449,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -42203,6 +42218,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -43931,6 +43947,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -45332,6 +45349,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -55233,7 +55251,7 @@ AnnotationAssertion(rdfs:label "caus SubObjectPropertyOf( ) SubObjectPropertyOf( ) -# Object Property: (disease disrupts) +# Object Property: (disease causes disruption of) AnnotationAssertion( "A relationship between a disease and a process where the disease process disrupts the execution of the process.") AnnotationAssertion(rdfs:label "disease causes disruption of") @@ -227739,13 +227757,6 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (testicular granulosa cell tumor) - -AnnotationAssertion(rdfs:label "testicular granulosa cell tumor") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (testicular non-seminomatous germ cell cancer) AnnotationAssertion(rdfs:comment "Editor note: TODO owldef") @@ -231001,14 +231012,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (epilepsy, idiopathic generalized) - -AnnotationAssertion(rdfs:label "epilepsy, idiopathic generalized") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (esophageal squamous cell carcinoma) AnnotationAssertion(rdfs:label "esophageal squamous cell carcinoma") @@ -231500,14 +231503,6 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) -# Class: (granulosa cell tumor) - -AnnotationAssertion(rdfs:label "granulosa cell tumor") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (lactic acidosis) AnnotationAssertion(rdfs:label "lactic acidosis") @@ -234115,8 +234110,6 @@ SubClassOf( "peroxisomal disease") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuromuscular disease) @@ -237204,12 +237197,6 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ) -# Class: (ovarian granulosa cell tumor) - -AnnotationAssertion(rdfs:label "ovarian granulosa cell tumor") -SubClassOf( ) -SubClassOf( ) - # Class: (heavy metal poisoning) AnnotationAssertion(rdfs:label "heavy metal poisoning") @@ -239096,11 +239083,6 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "adolescent/adult-onset epilepsy syndrome") SubClassOf( ) -# Class: (metabolic epilepsy) - -AnnotationAssertion(rdfs:label "metabolic epilepsy") -SubClassOf( ) - # Class: (structural epilepsy) AnnotationAssertion(rdfs:label "structural epilepsy") @@ -246070,7 +246052,7 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "protein") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -247749,7 +247731,7 @@ SubClassOf( (interleukin-10) -AnnotationAssertion(rdfs:comment "Category=gene.") +AnnotationAssertion(rdfs:comment "Category=gene. Note: Active interleukin-10 inhibits the synthesis of a number of cytokines, including IFN-gamma, IL-2, IL-3, TNF and GM-CSF produced by activated macrophages and by helper T cells. Structurally, IL-10 is a protein of about 160 amino acids that contains four conserved cysteines involved in disulfide bonds.") AnnotationAssertion(rdfs:label "interleukin-10") SubClassOf( ) @@ -249109,6 +249091,26 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "lymphotactin") SubClassOf( ) +# Class: (CD14 molecule cleaved 1 soluble form) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 1 soluble form") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved 2 soluble form) + +AnnotationAssertion(rdfs:comment "Category=modification. Note: This form appears to derive from release of the GPI-anchored form, mCD14.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 soluble form") +SubClassOf( ) + +# Class: (CD14 molecule cleaved 2 GPI-anchored form) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 GPI-anchored form") +SubClassOf( ) + # Class: (NAD(P)(+)--arginine ADP-ribosyltransferase) AnnotationAssertion(rdfs:comment "Category=family.") @@ -250735,10 +250737,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "retinal dehydrogenase 2") SubClassOf( ) -# Class: (aldehyde dehydrogenase family 1 member A3) +# Class: (retinaldehyde dehydrogenase 3) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3") +AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3") SubClassOf( ) # Class: (aldehyde dehydrogenase X, mitochondrial) @@ -250765,10 +250767,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "succinate-semialdehyde dehydrogenase, mitochondrial") SubClassOf( ) -# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial) +# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial") SubClassOf( ) # Class: (alpha-aminoadipic semialdehyde dehydrogenase) @@ -256903,10 +256905,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "transcription factor E2F5") SubClassOf( ) -# Class: (testis-expressed protein 33) +# Class: (ciliary microtubule inner protein 4) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "testis-expressed protein 33") +AnnotationAssertion(rdfs:label "ciliary microtubule inner protein 4") SubClassOf( ) # Class: (receptor-binding cancer antigen expressed on SiSo cells) @@ -256945,10 +256947,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "extracellular matrix protein 1") SubClassOf( ) -# Class: (vesicular, overexpressed in cancer, prosurvival protein 1) +# Class: (WW domain binding protein VOPP1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "vesicular, overexpressed in cancer, prosurvival protein 1") +AnnotationAssertion(rdfs:label "WW domain binding protein VOPP1") SubClassOf( ) # Class: (endothelial cell-specific chemotaxis regulator) @@ -257059,10 +257061,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "embryonal Fyn-associated substrate") SubClassOf( ) -# Class: (pro-epidermal growth factor) +# Class: (pre-pro-epidermal growth factor) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "pro-epidermal growth factor") +AnnotationAssertion(rdfs:label "pre-pro-epidermal growth factor") SubClassOf( ) # Class: (protein eyes shut) @@ -257179,10 +257181,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "eukaryotic translation initiation factor 2-alpha kinase 3") SubClassOf( ) -# Class: (translation initiation factor eIF-2B subunit alpha) +# Class: (translation initiation factor eIF2B subunit alpha) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF-2B subunit alpha") +AnnotationAssertion(rdfs:label "translation initiation factor eIF2B subunit alpha") SubClassOf( ) # Class: (protein argonaute-1) @@ -257887,10 +257889,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "exosome complex component CSL4") SubClassOf( ) -# Class: (exosome component 10) +# Class: (exosome complex component 10) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "exosome component 10") +AnnotationAssertion(rdfs:label "exosome complex component 10") SubClassOf( ) # Class: (exosome complex component RRP40) @@ -258055,10 +258057,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 1") SubClassOf( ) -# Class: (Fas apoptotic inhibitory molecule 3) +# Class: (immunoglobulin mu Fc receptor) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 3") +AnnotationAssertion(rdfs:label "immunoglobulin mu Fc receptor") SubClassOf( ) # Class: (Fanconi anemia group F protein) @@ -258985,10 +258987,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible protein GADD45 beta") SubClassOf( ) -# Class: (growth arrest and DNA damage-inducible proteins-interacting protein 1) +# Class: (large ribosomal subunit protein mL64) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible proteins-interacting protein 1") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL64") SubClassOf( ) # Class: (G antigen 2B/2C) @@ -259694,10 +259696,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "guanine nucleotide-binding protein G(q) subunit alpha") SubClassOf( ) -# Class: (receptor of activated protein C kinase 1) +# Class: (small ribosomal subunit protein RACK1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1") SubClassOf( ) # Class: (bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase) @@ -260480,10 +260482,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "E3 ubiquitin-protein ligase HECW2") SubClassOf( ) -# Class: (hepatocyte cell adhesion molecule) +# Class: (hepatic and glial cell adhesion molecule) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "hepatocyte cell adhesion molecule") +AnnotationAssertion(rdfs:label "hepatic and glial cell adhesion molecule") SubClassOf( ) # Class: (hephaestin) @@ -260594,10 +260596,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "hedgehog-interacting protein") SubClassOf( ) -# Class: (HERV-H LTR-associating protein 3) +# Class: (putative uncharacterized protein ANKRD13C-DT) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "HERV-H LTR-associating protein 3") +AnnotationAssertion(rdfs:label "putative uncharacterized protein ANKRD13C-DT") SubClassOf( ) # Class: (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial) @@ -263072,6 +263074,12 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "lysyl oxidase homolog 3") SubClassOf( ) +# Class: (apolipoprotein(a)) + +AnnotationAssertion(rdfs:comment "Category=gene.") +AnnotationAssertion(rdfs:label "apolipoprotein(a)") +SubClassOf( ) + # Class: (lysophosphatidylcholine acyltransferase 2) AnnotationAssertion(rdfs:comment "Category=gene.") @@ -264578,106 +264586,106 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "rRNA methyltransferase 1, mitochondrial") SubClassOf( ) -# Class: (39S ribosomal protein L1, mitochondrial) +# Class: (large ribosomal subunit protein uL1m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m") SubClassOf( ) -# Class: (39S ribosomal protein L10, mitochondrial) +# Class: (large ribosomal subunit protein uL10m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m") SubClassOf( ) -# Class: (39S ribosomal protein L12, mitochondrial) +# Class: (large ribosomal subunit protein bL12m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L12, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL12m") SubClassOf( ) -# Class: (39S ribosomal protein L14, mitochondrial) +# Class: (large ribosomal subunit protein uL14m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m") SubClassOf( ) -# Class: (39S ribosomal protein L2, mitochondrial) +# Class: (large ribosomal subunit protein uL2m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m") SubClassOf( ) -# Class: (39S ribosomal protein L21, mitochondrial) +# Class: (large ribosomal subunit protein bL21m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L21, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL21m") SubClassOf( ) -# Class: (39S ribosomal protein L24, mitochondrial) +# Class: (large ribosomal subunit protein uL24m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m") SubClassOf( ) -# Class: (39S ribosomal protein L28, mitochondrial) +# Class: (large ribosomal subunit protein bL28m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L28, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL28m") SubClassOf( ) -# Class: (39S ribosomal protein L32, mitochondrial) +# Class: (large ribosomal subunit protein bL32m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L32, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL32m") SubClassOf( ) -# Class: (39S ribosomal protein L33, mitochondrial) +# Class: (large ribosomal subunit protein bL33m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L33, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL33m") SubClassOf( ) -# Class: (39S ribosomal protein L34, mitochondrial) +# Class: (large ribosomal subunit protein bL34m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L34, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL34m") SubClassOf( ) -# Class: (39S ribosomal protein L38, mitochondrial) +# Class: (large ribosomal subunit protein mL38) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L38, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL38") SubClassOf( ) -# Class: (39S ribosomal protein L46, mitochondrial) +# Class: (large ribosomal subunit protein mL46) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L46, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL46") SubClassOf( ) -# Class: (39S ribosomal protein L52, mitochondrial) +# Class: (large ribosomal subunit protein mL52) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L52, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL52") SubClassOf( ) -# Class: (39S ribosomal protein L55, mitochondrial) +# Class: (large ribosomal subunit protein mL55) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L55, mitochondrial") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL55") SubClassOf( ) -# Class: (28S ribosomal protein S14, mitochondrial) +# Class: (small ribosomal subunit protein uS14m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "28S ribosomal protein S14, mitochondrial") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS14m") SubClassOf( ) -# Class: (28S ribosomal protein S16, mitochondrial) +# Class: (small ribosomal subunit protein bS16m) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "28S ribosomal protein S16, mitochondrial") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein bS16m") SubClassOf( ) # Class: (ribosome-recycling factor, mitochondrial) @@ -265376,10 +265384,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nucleolin") SubClassOf( ) -# Class: (nicalin) +# Class: (BOS complex subunit NCLN) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nicalin") +AnnotationAssertion(rdfs:label "BOS complex subunit NCLN") SubClassOf( ) # Class: (nuclear receptor coactivator 2) @@ -265928,16 +265936,16 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nicotinamide N-methyltransferase") SubClassOf( ) -# Class: (nodal modulator 1) +# Class: (BOS complex subunit NOMO1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nodal modulator 1") +AnnotationAssertion(rdfs:label "BOS complex subunit NOMO1") SubClassOf( ) -# Class: (nodal modulator 2) +# Class: (BOS complex subunit NOMO2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nodal modulator 2") +AnnotationAssertion(rdfs:label "BOS complex subunit NOMO2") SubClassOf( ) # Class: (non-POU domain-containing octamer-binding protein) @@ -265958,16 +265966,16 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nucleolar protein 56") SubClassOf( ) -# Class: (nitric oxide synthase, brain) +# Class: (nitric oxide synthase 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, brain") +AnnotationAssertion(rdfs:label "nitric oxide synthase 1") SubClassOf( ) -# Class: (nitric oxide synthase, endothelial) +# Class: (nitric oxide synthase 3) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial") +AnnotationAssertion(rdfs:label "nitric oxide synthase 3") SubClassOf( ) # Class: (nitric oxide synthase-interacting protein) @@ -266162,10 +266170,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nuclear receptor 2C2-associated protein") SubClassOf( ) -# Class: (nuclear receptor subfamily 4 group A member 1) +# Class: (nuclear receptor subfamily 4 immunity group A member 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 group A member 1") +AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 immunity group A member 1") SubClassOf( ) # Class: (nuclear receptor subfamily 5 group A member 2) @@ -267494,16 +267502,16 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C") SubClassOf( ) -# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4A) +# Class: (3',5'-cyclic-AMP phosphodiesterase 4A) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4A") +AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4A") SubClassOf( ) -# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4C) +# Class: (3',5'-cyclic-AMP phosphodiesterase 4C) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4C") +AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4C") SubClassOf( ) # Class: (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta) @@ -268887,10 +268895,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "palmitoyl-protein thioesterase 1") SubClassOf( ) -# Class: (pancreatic prohormone) +# Class: (pancreatic polypeptide prohormone) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "pancreatic prohormone") +AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone") SubClassOf( ) # Class: (polyglutamine-binding protein 1) @@ -270393,10 +270401,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "regulator of chromosome condensation") SubClassOf( ) -# Class: (2'-deoxynucleoside 5'-phosphate N-hydrolase 1) +# Class: (5-hydroxymethyl-dUMP N-hydrolase) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "2'-deoxynucleoside 5'-phosphate N-hydrolase 1") +AnnotationAssertion(rdfs:label "5-hydroxymethyl-dUMP N-hydrolase") SubClassOf( ) # Class: (reticulocalbin-3) @@ -270495,11 +270503,11 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-alpha") SubClassOf( ) -# Class: (regenerating islet-derived protein 3-gamma) +# Class: (obsolete regenerating islet-derived protein 3-gamma) -AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma") -SubClassOf( ) +AnnotationAssertion(rdfs:comment "Category (was) gene. Made obsolete because this is one of a set of paralogs (that is, no 1:1 orthology is possible). Had archetype PR:Q6UW15.") +AnnotationAssertion(rdfs:label "obsolete regenerating islet-derived protein 3-gamma") +AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) # Class: (transcription factor RelB) @@ -271113,52 +271121,52 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "ribose-5-phosphate isomerase") SubClassOf( ) -# Class: (60S ribosomal protein L11) +# Class: (eukaryotic-type large ribosomal subunit protein uL5) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L11") +AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL5") SubClassOf( ) -# Class: (60S ribosomal protein L12) +# Class: (eukaryotic-type large ribosomal subunit protein uL11) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L12") +AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL11") SubClassOf( ) -# Class: (60S ribosomal protein L14) +# Class: (large ribosomal subunit protein eL14) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L14") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14") SubClassOf( ) -# Class: (60S ribosomal protein L26-like 1) +# Class: (ribosomal protein uL24-like) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L26-like 1") +AnnotationAssertion(rdfs:label "ribosomal protein uL24-like") SubClassOf( ) -# Class: (60S ribosomal protein L30) +# Class: (large ribosomal subunit protein eL30) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L30") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL30") SubClassOf( ) -# Class: (60S ribosomal protein L38) +# Class: (large ribosomal subunit protein eL38) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L38") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL38") SubClassOf( ) -# Class: (60S ribosomal protein L5) +# Class: (eukaryotic-type large ribosomal subunit protein uL18) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L5") +AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL18") SubClassOf( ) -# Class: (60S acidic ribosomal protein P2) +# Class: (large ribosomal subunit protein P2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "60S acidic ribosomal protein P2") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein P2") SubClassOf( ) # Class: (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2) @@ -271191,58 +271199,58 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "regulation of nuclear pre-mRNA domain-containing protein 1A") SubClassOf( ) -# Class: (40S ribosomal protein S10) +# Class: (small ribosomal subunit protein eS10) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S10") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS10") SubClassOf( ) -# Class: (40S ribosomal protein S12) +# Class: (small ribosomal subunit protein eS12) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S12") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12") SubClassOf( ) -# Class: (40S ribosomal protein S14) +# Class: (eukaryotic-type small ribosomal subunit protein uS11) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S14") +AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS11") SubClassOf( ) -# Class: (40S ribosomal protein S19) +# Class: (small ribosomal subunit protein eS19) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S19") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19") SubClassOf( ) -# Class: (40S ribosomal protein S20) +# Class: (eukaryotic-type small ribosomal subunit protein uS10) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S20") +AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS10") SubClassOf( ) -# Class: (40S ribosomal protein S25) +# Class: (small ribosomal subunit protein eS25) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S25") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS25") SubClassOf( ) -# Class: (40S ribosomal protein S3a) +# Class: (small ribosomal subunit protein eS1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S3a") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1") SubClassOf( ) -# Class: (40S ribosomal protein S4, X isoform) +# Class: (small ribosomal subunit protein eS4, X isoform) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4, X isoform") SubClassOf( ) -# Class: (40S ribosomal protein S5) +# Class: (eukaryotic-type small ribosomal subunit protein uS7) AnnotationAssertion(rdfs:comment "Category=gene. Pro-orthology refers to, in this case, after-speciation gene duplication in the non-human species (aka 1:many orthology).") -AnnotationAssertion(rdfs:label "40S ribosomal protein S5") +AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS7") SubClassOf( ) # Class: (ribosomal protein S6 kinase alpha-1) @@ -272607,10 +272615,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "ski-like protein") SubClassOf( ) -# Class: (SKI2 subunit of superkiller complex protein) +# Class: (superkiller complex protein 2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "SKI2 subunit of superkiller complex protein") +AnnotationAssertion(rdfs:label "superkiller complex protein 2") SubClassOf( ) # Class: (S-phase kinase-associated protein 2) @@ -272763,10 +272771,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "zinc transporter ZIP5") SubClassOf( ) -# Class: (neutral and basic amino acid transport protein rBAT) +# Class: (amino acid transporter heavy chain SLC3A1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "neutral and basic amino acid transport protein rBAT") +AnnotationAssertion(rdfs:label "amino acid transporter heavy chain SLC3A1") SubClassOf( ) # Class: (solute carrier family 41 member 2) @@ -273351,10 +273359,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "spermatogenesis-associated protein 22") SubClassOf( ) -# Class: (ribosome biogenesis protein SPATA5) +# Class: (ATPase family gene 2 protein homolog A) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "ribosome biogenesis protein SPATA5") +AnnotationAssertion(rdfs:label "ATPase family gene 2 protein homolog A") SubClassOf( ) # Class: (spermatogenesis-associated protein 9) @@ -275841,10 +275849,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "testis-specific Y-encoded-like protein 1") SubClassOf( ) -# Class: (protein TSSC4) +# Class: (U5 small nuclear ribonucleoprotein TSSC4) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "protein TSSC4") +AnnotationAssertion(rdfs:label "U5 small nuclear ribonucleoprotein TSSC4") SubClassOf( ) # Class: (testis-specific serine/threonine-protein kinase 1) @@ -276771,10 +276779,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "vitamin D3 receptor") SubClassOf( ) -# Class: (vascular endothelial growth factor A) +# Class: (vascular endothelial growth factor A, long form) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form") SubClassOf( ) # Class: (vascular endothelial growth factor C) @@ -279782,10 +279790,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (aldehyde dehydrogenase family 1 member A3, initiator methionine removed form) +# Class: (retinaldehyde dehydrogenase 3, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3, initiator methionine removed form") +AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -282074,15 +282082,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pro-epidermal growth factor proteolytic cleavage product) - -AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "pro-epidermal growth factor proteolytic cleavage product") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (epidermal growth factor receptor, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") @@ -283103,10 +283102,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (receptor of activated protein C kinase 1, initiator methionine removed form) +# Class: (small ribosomal subunit protein RACK1, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1, initiator methionine removed form") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -284454,6 +284453,14 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (apolipoprotein(a), signal peptide removed form) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "apolipoprotein(a), signal peptide removed form") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lipoprotein lipase, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") @@ -285225,10 +285232,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase, endothelial, initiator methionine removed form) +# Class: (nitric oxide synthase 3, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial, initiator methionine removed form") +AnnotationAssertion(rdfs:label "nitric oxide synthase 3, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -286189,18 +286196,18 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic prohormone, signal peptide removed form) +# Class: (pancreatic polypeptide prohormone, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "pancreatic prohormone, signal peptide removed form") +AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone, signal peptide removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic prohormone proteolytic cleavage product) +# Class: (pancreatic polypeptide prohormone proteolytic cleavage product) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "pancreatic prohormone proteolytic cleavage product") +AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone proteolytic cleavage product") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -286772,14 +286779,6 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regenerating islet-derived protein 3-gamma, signal peptide removed form) - -AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma, signal peptide removed form") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (tumor necrosis factor receptor superfamily member 19L, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") @@ -286862,26 +286861,26 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L11, initiator methionine removed form) +# Class: (eukaryotic-type large ribosomal subunit protein uL5, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L11, initiator methionine removed form") +AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL5, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L14, initiator methionine removed form) +# Class: (large ribosomal subunit protein eL14, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L14, initiator methionine removed form") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L5, initiator methionine removed form) +# Class: (eukaryotic-type large ribosomal subunit protein uL18, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L5, initiator methionine removed form") +AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL18, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -286902,66 +286901,66 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S12, initiator methionine removed form) +# Class: (small ribosomal subunit protein eS12, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S12, initiator methionine removed form") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S14, initiator methionine removed form) +# Class: (eukaryotic-type small ribosomal subunit protein uS11, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S14, initiator methionine removed form") +AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS11, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S19, initiator methionine removed form) +# Class: (small ribosomal subunit protein eS19, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S19, initiator methionine removed form") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S20, initiator methionine removed form) +# Class: (eukaryotic-type small ribosomal subunit protein uS10, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S20, initiator methionine removed form") +AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS10, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S3a, initiator methionine removed form) +# Class: (small ribosomal subunit protein eS1, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S3a, initiator methionine removed form") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S4, X isoform, initiator methionine removed form) +# Class: (small ribosomal subunit protein eS4, X isoform, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform, initiator methionine removed form") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4, X isoform, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S5, initiator methionine removed form) +# Class: (eukaryotic-type small ribosomal subunit protein uS7, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S5, initiator methionine removed form") +AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS7, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S5 proteolytic cleavage product) +# Class: (eukaryotic-type small ribosomal subunit protein uS7 proteolytic cleavage product) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S5 proteolytic cleavage product") +AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS7 proteolytic cleavage product") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -288344,10 +288343,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vascular endothelial growth factor A, signal peptide removed form) +# Class: (vascular endothelial growth factor A, long form, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, signal peptide removed form") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form, signal peptide removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -289484,10 +289483,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L26-like 1, initiator methionine removed form) +# Class: (ribosomal protein uL24-like, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L26-like 1, initiator methionine removed form") +AnnotationAssertion(rdfs:label "ribosomal protein uL24-like, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -289834,15 +289833,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (proteasome subunit alpha type-7, initiator methionine removed form (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "proteasome subunit alpha type-7, initiator methionine removed form (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (proteasome subunit beta type-3, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") @@ -290519,10 +290509,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "ER membrane protein complex subunit 4") SubClassOf( ) -# Class: (protein FAM102B) +# Class: (EEIG family member 2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "protein FAM102B") +AnnotationAssertion(rdfs:label "EEIG family member 2") SubClassOf( ) # Class: (protein FAM118B) @@ -291350,6 +291340,15 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "protein-glutamine gamma-glutamyltransferase") SubClassOf( ) +# Class: (CD14 molecule cleaved 2 soluble form (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 soluble form (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (A-kinase anchor protein 7 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -291596,10 +291595,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "transmembrane protein 119") SubClassOf( ) -# Class: (probable G-protein coupled receptor 158) +# Class: (metabotropic glycine receptor) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "probable G-protein coupled receptor 158") +AnnotationAssertion(rdfs:label "metabotropic glycine receptor") SubClassOf( ) # Class: (protein FAM162A) @@ -291740,10 +291739,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "C4b-binding protein alpha chain") SubClassOf( ) -# Class: (cell surface hyaluronidase) +# Class: (cell surface hyaluronidase CEMIP2) -AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "cell surface hyaluronidase") +AnnotationAssertion(rdfs:comment "Category=gene. Note: The human CEMIP2 is not active as a hyaluronidase, however the mouse ortholog is.") +AnnotationAssertion(rdfs:label "cell surface hyaluronidase CEMIP2") SubClassOf( ) # Class: (ER membrane protein complex subunit 1) @@ -291794,10 +291793,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "leucine-rich repeat-containing protein 38") SubClassOf( ) -# Class: (teratocarcinoma-derived growth factor 1) +# Class: (protein Cripto) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "teratocarcinoma-derived growth factor 1") +AnnotationAssertion(rdfs:label "protein Cripto") SubClassOf( ) # Class: (ubiquitin domain-containing protein 2) @@ -291818,10 +291817,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "COMM domain-containing protein 5") SubClassOf( ) -# Class: (putative chondrosarcoma-associated gene 1 protein) +# Class: (chondrosarcoma-associated gene 1 protein) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "putative chondrosarcoma-associated gene 1 protein") +AnnotationAssertion(rdfs:label "chondrosarcoma-associated gene 1 protein") SubClassOf( ) # Class: (transcription factor CP2-like protein 1) @@ -291962,10 +291961,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "transmembrane protein 8B") SubClassOf( ) -# Class: (WSC domain-containing protein 2) +# Class: (sialate:O-sulfotransferase 2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "WSC domain-containing protein 2") +AnnotationAssertion(rdfs:label "sialate:O-sulfotransferase 2") SubClassOf( ) # Class: (translational activator of cytochrome c oxidase 1) @@ -291986,10 +291985,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "palmitoyltransferase ZDHHC4") SubClassOf( ) -# Class: (cotranscriptional regulator FAM172A) +# Class: (cotranscriptional regulator ARB2A) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "cotranscriptional regulator FAM172A") +AnnotationAssertion(rdfs:label "cotranscriptional regulator ARB2A") SubClassOf( ) # Class: (myosin light chain 1/3, skeletal muscle isoform) @@ -292382,10 +292381,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "phenazine biosynthesis-like domain-containing protein") SubClassOf( ) -# Class: (adhesion G-protein coupled receptor F2) +# Class: (putative adhesion G protein-coupled receptor F2P) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "adhesion G-protein coupled receptor F2") +AnnotationAssertion(rdfs:label "putative adhesion G protein-coupled receptor F2P") SubClassOf( ) # Class: (regulation of nuclear pre-mRNA domain-containing protein 1B) @@ -294125,10 +294124,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "WAP four-disulfide core domain protein 10A") SubClassOf( ) -# Class: (acidic leucine-rich nuclear phosphoprotein 32 family member C) +# Class: (putative uncharacterized protein ANP32CP) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "acidic leucine-rich nuclear phosphoprotein 32 family member C") +AnnotationAssertion(rdfs:label "putative uncharacterized protein ANP32CP") SubClassOf( ) # Class: (spermatogenesis-associated protein 24) @@ -294386,6 +294385,24 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "BUB1/BUB1B protein") SubClassOf( ) +# Class: (CD14 molecule cleaved 2 GPI-anchored form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 GPI-anchored form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved 2 soluble form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 soluble form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (GSK3-like glycogen synthase kinase) AnnotationAssertion(rdfs:comment "Category=family.") @@ -294582,6 +294599,42 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (CD14 molecule cleaved 1 soluble form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 1 soluble form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved 2) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved and soluble form) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved and soluble form") +EquivalentClasses( ObjectUnionOf( )) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved and soluble form (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved and soluble form (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectUnionOf( )) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neurexin-2-beta) AnnotationAssertion(rdfs:comment "Category=seqgroup.") @@ -294603,6 +294656,26 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (CD14 molecule cleaved and soluble form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved and soluble form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectUnionOf( )) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved 2 (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectUnionOf( )) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (T-cell surface glycoprotein CD1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-family. Requested by=IEDB. Requested by=ImmPort.") @@ -294727,6 +294800,34 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (CD14 molecule cleaved 1 soluble form (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification. Note: The coordinates of the soluble form shown in the example were added based on similarity to the human soluble form corresponding to PR:000002146 [PRO:DAN].") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 1 soluble form (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved 2 GPI-anchored form (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification. Note: The coordinates of the GPI-anchored form shown are based on similarity to the human anchored form PR:000035702 [PRO:DAN].") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 GPI-anchored form (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (CD14 molecule cleaved 2 (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectUnionOf( )) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (Toll-like receptor 3, signal peptide removed form (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-modification. Evidence=(ECO:0000250, based on PR:000037305).") @@ -295828,10 +295929,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)) +# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -298267,11 +298368,12 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pro-epidermal growth factor, signal peptide removed form (human)) +# Class: (pro-epidermal growth factor (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "pro-epidermal growth factor, signal peptide removed form (human)") +AnnotationAssertion(rdfs:label "pro-epidermal growth factor (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -300596,16 +300698,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (Ras GTPase-activating-like protein IQGAP2, initiator methionine removed form (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "Ras GTPase-activating-like protein IQGAP2, initiator methionine removed form (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (integrin alpha-11, signal peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") @@ -301250,6 +301342,16 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (apolipoprotein(a), signal peptide removed form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "apolipoprotein(a), signal peptide removed form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lipoprotein lipase, signal peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") @@ -301798,19 +301900,19 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L1, mitochondrial, transit peptide removed form (human)) +# Class: (large ribosomal subunit protein uL1m, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L10, mitochondrial, transit peptide removed form (human)) +# Class: (large ribosomal subunit protein uL10m, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -301825,19 +301927,19 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L14, mitochondrial, transit peptide removed form (human)) +# Class: (large ribosomal subunit protein uL14m, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L2, mitochondrial, transit peptide removed form (human)) +# Class: (large ribosomal subunit protein uL2m, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -301852,10 +301954,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L24, mitochondrial, transit peptide removed form (human)) +# Class: (large ribosomal subunit protein uL24m, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -302116,10 +302218,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (probable asparagine--tRNA ligase, mitochondrial, transit peptide removed form (human)) +# Class: (asparaginyl-tRNA synthetase, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "probable asparagine--tRNA ligase, mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "asparaginyl-tRNA synthetase, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -302393,10 +302495,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase, endothelial, initiator methionine removed form (human)) +# Class: (nitric oxide synthase 3, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial, initiator methionine removed form (human)") +AnnotationAssertion(rdfs:label "nitric oxide synthase 3, initiator methionine removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -303505,15 +303607,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (peptidyl-tRNA hydrolase 2, mitochondrial, transit peptide removed form (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "peptidyl-tRNA hydrolase 2, mitochondrial, transit peptide removed form (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (pyrroline-5-carboxylate reductase 1, mitochondrial, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") @@ -303790,10 +303883,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L5, initiator methionine removed form (human)) +# Class: (large ribosomal subunit protein uL18, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L5, initiator methionine removed form (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL18, initiator methionine removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -306614,14 +306707,6 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "hemoglobin subunit") SubClassOf( ) -# Class: (protein-containing material entity) - -AnnotationAssertion(rdfs:comment "Note: This includes single proteins and derivatives thereof (PR:000000001), protein-containing complexes (GO:0032991), and protein aggregates (PR:000050566).") -AnnotationAssertion(rdfs:label "protein-containing material entity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (spermatogenesis-associated protein 33) AnnotationAssertion(rdfs:comment "Category=gene.") @@ -306717,10 +306802,10 @@ AnnotationAssertion(rdfs:label "po EquivalentClasses( ObjectUnionOf( )) SubClassOf( ) -# Class: (protein Frey) +# Class: (protein Frey 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "protein Frey") +AnnotationAssertion(rdfs:label "protein Frey 1") SubClassOf( ) # Class: (protein FAM229A) @@ -306777,10 +306862,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "single-pass membrane and coiled-coil domain-containing protein 1") SubClassOf( ) -# Class: (HUWE1-associated protein modifying stress responses) +# Class: (HUWE1-associated protein modifying stress responses 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses") +AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses 1") SubClassOf( ) # Class: (UPF0561 protein C2orf68) @@ -306789,10 +306874,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "UPF0561 protein C2orf68") SubClassOf( ) -# Class: (UPF0692 protein C19orf54) +# Class: (actin maturation protease) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "UPF0692 protein C19orf54") +AnnotationAssertion(rdfs:label "actin maturation protease") SubClassOf( ) # Class: (spermatogenesis-associated protein 46) @@ -307313,6 +307398,22 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectExactCardinality(1 )) +# Class: (pro-epidermal growth factor) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "pro-epidermal growth factor") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (protein-containing molecular entity) + +AnnotationAssertion(rdfs:comment "Note: This includes single proteins and derivatives thereof (PR:000000001), protein-containing complexes (GO:0032991), and protein aggregates (PR:000050565).") +AnnotationAssertion(rdfs:label "protein-containing molecular entity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (protein GPR15LG (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -307392,10 +307493,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (Fas apoptotic inhibitory molecule 3 (mouse)) +# Class: (immunoglobulin mu Fc receptor (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 3 (mouse)") +AnnotationAssertion(rdfs:label "immunoglobulin mu Fc receptor (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -308909,15 +309010,24 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein Frey (human)) +# Class: (protein Frey 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein Frey (human)") +AnnotationAssertion(rdfs:label "protein Frey 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (protein FAM151B (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "protein FAM151B (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (solute carrier family 35 member G2 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -309053,10 +309163,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (WSC domain-containing protein 2 (mouse)) +# Class: (sialate:O-sulfotransferase 2 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "WSC domain-containing protein 2 (mouse)") +AnnotationAssertion(rdfs:label "sialate:O-sulfotransferase 2 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -309454,6 +309564,15 @@ AnnotationAssertion(rdfs:label "coile SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (actin maturation protease (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "actin maturation protease (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (thrombospondin-type laminin G domain and EAR repeat-containing protein (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -310532,15 +310651,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regenerating islet-derived protein 3-gamma (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (guanylate cyclase activator 2B (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -312161,6 +312271,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pro-neuregulin-3, membrane-bound isoform (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "pro-neuregulin-3, membrane-bound isoform (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (class E basic helix-loop-helix protein 40 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -312422,6 +312541,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (X-box-binding protein 1 (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "X-box-binding protein 1 (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (DNA-directed RNA polymerase III subunit RPC9 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -312953,10 +313081,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (testis-expressed protein 33 (human)) +# Class: (ciliary microtubule inner protein 4 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "testis-expressed protein 33 (human)") +AnnotationAssertion(rdfs:label "ciliary microtubule inner protein 4 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -313160,10 +313288,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (acidic leucine-rich nuclear phosphoprotein 32 family member C (human)) +# Class: (putative uncharacterized protein ANP32CP (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "acidic leucine-rich nuclear phosphoprotein 32 family member C (human)") +AnnotationAssertion(rdfs:label "putative uncharacterized protein ANP32CP (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -313385,10 +313513,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (human)) +# Class: (5-hydroxymethyl-dUMP N-hydrolase (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (human)") +AnnotationAssertion(rdfs:label "5-hydroxymethyl-dUMP N-hydrolase (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -314862,10 +314990,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (Fas apoptotic inhibitory molecule 3 (human)) +# Class: (immunoglobulin mu Fc receptor (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 3 (human)") +AnnotationAssertion(rdfs:label "immunoglobulin mu Fc receptor (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -314979,10 +315107,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (28S ribosomal protein S14, mitochondrial (human)) +# Class: (small ribosomal subunit protein uS14m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "28S ribosomal protein S14, mitochondrial (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS14m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -316068,10 +316196,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L33, mitochondrial (human)) +# Class: (large ribosomal subunit protein bL33m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L33, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL33m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -316482,10 +316610,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cell division cycle protein 123 homolog (human)) +# Class: (translation initiation factor eIF2 assembly protein (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cell division cycle protein 123 homolog (human)") +AnnotationAssertion(rdfs:label "translation initiation factor eIF2 assembly protein (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -317607,10 +317735,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4A (mouse)) +# Class: (3',5'-cyclic-AMP phosphodiesterase 4A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4A (mouse)") +AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4A (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -319252,10 +319380,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pro-epidermal growth factor (human)) +# Class: (pre-pro-epidermal growth factor (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "pro-epidermal growth factor (human)") +AnnotationAssertion(rdfs:label "pre-pro-epidermal growth factor (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -319441,10 +319569,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic prohormone (human)) +# Class: (pancreatic polypeptide prohormone (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "pancreatic prohormone (human)") +AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -320790,10 +320918,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S acidic ribosomal protein P2 (human)) +# Class: (large ribosomal subunit protein P2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S acidic ribosomal protein P2 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein P2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -321870,6 +321998,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (apolipoprotein(a) (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "apolipoprotein(a) (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neurofilament light polypeptide (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -323298,10 +323435,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic prohormone (mouse)) +# Class: (pancreatic polypeptide prohormone (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "pancreatic prohormone (mouse)") +AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -324477,10 +324614,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (teratocarcinoma-derived growth factor 1 (human)) +# Class: (protein Cripto (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "teratocarcinoma-derived growth factor 1 (human)") +AnnotationAssertion(rdfs:label "protein Cripto (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -325396,10 +325533,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vascular endothelial growth factor A (human)) +# Class: (vascular endothelial growth factor A, long form (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A (human)") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -328142,10 +328279,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nuclear receptor subfamily 4 group A member 1 (human)) +# Class: (nuclear receptor subfamily 4 immunity group A member 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 group A member 1 (human)") +AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 immunity group A member 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -328880,10 +329017,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S12 (human)) +# Class: (small ribosomal subunit protein eS12 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S12 (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -329555,10 +329692,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4A (human)) +# Class: (3',5'-cyclic-AMP phosphodiesterase 4A (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4A (human)") +AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4A (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -330177,19 +330314,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase, endothelial (human)) +# Class: (nitric oxide synthase 3 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial (human)") +AnnotationAssertion(rdfs:label "nitric oxide synthase 3 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase, brain (human)) +# Class: (nitric oxide synthase 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, brain (human)") +AnnotationAssertion(rdfs:label "nitric oxide synthase 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -330357,10 +330494,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L12 (human)) +# Class: (large ribosomal subunit protein uL11 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L12 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL11 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -332076,10 +332213,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L12 (mouse)) +# Class: (large ribosomal subunit protein uL11 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L12 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL11 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -332463,10 +332600,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S19 (human)) +# Class: (small ribosomal subunit protein eS19 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S19 (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -334047,19 +334184,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L5 (human)) +# Class: (large ribosomal subunit protein uL18 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L5 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL18 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S10 (human)) +# Class: (small ribosomal subunit protein eS10 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S10 (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS10 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -334299,10 +334436,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (aldehyde dehydrogenase family 1 member A3 (human)) +# Class: (retinaldehyde dehydrogenase 3 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3 (human)") +AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -334362,10 +334499,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L5 (mouse)) +# Class: (large ribosomal subunit protein uL18 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L5 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL18 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -335892,10 +336029,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L14 (human)) +# Class: (large ribosomal subunit protein eL14 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L14 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -336765,10 +336902,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L12, mitochondrial (human)) +# Class: (large ribosomal subunit protein bL12m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L12, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL12m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -338403,10 +338540,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (exosome component 10 (mouse)) +# Class: (exosome complex component 10 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "exosome component 10 (mouse)") +AnnotationAssertion(rdfs:label "exosome complex component 10 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -339162,19 +339299,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S20 (human)) +# Class: (small ribosomal subunit protein uS10 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S20 (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS10 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S20 (mouse)) +# Class: (small ribosomal subunit protein uS10 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S20 (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS10 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -339504,10 +339641,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S3a (human)) +# Class: (small ribosomal subunit protein eS1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S3a (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340035,19 +340172,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S14 (human)) +# Class: (small ribosomal subunit protein uS11 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S14 (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS11 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S14 (mouse)) +# Class: (small ribosomal subunit protein uS11 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S14 (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS11 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340242,19 +340379,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S4, X isoform (human)) +# Class: (small ribosomal subunit protein eS4, X isoform (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4, X isoform (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S4, X isoform (mouse)) +# Class: (small ribosomal subunit protein eS4 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340413,19 +340550,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S25 (human)) +# Class: (small ribosomal subunit protein eS25 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S25 (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS25 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S25 (mouse)) +# Class: (small ribosomal subunit protein eS25 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S25 (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS25 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340440,28 +340577,28 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L30 (human)) +# Class: (large ribosomal subunit protein eL30 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L30 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL30 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L30 (mouse)) +# Class: (large ribosomal subunit protein eL30 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L30 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL30 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L11 (human)) +# Class: (large ribosomal subunit protein uL5 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L11 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL5 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340755,10 +340892,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L38 (human)) +# Class: (large ribosomal subunit protein eL38 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L38 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL38 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340809,10 +340946,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (receptor of activated protein C kinase 1 (human)) +# Class: (small ribosomal subunit protein RACK1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1 (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340863,19 +341000,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S12 (mouse)) +# Class: (small ribosomal subunit protein eS12 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S12 (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S10 (mouse)) +# Class: (small ribosomal subunit protein eS10 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S10 (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS10 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340908,10 +341045,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (receptor of activated protein C kinase 1 (mouse)) +# Class: (small ribosomal subunit protein RACK1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1 (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -341196,10 +341333,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase, endothelial (mouse)) +# Class: (nitric oxide synthase 3 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial (mouse)") +AnnotationAssertion(rdfs:label "nitric oxide synthase 3 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -342213,10 +342350,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S3a (mouse)) +# Class: (small ribosomal subunit protein eS1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S3a (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343005,10 +343142,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S acidic ribosomal protein P2 (mouse)) +# Class: (large ribosomal subunit protein P2 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S acidic ribosomal protein P2 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein P2 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343239,10 +343376,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vascular endothelial growth factor A (mouse)) +# Class: (vascular endothelial growth factor A, long form (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A (mouse)") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343543,10 +343680,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (exosome component 10 (human)) +# Class: (exosome complex component 10 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "exosome component 10 (human)") +AnnotationAssertion(rdfs:label "exosome complex component 10 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343696,10 +343833,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)) +# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -344875,10 +345012,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (neutral and basic amino acid transport protein rBAT (human)) +# Class: (amino acid transporter heavy chain SLC3A1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "neutral and basic amino acid transport protein rBAT (human)") +AnnotationAssertion(rdfs:label "amino acid transporter heavy chain SLC3A1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -345055,10 +345192,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4C (human)) +# Class: (3',5'-cyclic-AMP phosphodiesterase 4C (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4C (human)") +AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4C (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -346090,10 +346227,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L28, mitochondrial (human)) +# Class: (large ribosomal subunit protein bL28m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L28, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL28m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -347305,10 +347442,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (peptidyl-tRNA hydrolase ICT1, mitochondrial (human)) +# Class: (large ribosomal subunit protein mL62 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "peptidyl-tRNA hydrolase ICT1, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL62 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -347359,10 +347496,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (translation initiation factor eIF-2B subunit alpha (human)) +# Class: (translation initiation factor eIF2B subunit alpha (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF-2B subunit alpha (human)") +AnnotationAssertion(rdfs:label "translation initiation factor eIF2B subunit alpha (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -348106,19 +348243,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (HUWE1-associated protein modifying stress responses (human)) +# Class: (HUWE1-associated protein modifying stress responses 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses (human)") +AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (hepatocyte cell adhesion molecule (human)) +# Class: (hepatic and glial cell adhesion molecule (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "hepatocyte cell adhesion molecule (human)") +AnnotationAssertion(rdfs:label "hepatic and glial cell adhesion molecule (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -348383,10 +348520,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nodal modulator 1 (human)) +# Class: (BOS complex subunit NOMO1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nodal modulator 1 (human)") +AnnotationAssertion(rdfs:label "BOS complex subunit NOMO1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -348662,10 +348799,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (SKI2 subunit of superkiller complex protein (human)) +# Class: (superkiller complex protein 2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "SKI2 subunit of superkiller complex protein (human)") +AnnotationAssertion(rdfs:label "superkiller complex protein 2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -350094,10 +350231,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (WSC domain-containing protein 2 (human)) +# Class: (sialate:O-sulfotransferase 2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "WSC domain-containing protein 2 (human)") +AnnotationAssertion(rdfs:label "sialate:O-sulfotransferase 2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -350508,10 +350645,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L10, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein uL10m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -350688,10 +350825,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cotranscriptional regulator FAM172A (mouse)) +# Class: (cotranscriptional regulator ARB2A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cotranscriptional regulator FAM172A (mouse)") +AnnotationAssertion(rdfs:label "cotranscriptional regulator ARB2A (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -351102,10 +351239,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4C (mouse)) +# Class: (3',5'-cyclic-AMP phosphodiesterase 4C (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4C (mouse)") +AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4C (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -351381,10 +351518,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ribosome biogenesis protein SPATA5 (mouse)) +# Class: (ATPase family gene 2 protein homolog A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ribosome biogenesis protein SPATA5 (mouse)") +AnnotationAssertion(rdfs:label "ATPase family gene 2 protein homolog A (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -351669,6 +351806,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (sperm-associated antigen 11B (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "sperm-associated antigen 11B (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (calpain-13 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -352756,10 +352902,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (UPF0692 protein C19orf54 (human)) +# Class: (actin maturation protease (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "UPF0692 protein C19orf54 (human)") +AnnotationAssertion(rdfs:label "actin maturation protease (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353206,10 +353352,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nodal modulator 2 (human)) +# Class: (BOS complex subunit NOMO2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nodal modulator 2 (human)") +AnnotationAssertion(rdfs:label "BOS complex subunit NOMO2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353836,10 +353982,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L2, mitochondrial (human)) +# Class: (large ribosomal subunit protein uL2m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353890,10 +354036,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (probable G-protein coupled receptor 158 (human)) +# Class: (metabotropic glycine receptor (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "probable G-protein coupled receptor 158 (human)") +AnnotationAssertion(rdfs:label "metabotropic glycine receptor (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353908,10 +354054,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein FAM102B (human)) +# Class: (EEIG family member 2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein FAM102B (human)") +AnnotationAssertion(rdfs:label "EEIG family member 2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -356878,10 +357024,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (hepatocyte cell adhesion molecule (mouse)) +# Class: (hepatic and glial cell adhesion molecule (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "hepatocyte cell adhesion molecule (mouse)") +AnnotationAssertion(rdfs:label "hepatic and glial cell adhesion molecule (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -358631,6 +358777,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (superkiller complex protein 2 (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "superkiller complex protein 2 (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (zinc finger CCHC domain-containing protein 8 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -358694,10 +358849,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L14, mitochondrial (human)) +# Class: (large ribosomal subunit protein uL14m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -359234,10 +359389,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (putative chondrosarcoma-associated gene 1 protein (human)) +# Class: (chondrosarcoma-associated gene 1 protein (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "putative chondrosarcoma-associated gene 1 protein (human)") +AnnotationAssertion(rdfs:label "chondrosarcoma-associated gene 1 protein (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -359988,15 +360143,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regenerating islet-derived protein 3-gamma (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (sperm equatorial segment protein 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -362167,10 +362313,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L21, mitochondrial (human)) +# Class: (large ribosomal subunit protein bL21m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L21, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL21m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -362572,10 +362718,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L55, mitochondrial (human)) +# Class: (large ribosomal subunit protein mL55 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L55, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL55 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -362608,10 +362754,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L10, mitochondrial (human)) +# Class: (large ribosomal subunit protein uL10m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -363076,10 +363222,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (mouse)) +# Class: (5-hydroxymethyl-dUMP N-hydrolase (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (mouse)") +AnnotationAssertion(rdfs:label "5-hydroxymethyl-dUMP N-hydrolase (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -363994,10 +364140,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L52, mitochondrial (human)) +# Class: (large ribosomal subunit protein mL52 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L52, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL52 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -365074,10 +365220,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (probable asparagine--tRNA ligase, mitochondrial (mouse)) +# Class: (asparaginyl-tRNA synthetase (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "probable asparagine--tRNA ligase, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "asparaginyl-tRNA synthetase (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -366370,10 +366516,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein FAM102B (mouse)) +# Class: (EEIG family member 2 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein FAM102B (mouse)") +AnnotationAssertion(rdfs:label "EEIG family member 2 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -367882,10 +368028,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (probable G-protein coupled receptor 158 (mouse)) +# Class: (metabotropic glycine receptor (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "probable G-protein coupled receptor 158 (mouse)") +AnnotationAssertion(rdfs:label "metabotropic glycine receptor (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -369142,10 +369288,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cell division cycle protein 123 homolog (mouse)) +# Class: (translation initiation factor eIF2 assembly protein (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cell division cycle protein 123 homolog (mouse)") +AnnotationAssertion(rdfs:label "translation initiation factor eIF2 assembly protein (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -370166,10 +370312,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (adhesion G-protein coupled receptor F2 (human)) +# Class: (putative adhesion G protein-coupled receptor F2P (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "adhesion G-protein coupled receptor F2 (human)") +AnnotationAssertion(rdfs:label "putative adhesion G protein-coupled receptor F2P (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -370949,10 +371095,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L38, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein mL38 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L38, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL38 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -372531,10 +372677,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ribosome biogenesis protein SPATA5 (human)) +# Class: (ATPase family gene 2 protein homolog A (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ribosome biogenesis protein SPATA5 (human)") +AnnotationAssertion(rdfs:label "ATPase family gene 2 protein homolog A (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -373420,10 +373566,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (peptidyl-tRNA hydrolase ICT1, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein mL62 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "peptidyl-tRNA hydrolase ICT1, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL62 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -373690,10 +373836,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vesicular, overexpressed in cancer, prosurvival protein 1 (mouse)) +# Class: (WW domain binding protein VOPP1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "vesicular, overexpressed in cancer, prosurvival protein 1 (mouse)") +AnnotationAssertion(rdfs:label "WW domain binding protein VOPP1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -374617,10 +374763,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (growth arrest and DNA damage-inducible proteins-interacting protein 1 (human)) +# Class: (large ribosomal subunit protein mL64 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible proteins-interacting protein 1 (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL64 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -375684,10 +375830,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nicalin (mouse)) +# Class: (BOS complex subunit NCLN (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nicalin (mouse)") +AnnotationAssertion(rdfs:label "BOS complex subunit NCLN (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -375900,6 +376046,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (ETS-related transcription factor Elf-5 (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "ETS-related transcription factor Elf-5 (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ADP-dependent glucokinase (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -376582,10 +376737,10 @@ AnnotationAssertion(rdfs:label "cance SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cotranscriptional regulator FAM172A (human)) +# Class: (cotranscriptional regulator ARB2A (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cotranscriptional regulator FAM172A (human)") +AnnotationAssertion(rdfs:label "cotranscriptional regulator ARB2A (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -378036,10 +378191,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (neutral and basic amino acid transport protein rBAT (mouse)) +# Class: (amino acid transporter heavy chain SLC3A1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "neutral and basic amino acid transport protein rBAT (mouse)") +AnnotationAssertion(rdfs:label "amino acid transporter heavy chain SLC3A1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -380340,10 +380495,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nicalin (human)) +# Class: (BOS complex subunit NCLN (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nicalin (human)") +AnnotationAssertion(rdfs:label "BOS complex subunit NCLN (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -380439,10 +380594,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L24, mitochondrial (human)) +# Class: (large ribosomal subunit protein uL24m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -380601,10 +380756,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vesicular, overexpressed in cancer, prosurvival protein 1 (human)) +# Class: (WW domain binding protein VOPP1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "vesicular, overexpressed in cancer, prosurvival protein 1 (human)") +AnnotationAssertion(rdfs:label "WW domain binding protein VOPP1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -381123,10 +381278,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L38, mitochondrial (human)) +# Class: (large ribosomal subunit protein mL38 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L38, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL38 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -381760,10 +381915,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (probable asparagine--tRNA ligase, mitochondrial (human)) +# Class: (asparaginyl-tRNA synthetase (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "probable asparagine--tRNA ligase, mitochondrial (human)") +AnnotationAssertion(rdfs:label "asparaginyl-tRNA synthetase (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -384342,10 +384497,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (translation initiation factor eIF-2B subunit alpha (mouse)) +# Class: (translation initiation factor eIF2B subunit alpha (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF-2B subunit alpha (mouse)") +AnnotationAssertion(rdfs:label "translation initiation factor eIF2B subunit alpha (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -384756,19 +384911,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L34, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein bL34m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L34, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL34m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L1, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein uL1m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -385071,10 +385226,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L34, mitochondrial (human)) +# Class: (large ribosomal subunit protein bL34m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L34, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL34m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -386520,19 +386675,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L32, mitochondrial (human)) +# Class: (large ribosomal subunit protein bL32m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L32, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL32m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L1, mitochondrial (human)) +# Class: (large ribosomal subunit protein uL1m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387069,10 +387224,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (28S ribosomal protein S16, mitochondrial (mouse)) +# Class: (small ribosomal subunit protein bS16m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "28S ribosomal protein S16, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein bS16m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387123,10 +387278,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L24, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein uL24m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387528,10 +387683,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L33, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein bL33m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L33, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL33m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387834,19 +387989,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L14 (mouse)) +# Class: (large ribosomal subunit protein eL14 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L14 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (growth arrest and DNA damage-inducible proteins-interacting protein 1 (mouse)) +# Class: (large ribosomal subunit protein mL64 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible proteins-interacting protein 1 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL64 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387897,10 +388052,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (28S ribosomal protein S14, mitochondrial (mouse)) +# Class: (small ribosomal subunit protein uS14m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "28S ribosomal protein S14, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS14m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -388464,10 +388619,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L11 (mouse)) +# Class: (large ribosomal subunit protein uL5 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L11 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL5 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -388716,10 +388871,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L55, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein mL55 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L55, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL55 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -388932,10 +389087,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (40S ribosomal protein S19 (mouse)) +# Class: (small ribosomal subunit protein eS19 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "40S ribosomal protein S19 (mouse)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389193,10 +389348,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L52, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein mL52 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L52, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL52 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389283,10 +389438,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L28, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein bL28m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L28, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL28m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389391,10 +389546,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L14, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein uL14m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389454,10 +389609,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L21, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein bL21m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L21, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL21m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -390264,10 +390419,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L2, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein uL2m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -390858,10 +391013,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (testis-expressed protein 33 (mouse)) +# Class: (ciliary microtubule inner protein 4 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "testis-expressed protein 33 (mouse)") +AnnotationAssertion(rdfs:label "ciliary microtubule inner protein 4 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -391209,10 +391364,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L12, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein bL12m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L12, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL12m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -391443,6 +391598,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (ubiquitin-like modifier-activating enzyme 7 (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "ubiquitin-like modifier-activating enzyme 7 (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -391722,10 +391886,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L32, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein bL32m (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L32, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL32m (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -392100,10 +392264,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)) +# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -392199,10 +392363,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L46, mitochondrial (mouse)) +# Class: (large ribosomal subunit protein mL46 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L46, mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL46 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -393594,10 +393758,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (39S ribosomal protein L46, mitochondrial (human)) +# Class: (large ribosomal subunit protein mL46 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "39S ribosomal protein L46, mitochondrial (human)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL46 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -395269,10 +395433,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein TSSC4 (mouse)) +# Class: (U5 small nuclear ribonucleoprotein TSSC4 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein TSSC4 (mouse)") +AnnotationAssertion(rdfs:label "U5 small nuclear ribonucleoprotein TSSC4 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -395467,10 +395631,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (aldehyde dehydrogenase family 1 member A3 (mouse)) +# Class: (retinaldehyde dehydrogenase 3 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3 (mouse)") +AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -395791,10 +395955,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L38 (mouse)) +# Class: (large ribosomal subunit protein eL38 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L38 (mouse)") +AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL38 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -401816,10 +401980,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cell surface hyaluronidase (human)) +# Class: (inactive cell surface hyaluronidase CEMIP2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cell surface hyaluronidase (human)") +AnnotationAssertion(rdfs:label "inactive cell surface hyaluronidase CEMIP2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -403310,10 +403474,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (60S ribosomal protein L26-like 1 (human)) +# Class: (ribosomal protein uL24-like (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "60S ribosomal protein L26-like 1 (human)") +AnnotationAssertion(rdfs:label "ribosomal protein uL24-like (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -404048,6 +404212,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (C-C motif chemokine 17 (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "C-C motif chemokine 17 (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (protein FAM50A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -404453,10 +404626,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (HERV-H LTR-associating protein 3 (human)) +# Class: (putative uncharacterized protein ANKRD13C-DT (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "HERV-H LTR-associating protein 3 (human)") +AnnotationAssertion(rdfs:label "putative uncharacterized protein ANKRD13C-DT (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -405155,10 +405328,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (28S ribosomal protein S16, mitochondrial (human)) +# Class: (small ribosomal subunit protein bS16m (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "28S ribosomal protein S16, mitochondrial (human)") +AnnotationAssertion(rdfs:label "small ribosomal subunit protein bS16m (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -405740,10 +405913,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein TSSC4 (human)) +# Class: (U5 small nuclear ribonucleoprotein TSSC4 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein TSSC4 (human)") +AnnotationAssertion(rdfs:label "U5 small nuclear ribonucleoprotein TSSC4 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -406415,10 +406588,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase, brain (mouse)) +# Class: (nitric oxide synthase 1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase, brain (mouse)") +AnnotationAssertion(rdfs:label "nitric oxide synthase 1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) diff --git a/src/patterns/data/default/entity_attribute_location.tsv b/src/patterns/data/default/entity_attribute_location.tsv index d7fba5b..e0123a1 100644 --- a/src/patterns/data/default/entity_attribute_location.tsv +++ b/src/patterns/data/default/entity_attribute_location.tsv @@ -7056,3 +7056,4 @@ OBA:2051959 level of neuroendocrine secretory protein 55 isoform Nesp55 (human) OBA:2051960 level of immunoglobulin lambda constant 2 (human) in blood PR:P0DOY2 immunoglobulin lambda constant 2 (human) PATO:0000070 amount UBERON:0000178 blood PMID:37794183 https://orcid.org/0000-0001-6757-4744 OBA:2051961 level of progesterone-induced-blocking factor 1 (human) in blood PR:Q8WXW3 progesterone-induced-blocking factor 1 (human) PATO:0000070 amount UBERON:0000178 blood PMID:37794183 https://orcid.org/0000-0001-6757-4744 OBA:2051962 level of plexin-B1 in blood PR:000012896 plexin-B1 PATO:0000070 amount UBERON:0000178 blood PMID:34857772 https://orcid.org/0000-0001-6757-4744 +OBA:2051965 PR:000009888 apolipoprotein(a) PATO:0000070 amount UBERON:0000178 blood PMID:36959364 https://orcid.org/0000-0001-6757-4744 diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index b967e0b..f1de43e 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-10-31") + +Annotation(owl:versionInfo "2024-11-11") Declaration(Class()) Declaration(Class()) @@ -14197,6 +14197,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -19357,6 +19358,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -66004,9 +66006,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of aldehyde dehydrogenase family 1 member A3 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a aldehyde dehydrogenase family 1 member A3 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a retinaldehyde dehydrogenase 3 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum aldehyde dehydrogenase family 1 member A3 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum retinaldehyde dehydrogenase 3 amount") AnnotationAssertion(rdfs:label "level of aldehyde dehydrogenase family 1 member A3 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -66044,9 +66046,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial amount") AnnotationAssertion(rdfs:label "level of methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -72780,9 +72782,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of vesicular, overexpressed in cancer, prosurvival protein 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a vesicular, overexpressed in cancer, prosurvival protein 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a WW domain binding protein VOPP1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum vesicular, overexpressed in cancer, prosurvival protein 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum WW domain binding protein VOPP1 amount") AnnotationAssertion(rdfs:label "level of vesicular, overexpressed in cancer, prosurvival protein 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -73036,9 +73038,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of translation initiation factor eIF-2B subunit alpha in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a translation initiation factor eIF-2B subunit alpha when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a translation initiation factor eIF2B subunit alpha when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum translation initiation factor eIF-2B subunit alpha amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum translation initiation factor eIF2B subunit alpha amount") AnnotationAssertion(rdfs:label "level of translation initiation factor eIF-2B subunit alpha in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -73884,9 +73886,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of Fas apoptotic inhibitory molecule 3 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a Fas apoptotic inhibitory molecule 3 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a immunoglobulin mu Fc receptor when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum Fas apoptotic inhibitory molecule 3 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum immunoglobulin mu Fc receptor amount") AnnotationAssertion(rdfs:label "level of Fas apoptotic inhibitory molecule 3 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -74732,9 +74734,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of growth arrest and DNA damage-inducible proteins-interacting protein 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a growth arrest and DNA damage-inducible proteins-interacting protein 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL64 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum growth arrest and DNA damage-inducible proteins-interacting protein 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL64 amount") AnnotationAssertion(rdfs:label "level of growth arrest and DNA damage-inducible proteins-interacting protein 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -75516,9 +75518,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of receptor of activated protein C kinase 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a receptor of activated protein C kinase 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein RACK1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum receptor of activated protein C kinase 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein RACK1 amount") AnnotationAssertion(rdfs:label "level of receptor of activated protein C kinase 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -76367,9 +76369,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of hepatocyte cell adhesion molecule in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a hepatocyte cell adhesion molecule when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a hepatic and glial cell adhesion molecule when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum hepatocyte cell adhesion molecule amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum hepatic and glial cell adhesion molecule amount") AnnotationAssertion(rdfs:label "level of hepatocyte cell adhesion molecule in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -76503,9 +76505,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of HERV-H LTR-associating protein 3 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a HERV-H LTR-associating protein 3 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative uncharacterized protein ANKRD13C-DT when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum HERV-H LTR-associating protein 3 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative uncharacterized protein ANKRD13C-DT amount") AnnotationAssertion(rdfs:label "level of HERV-H LTR-associating protein 3 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -80879,113 +80881,113 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 39S ribosomal protein L1, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L1, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL1m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L1, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL1m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L1, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L10, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L10, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL10m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L10, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL10m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L10, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L12, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L12, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL12m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L12, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL12m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L12, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L14, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L14, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL14m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L14, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL14m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L14, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L2, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L2, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL2m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L2, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL2m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L2, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L21, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L21, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL21m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L21, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL21m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L21, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L28, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L28, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL28m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L28, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL28m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L28, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L32, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L32, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL32m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L32, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL32m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L32, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L33, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L33, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL33m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L33, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL33m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L33, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L34, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L34, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL34m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L34, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL34m amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L34, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L38, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L38, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL38 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L38, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL38 amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L38, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L52, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L52, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL52 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L52, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL52 amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L52, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L55, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L55, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL55 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L55, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL55 amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L55, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 28S ribosomal protein S14, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 28S ribosomal protein S14, mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein uS14m when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 28S ribosomal protein S14, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein uS14m amount") AnnotationAssertion(rdfs:label "level of 28S ribosomal protein S14, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -82343,9 +82345,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nodal modulator 2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nodal modulator 2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NOMO2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nodal modulator 2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum BOS complex subunit NOMO2 amount") AnnotationAssertion(rdfs:label "level of nodal modulator 2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -82367,9 +82369,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nitric oxide synthase, endothelial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase, endothelial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase 3 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nitric oxide synthase, endothelial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nitric oxide synthase 3 amount") AnnotationAssertion(rdfs:label "level of nitric oxide synthase, endothelial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -82567,9 +82569,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nuclear receptor subfamily 4 group A member 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nuclear receptor subfamily 4 group A member 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nuclear receptor subfamily 4 immunity group A member 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nuclear receptor subfamily 4 group A member 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nuclear receptor subfamily 4 immunity group A member 1 amount") AnnotationAssertion(rdfs:label "level of nuclear receptor subfamily 4 group A member 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -84071,17 +84073,17 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cAMP-specific 3',5'-cyclic phosphodiesterase 4A in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cAMP-specific 3',5'-cyclic phosphodiesterase 4A when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 3',5'-cyclic-AMP phosphodiesterase 4A when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cAMP-specific 3',5'-cyclic phosphodiesterase 4A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 3',5'-cyclic-AMP phosphodiesterase 4A amount") AnnotationAssertion(rdfs:label "level of cAMP-specific 3',5'-cyclic phosphodiesterase 4A in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of cAMP-specific 3',5'-cyclic phosphodiesterase 4C in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cAMP-specific 3',5'-cyclic phosphodiesterase 4C when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 3',5'-cyclic-AMP phosphodiesterase 4C when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cAMP-specific 3',5'-cyclic phosphodiesterase 4C amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 3',5'-cyclic-AMP phosphodiesterase 4C amount") AnnotationAssertion(rdfs:label "level of cAMP-specific 3',5'-cyclic phosphodiesterase 4C in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -87263,9 +87265,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 5-hydroxymethyl-dUMP N-hydrolase when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 5-hydroxymethyl-dUMP N-hydrolase amount") AnnotationAssertion(rdfs:label "level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -87375,9 +87377,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of regenerating islet-derived protein 3-gamma in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a regenerating islet-derived protein 3-gamma when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a obsolete regenerating islet-derived protein 3-gamma when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum regenerating islet-derived protein 3-gamma amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum obsolete regenerating islet-derived protein 3-gamma amount") AnnotationAssertion(rdfs:label "level of regenerating islet-derived protein 3-gamma in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -88055,57 +88057,57 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 60S ribosomal protein L11 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L11 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type large ribosomal subunit protein uL5 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L11 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type large ribosomal subunit protein uL5 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L11 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L12 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L12 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type large ribosomal subunit protein uL11 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L12 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type large ribosomal subunit protein uL11 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L12 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L26-like 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L26-like 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ribosomal protein uL24-like when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L26-like 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum ribosomal protein uL24-like amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L26-like 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L30 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L30 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein eL30 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L30 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein eL30 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L30 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L38 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L38 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein eL38 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L38 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein eL38 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L38 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L5 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L5 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type large ribosomal subunit protein uL18 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L5 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type large ribosomal subunit protein uL18 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L5 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S acidic ribosomal protein P2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S acidic ribosomal protein P2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein P2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S acidic ribosomal protein P2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein P2 amount") AnnotationAssertion(rdfs:label "level of 60S acidic ribosomal protein P2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -88151,65 +88153,65 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 40S ribosomal protein S12 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S12 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS12 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S12 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS12 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S12 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S14 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S14 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type small ribosomal subunit protein uS11 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S14 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type small ribosomal subunit protein uS11 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S14 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S19 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S19 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS19 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S19 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS19 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S19 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S20 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S20 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type small ribosomal subunit protein uS10 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S20 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type small ribosomal subunit protein uS10 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S20 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S25 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S25 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS25 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S25 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS25 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S25 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S3a in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S3a when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S3a amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS1 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S3a in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S4, X isoform in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S4, X isoform when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS4, X isoform when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S4, X isoform amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS4, X isoform amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S4, X isoform in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S5 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S5 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type small ribosomal subunit protein uS7 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S5 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type small ribosomal subunit protein uS7 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S5 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -89791,9 +89793,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of neutral and basic amino acid transport protein rBAT in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a neutral and basic amino acid transport protein rBAT when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a amino acid transporter heavy chain SLC3A1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum neutral and basic amino acid transport protein rBAT amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum amino acid transporter heavy chain SLC3A1 amount") AnnotationAssertion(rdfs:label "level of neutral and basic amino acid transport protein rBAT in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -90463,9 +90465,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of ribosome biogenesis protein SPATA5 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ribosome biogenesis protein SPATA5 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ATPase family gene 2 protein homolog A when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum ribosome biogenesis protein SPATA5 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum ATPase family gene 2 protein homolog A amount") AnnotationAssertion(rdfs:label "level of ribosome biogenesis protein SPATA5 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -93119,9 +93121,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of protein TSSC4 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein TSSC4 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a U5 small nuclear ribonucleoprotein TSSC4 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein TSSC4 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum U5 small nuclear ribonucleoprotein TSSC4 amount") AnnotationAssertion(rdfs:label "level of protein TSSC4 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -94271,9 +94273,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of vascular endothelial growth factor A in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a vascular endothelial growth factor A when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a vascular endothelial growth factor A, long form when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum vascular endothelial growth factor A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum vascular endothelial growth factor A, long form amount") AnnotationAssertion(rdfs:label "level of vascular endothelial growth factor A in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -95847,9 +95849,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of protein FAM102B in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein FAM102B when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a EEIG family member 2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein FAM102B amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum EEIG family member 2 amount") AnnotationAssertion(rdfs:label "level of protein FAM102B in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -96919,9 +96921,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cell surface hyaluronidase in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase CEMIP2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cell surface hyaluronidase amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cell surface hyaluronidase CEMIP2 amount") AnnotationAssertion(rdfs:label "level of cell surface hyaluronidase in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -96991,9 +96993,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of putative chondrosarcoma-associated gene 1 protein in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative chondrosarcoma-associated gene 1 protein when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a chondrosarcoma-associated gene 1 protein when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative chondrosarcoma-associated gene 1 protein amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum chondrosarcoma-associated gene 1 protein amount") AnnotationAssertion(rdfs:label "level of putative chondrosarcoma-associated gene 1 protein in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -97159,9 +97161,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of WSC domain-containing protein 2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a WSC domain-containing protein 2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a sialate:O-sulfotransferase 2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum WSC domain-containing protein 2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum sialate:O-sulfotransferase 2 amount") AnnotationAssertion(rdfs:label "level of WSC domain-containing protein 2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -97191,9 +97193,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cotranscriptional regulator FAM172A in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator FAM172A when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator ARB2A when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cotranscriptional regulator FAM172A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cotranscriptional regulator ARB2A amount") AnnotationAssertion(rdfs:label "level of cotranscriptional regulator FAM172A in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -97607,9 +97609,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of adhesion G-protein coupled receptor F2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a adhesion G-protein coupled receptor F2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative adhesion G protein-coupled receptor F2P when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum adhesion G-protein coupled receptor F2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative adhesion G protein-coupled receptor F2P amount") AnnotationAssertion(rdfs:label "level of adhesion G-protein coupled receptor F2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -99671,9 +99673,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of acidic leucine-rich nuclear phosphoprotein 32 family member C in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a acidic leucine-rich nuclear phosphoprotein 32 family member C when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative uncharacterized protein ANP32CP when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum acidic leucine-rich nuclear phosphoprotein 32 family member C amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative uncharacterized protein ANP32CP amount") AnnotationAssertion(rdfs:label "level of acidic leucine-rich nuclear phosphoprotein 32 family member C in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -100055,9 +100057,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of protein Frey in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein Frey when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein Frey 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein Frey amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein Frey 1 amount") AnnotationAssertion(rdfs:label "level of protein Frey in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -100119,9 +100121,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of HUWE1-associated protein modifying stress responses in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a HUWE1-associated protein modifying stress responses when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a HUWE1-associated protein modifying stress responses 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum HUWE1-associated protein modifying stress responses amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum HUWE1-associated protein modifying stress responses 1 amount") AnnotationAssertion(rdfs:label "level of HUWE1-associated protein modifying stress responses in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -100135,9 +100137,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of UPF0692 protein C19orf54 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a UPF0692 protein C19orf54 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a actin maturation protease when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum UPF0692 protein C19orf54 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum actin maturation protease amount") AnnotationAssertion(rdfs:label "level of UPF0692 protein C19orf54 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -101015,9 +101017,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nodal modulator 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nodal modulator 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NOMO1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nodal modulator 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum BOS complex subunit NOMO1 amount") AnnotationAssertion(rdfs:label "level of nodal modulator 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -105475,8 +105477,8 @@ EquivalentClasses( ObjectIntersectio # Class: (vascular endothelial growth factor A amount) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a vascular endothelial growth factor A.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of vascular endothelial growth factor A") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a vascular endothelial growth factor A, long form.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of vascular endothelial growth factor A, long form") AnnotationAssertion(rdfs:label "vascular endothelial growth factor A amount") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -105776,8 +105778,8 @@ EquivalentClasses( ObjectIntersectio # Class: (teratocarcinoma-derived growth factor 1 amount) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a teratocarcinoma-derived growth factor 1.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of teratocarcinoma-derived growth factor 1") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a protein Cripto.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of protein Cripto") AnnotationAssertion(rdfs:label "teratocarcinoma-derived growth factor 1 amount") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -110876,10 +110878,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nitric oxide synthase, endothelial in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase, endothelial when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase 3 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase, endothelial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase 3 amount") AnnotationAssertion(rdfs:label "level of nitric oxide synthase, endothelial in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -111650,10 +111652,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 5-hydroxymethyl-dUMP N-hydrolase when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 5-hydroxymethyl-dUMP N-hydrolase amount") AnnotationAssertion(rdfs:label "level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113063,10 +113065,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cell surface hyaluronidase in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase CEMIP2 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cell surface hyaluronidase amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cell surface hyaluronidase CEMIP2 amount") AnnotationAssertion(rdfs:label "level of cell surface hyaluronidase in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113090,10 +113092,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cotranscriptional regulator FAM172A in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator FAM172A when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator ARB2A when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cotranscriptional regulator FAM172A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cotranscriptional regulator ARB2A amount") AnnotationAssertion(rdfs:label "level of cotranscriptional regulator FAM172A in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113504,10 +113506,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nodal modulator 1 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nodal modulator 1 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NOMO1 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nodal modulator 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood BOS complex subunit NOMO1 amount") AnnotationAssertion(rdfs:label "level of nodal modulator 1 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113711,10 +113713,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of pancreatic prohormone in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pancreatic prohormone when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pancreatic polypeptide prohormone when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:38565889") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pancreatic prohormone amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pancreatic polypeptide prohormone amount") AnnotationAssertion(rdfs:label "level of pancreatic prohormone in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -116177,10 +116179,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of ciliary microtubule inner protein 4 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a testis-expressed protein 33 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ciliary microtubule inner protein 4 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood testis-expressed protein 33 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood ciliary microtubule inner protein 4 amount") AnnotationAssertion(rdfs:label "level of ciliary microtubule inner protein 4 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -116204,10 +116206,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of pre-pro-epidermal growth factor in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pro-epidermal growth factor when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pre-pro-epidermal growth factor when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pro-epidermal growth factor amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pre-pro-epidermal growth factor amount") AnnotationAssertion(rdfs:label "level of pre-pro-epidermal growth factor in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -116384,10 +116386,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of exosome complex component 10 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a exosome component 10 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a exosome complex component 10 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood exosome component 10 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood exosome complex component 10 amount") AnnotationAssertion(rdfs:label "level of exosome complex component 10 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -117680,28 +117682,28 @@ EquivalentClasses( ObjectIntersectio # Class: (level of large ribosomal subunit protein uL24m in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L24, mitochondrial when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL24m when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 39S ribosomal protein L24, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood large ribosomal subunit protein uL24m amount") AnnotationAssertion(rdfs:label "level of large ribosomal subunit protein uL24m in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of large ribosomal subunit protein mL46 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L46, mitochondrial when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL46 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 39S ribosomal protein L46, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood large ribosomal subunit protein mL46 amount") AnnotationAssertion(rdfs:label "level of large ribosomal subunit protein mL46 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of small ribosomal subunit protein bS16m in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 28S ribosomal protein S16, mitochondrial when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein bS16m when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 28S ribosomal protein S16, mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood small ribosomal subunit protein bS16m amount") AnnotationAssertion(rdfs:label "level of small ribosomal subunit protein bS16m in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -117887,10 +117889,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of BOS complex subunit NCLN in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nicalin when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NCLN when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nicalin amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood BOS complex subunit NCLN amount") AnnotationAssertion(rdfs:label "level of BOS complex subunit NCLN in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -118049,10 +118051,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nitric oxide synthase 1 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase, brain when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase 1 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase, brain amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase 1 amount") AnnotationAssertion(rdfs:label "level of nitric oxide synthase 1 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -119111,19 +119113,19 @@ EquivalentClasses( ObjectIntersectio # Class: (level of large ribosomal subunit protein eL14 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L14 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein eL14 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 60S ribosomal protein L14 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood large ribosomal subunit protein eL14 amount") AnnotationAssertion(rdfs:label "level of large ribosomal subunit protein eL14 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of small ribosomal subunit protein eS10 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S10 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS10 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 40S ribosomal protein S10 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood small ribosomal subunit protein eS10 amount") AnnotationAssertion(rdfs:label "level of small ribosomal subunit protein eS10 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -119444,10 +119446,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of superkiller complex protein 2 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a SKI2 subunit of superkiller complex protein when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a superkiller complex protein 2 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood SKI2 subunit of superkiller complex protein amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood superkiller complex protein 2 amount") AnnotationAssertion(rdfs:label "level of superkiller complex protein 2 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -120695,10 +120697,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of metabotropic glycine receptor in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a probable G-protein coupled receptor 158 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a metabotropic glycine receptor when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood probable G-protein coupled receptor 158 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood metabotropic glycine receptor amount") AnnotationAssertion(rdfs:label "level of metabotropic glycine receptor in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -121510,6 +121512,15 @@ AnnotationAssertion( "age of onset of isolated dystonia") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (amount of apolipoprotein(a) in blood) + +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a apolipoprotein(a) when measured in blood.") +AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") +AnnotationAssertion( "PMID:36959364") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood apolipoprotein(a) amount") +AnnotationAssertion(rdfs:label "amount of apolipoprotein(a) in blood") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) + # Class: (aggressive behavior towards inanimate objects rate) AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a aggressive behavior towards inanimate objects.")