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Create a basic Upheno toolkit for bioinformaticians #909

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matentzn opened this issue Mar 17, 2023 · 0 comments
Open

Create a basic Upheno toolkit for bioinformaticians #909

matentzn opened this issue Mar 17, 2023 · 0 comments

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@matentzn
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This will be mostly a wrapper around OAK and SSSOm toolkit.

The idea is to go from an input set (like a set of genes) and successively build a knowledge graph around it to link it with phenio, applying mappings, g2p links etc. Then enrichment and path analysis.

Some resources to check:

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