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Handle obsolete fillers in ZP (December 2022) #50

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34 tasks done
Tracked by #54
matentzn opened this issue Dec 5, 2022 · 2 comments
Open
34 tasks done
Tracked by #54

Handle obsolete fillers in ZP (December 2022) #50

matentzn opened this issue Dec 5, 2022 · 2 comments

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@matentzn
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matentzn commented Dec 5, 2022 •
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Covered by ZFIN/zebrafish-anatomical-ontology#167

  • ZP:0139819 - "ZFA:0005943 increased process quality proteolysis, abnormal"
  • ZP:0142951 - "ZFA:0005945 decreased amount, abnormal"
  • ZP:0142952 - "ZFA:0005946 decreased amount, abnormal"
  • ZP:0142953 - "ZFA:0005947 decreased amount, abnormal"
  • ZP:0142954 - "ZFA:0005948 decreased amount, abnormal"
  • ZP:0143835 - "ZFA:0005951 absent, abnormal"
  • ZP:0143836 - "ZFA:0005951 agenesis, abnormal"
  • ZP:0143839 - "ZFA:0005954 normal amount, abnormal"
  • ZP:0144362 - "ZFA:0005947 mislocalised, abnormal"
  • ZP:0145095 - "ZFA:0005945 absent, abnormal"
  • ZP:0145266 - "ZFA:0005945 normal amount, abnormal"
  • ZP:0145267 - "ZFA:0005946 normal amount, abnormal"
  • ZP:0143830 - "ZFA:0005950 spatial pattern, abnormal"
  • ZP:0143047 - "cardiac ventricle has extra parts of type regenerating tissue ZFA:0005951, abnormal"
  • ZP:0143829 - "bulbus arteriosus lacks parts or has fewer parts of type ZFA:0005950, abnormal"
  • ZP:0143832 - "cardiac ventricle has fewer parts of type regenerating tissue ZFA:0005951, abnormal"
  • ZP:0143833 - "cardiac ventricle lacks all parts of type ZFA:0005954, abnormal"
  • ZP:0143909 - "cardiac ventricle lacks all parts of type regenerating tissue ZFA:0005951, abnormal"
  • ZP:0143911 - "cardiac ventricle lacks parts or has fewer parts of type ZFA:0005954, abnormal"
  • ZP:0144208 - "cone photoreceptor outer segment ZFA:0005945 morphology, abnormal"
  • ZP:0144209 - "cone photoreceptor outer segment ZFA:0005946 morphology, abnormal"
  • ZP:0144357 - "photoreceptor inner segment ZFA:0005947 increased distribution, abnormal"

Obsoleted by ZFIN

  • ZP:0002196 - "obsolete cell aging increased magnitude, abnormal"
  • ZP:0002277 - "obsolete cell aging decreased magnitude, abnormal"
  • ZP:0009026 - "obsolete animal organ senescence premature, abnormal"
  • ZP:0009491 - "GO:0006975 increased occurrence, abnormal"
  • ZP:0015427 - "obsolete cell aging magnitude, abnormal"
  • ZP:0020895 - "obsolete age-dependent general metabolic decline physiological state, abnormal"
  • ZP:0021774 - "obsolete protein ADP-ribosylation decreased occurrence, abnormal"
  • ZP:0130891 - "obsolete histone H2A-S139 phosphorylation increased occurrence, abnormal"
  • ZP:0142384 - "GO:0014024 delayed, abnormal"

Not covered by ZFIN/zebrafish-anatomical-ontology#167, not obsoleted
@matentzn
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matentzn commented Dec 5, 2022

Some of these will be covered by:

ZFIN/zebrafish-anatomical-ontology#167

@matentzn matentzn mentioned this issue Dec 5, 2022
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@ybradford
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@matentzn ZFA release will happen very very soon. maybe tomorrow? at latest end of next week.

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