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@USF-HII USF Health Informatics Institute

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    11 repositories

    • madeline

      Public archive
      Madeline Pedigree Drawing Engine Web Service (https://madeline.med.umich.edu/madeline/)
      Python
      •1•1•0•0•Updated Jul 25, 2024Jul 25, 2024

    • snptk-ng

      Public
      SNP Toolkit Next-Generation for NCBI JSON formatted dbSNP files
      Python
      •0•0•0•0•Updated Mar 19, 2024Mar 19, 2024

    • strides-human-wgs

      Public
      AWS STRIDES Human WGS Pilot Pipeline
      Python
      •0•0•0•0•Updated Aug 4, 2022Aug 4, 2022

    • DiscoverAD

      Public
      Discover Atypical Diabetes (AD) is a data mining framework for identifying and clustering endotypes of AD.
      diabetesrprogramming
      R
      •0•0•0•0•Updated Apr 19, 2022Apr 19, 2022

    • pub-teddy-human-wgs-telomere

      Public
      TEDDY Human WGS Telomere
      Python
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Feb 28, 2022Feb 28, 2022

    • usf-hii.github.io

      Public
      GitHub Pages for USF-HII
      Ruby
      •
      Other
      •0•0•0•0•Updated Aug 4, 2021Aug 4, 2021

    • hla-prs-toolkit

      Public
      Toolkit to aid generation of advanced Polygenic Risk Scores (PRS) including SNP-allele tagging and interaction models, especially in HLA. Developed and maintained by Seth Sharp ([email protected]).
      Python
      •
      GNU General Public License v3.0
      •5•0•0•0•Updated Mar 29, 2021Mar 29, 2021

    • snptk

      Public
      USF HII SNP Toolkit - Analyze and translate SNP entries using NCBI dbSNP and related databases
      Python
      •
      GNU General Public License v3.0
      •1•0•3•0•Updated Jun 26, 2020Jun 26, 2020

    • static-json-data

      Public
      0•0•0•0•Updated May 12, 2020May 12, 2020

    • hii_plink

      Public
      USF HII Plink Toolkit - Streamlines various plink command processes
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 27, 2020Jan 27, 2020

    • tabutil

      Public
      Command line utility providing operations on one or more tab-separated files formatted as matrices
      Python
      •0•0•1•0•Updated Nov 4, 2019Nov 4, 2019