Repositories list

• gwaspipe

  Public
  Python

  •2•0•0•0•Updated Jan 11, 2025Jan 11, 2025

• sumstats_load_pipeline_in_tiledb

  Public
  Python

  •0•0•0•0•Updated Jan 11, 2025Jan 11, 2025

• gwaslab

  Public
  A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/

  Python

  •

  GNU General Public License v3.0

  •27•0•0•0•Updated Jan 9, 2025Jan 9, 2025

• MR_instruments_selection

  Public
  R

  •0•0•2•0•Updated Jan 8, 2025Jan 8, 2025

• containers

  Public
  dockerdocker-containerbioinformatics-tool

  R

  •0•0•0•0•Updated Jan 8, 2025Jan 8, 2025

• pqtl_pipeline_finemap

  Public
  Fine mapping analysis within the pQTL pipeline project

  R

  •

  MIT License

  •0•0•12•2•Updated Jan 8, 2025Jan 8, 2025

• pqtl_pipeline

  Public
  Python

  •0•0•0•0•Updated Jan 7, 2025Jan 7, 2025

• pqtl_downstream

  Public
  R

  •0•0•1•0•Updated Dec 17, 2024Dec 17, 2024

• gwasstudio

  Public
  Python

  •0•0•0•0•Updated Dec 12, 2024Dec 12, 2024

• pqtl_locuszoom

  Public
  Regional association plot of the signals in the pQTL project

  Python

  •0•0•3•0•Updated Nov 25, 2024Nov 25, 2024

• meta_pipeline

  Public
  snakemakemetalmeta-analysis+ 1snakemake-pipeline

  Python

  •0•1•0•0•Updated Aug 2, 2024Aug 2, 2024

• pqtl-believe-interval

  Public
  Working space for Believe Interval projects analysis

  R

  •5•2•0•0•Updated Jul 22, 2024Jul 22, 2024

• pqtl_ldscore

  Public
  Python

  •0•0•0•0•Updated Jul 3, 2024Jul 3, 2024

• tiledb-benchmark

  Public
  Shell

  •0•1•0•0•Updated Jul 3, 2024Jul 3, 2024

• SnakeMake_canvas

  Public
  Makefile

  •0•0•0•0•Updated Jul 1, 2024Jul 1, 2024

• genomics_QC_pipeline

  Public
  Python

  •0•0•0•1•Updated Jul 1, 2024Jul 1, 2024

• gwas2vcf

  Public
  Convert GWAS summary statistics to VCF

  Python

  •

  MIT License

  •18•0•0•0•Updated May 11, 2023May 11, 2023

• jupyterlab_launcher

  Public
  Makefile

  •0•0•0•0•Updated Mar 16, 2023Mar 16, 2023