0.8.5

CHANGELOG:

Fixes in github publish workflow

0.8.4

CHANGELOG:

Several fixes in Manifest.in including renaming from Manifest.ini
This release is to test if github actions based pypi upload works

0.8.3

CHANGELOG:

Additions

Added two new vignettes. zarr_explanation vignettes integrated in toc tree. plotting vignette (thanks to @JohanRodhe) not integrated in toc yet.

Improvements

Bug fix in ZarrMerge. The bug caused omission of sample names in ids
Minor docstring fixes in DataStore.plot_layout by @JohanRodhe
FIxes in plots.shade_scatter by @JohanRodhe

0.8.2

CHANGELOG:

Fixes in setup.py and pyproject.toml to allow automated uploads to PyPi

0.8.1

CHANGELOG:

Improvements

Added some tests for readers, writers, metadata and datastore modules.
Improvements in H5adReader, LoomReader and ZarrMerge

0.8.0

CHANGELOG:

New features

Pytest based testing
Added circleCI based continuous integration of tests

Improvements

Improved Docstrings (thanks to @razofz)
Added support for grid plotting (thanks to @JohanRodhe)
Fixed issues with wget causing verbose output in vignettes

0.7.8: Minor release

CHANGELOG:

Improvements

DataStore.make_subset() was removed and its functionality ported towriters.ZarrSubset
OSFdownloader was updated to play well with Figshare account and show data sources

0.7.7: Bug fix release

CHANGELOG:

New versions of Dask (2021.04.0 upwards) have some issues that cause memory spikes in Scarf.
Hence, the requirement has been pinned to <=2021.03.01
The issue is being tracked here: dask/dask#7583

0.7.6: Bug fix release

CHANGELOG:

Fixed bugs in DataStore.make_graph() and AnnStream related to external/custom transformers

0.7.5: Minor release

CHANGELOG:

Improvements

DataStore.make_subset() and ZarrMerge() now support transfering filtering information.
Improved make_subset to prevent overwriting files
AnnStream now supports disabling dimension reduction
Fixed cropping of legends in plot_scatter()

New features

Added option to add external data reduction transformers. in DataStore.make_graph()
Added option in DataStore.make_graph() to plot elbow_plots of % variance explained by each component.