diff --git a/fig_gordon2017.png b/fig_gordon2017.png new file mode 100644 index 0000000..e1712eb Binary files /dev/null and b/fig_gordon2017.png differ diff --git a/fig_multiscale.png b/fig_multiscale.png new file mode 100644 index 0000000..1b83635 Binary files /dev/null and b/fig_multiscale.png differ diff --git a/functional_parcellation_intro.ipynb b/functional_parcellation_intro.ipynb index a09877c..ee1e0a5 100644 --- a/functional_parcellation_intro.ipynb +++ b/functional_parcellation_intro.ipynb @@ -58,7 +58,6 @@ } }, "source": [ - "\n", "
\n", "
\n", " \"\"\n", @@ -729,9 +728,8 @@ "source": [ "

Multiresolution parcellations

\n", "\n", - "Functional parcellations have been studied at multiple resolutions in the literature, e.g. (Kelly et al., 2012). \n", "
\n", - "\n", + "\n", "
" ] }, @@ -765,7 +763,7 @@ }, { "cell_type": "code", - "execution_count": 22, + "execution_count": 24, "metadata": { "slideshow": { "slide_type": "-" @@ -817,10 +815,10 @@ "\" width=\"600\" height=\"270.0\" frameBorder=\"0\">" ], "text/plain": [ - "" + "" ] }, - "execution_count": 22, + "execution_count": 24, "metadata": {}, "output_type": "execute_result" } @@ -846,7 +844,7 @@ }, { "cell_type": "code", - "execution_count": 23, + "execution_count": 25, "metadata": {}, "outputs": [ { @@ -894,10 +892,10 @@ "\" width=\"600\" height=\"270.0\" frameBorder=\"0\">" ], "text/plain": [ - "" + "" ] }, - "execution_count": 23, + "execution_count": 25, "metadata": {}, "output_type": "execute_result" } @@ -1008,6 +1006,64 @@ "plotting.plot_stat_map(conn_map, display_mode='x', cut_coords=(2, ), threshold=0.5, vmax=1, \n", " title=\"voxel fcMRI map (PCC)\", axes=plt.subplot(1, 4, 4), colorbar=False)" ] + }, + { + "cell_type": "markdown", + "metadata": { + "slideshow": { + "slide_type": "slide" + } + }, + "source": [ + "

Group reproducibility

\n", + "With large, homogeneous groups, group-level parcellations reproduce closely. Figure adapted from Yeo, Krienen et al. 2011.\n", + "
\n", + "\n", + "
" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "slideshow": { + "slide_type": "subslide" + } + }, + "source": [ + "
\n", + "
\n", + " \"\"\n", + "
\n", + "
\n", + "

Individual parcels

\n", + " \n", + " For ten densely sampled individuals (10 runs of 30 mns resting-state over ten days) identify details in individual parcellations that cannot be observed at the level of group parcellations (indicated by arrows, group parcellation at the top). \n", + " \n", + "
\n", + "
" + ] + }, + { + "cell_type": "markdown", + "metadata": { + "slideshow": { + "slide_type": "subslide" + } + }, + "source": [ + "
\n", + "
\n", + "

Individual reproducibility

\n", + " \n", + " For ten densely sampled individuals (10 runs of 30 mns resting-state over ten days) identify details in individual parcellations that cannot be observed at the level of group parcellations (indicated by arrows, group parcellation at the top). \n", + " \n", + "
\n", + "
\n", + " \"\"\n", + "
\n", + " \n", + "
" + ] } ], "metadata": { diff --git a/repro_gordon2017.png b/repro_gordon2017.png new file mode 100644 index 0000000..6f59550 Binary files /dev/null and b/repro_gordon2017.png differ diff --git a/repro_yeo_krienen.png b/repro_yeo_krienen.png new file mode 100644 index 0000000..923697b Binary files /dev/null and b/repro_yeo_krienen.png differ